pycom13g24060

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
21321594 .. 21323520
1927 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g24060.4

Sequence Viewer

Length: 1563 bp
ATGACAAATTTATCCATATTTCTTCATTGGCTCCATCGACTCAACCTAATGGATTTTCTACAAAACTGGGATTTTCTGTATTGTTTCCAGACTGCCACTGGTACAAACAAGAAGAATTATTCTTTAGATTTACTTTCATTTCGTGAGGTGGGTTTCTCTAGGATTTCCAAAGCATTGAATTTGGATCAGTTGTCCTTGGATTTTGATGGCCTTGAAGGCCTCATAGCAAAAAGGAAGAAGAATGATGAGAGAGAACAACCTCACGAGGCTTCGACGGAGATGGAAGACGAAGCATTGCTGTCATTGTTGCTACTACGAACGTTGATGGCATTAAGATCTCATAGTGGATTTCGAGGGCTCTGCCCCTTTAGTTTCTTCTTGTTCACCATCACCAGTGGCGGTGCTAGAGATGAAGCTTGGTTTGAAACCAAACTAGCACTCATTTGCTGGGATTGGGTTAGCCATAGTTGGGTTGCTAGGTTTGTGGTGGAGAAGGATGAGGCTACAAGAGAGAGGGAGGGTAGAAGGAAGGGAGGCGACGGGAAAGAAATGAGGGTAGATAGTGGAATTAATGAAAAAGATGAGGGGTGGAACAAGTCACTCCAGGGGGAGAGGTGGAACGAAAATTTAGTCAAAACTCGTTCCGTGGAACAGTGCACTCCACGCATTTTAGGCACACCAAACGTGGGACGGAACGCCTCGTCCTACTGCGTTCTGTCCCATCCCATGTACCAAACGGTACATAAGGGCACAAGTGTAAGTTTGTCATGTAAACCTTTATATGTGGAAATGGATTTTAATAAACTAAATAATCGACTACATGCTTGTAATACATCATTACATAATCACCAAGCTCAACACCTCAACAAATGCTCCTTCGCTAGCACCACAAAGAATGGATGGTCCTTGAAGCACTTGGTTAGATGGATCCTCTGCCAGAACTCGATTAGTAGATGGAGTACCCATAAAATCAGAAGCCGAAGATGCATAAAGTTGTGGCTGTTTCTTCAAAAGCCCAATAGGATACAGAAGCTTGTCGCAAATTCTCTTAAACCGAAGAAGCGAGATCAACAGTCTCTGATGTCTTGGTCAGAATCACCTTCAGAACGCTTGCTCAGTTTCATTCTTCCTCTTCTTCTTCTCTACTCCAGATGCATCTTCACAACGTTTTGGAAGCCTCAAAGCATCCTGGGCCGTAACCCACACGGGGTTAAGTACAGGATTGTTATAGCAGACGTTCGTGATGTCATCTTTCACTCCCACTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCCAATGCACTGCTCTATTTCCAACTCTGATGTAGACATCTATTTTGTAATTGATGTCGCTTCCAAGCTTACAAGGAACTCTCAGTTCAGATATATCACCATCCCAGTTCCCCTCCACCAAAACAATGTCCTTATACCAATACTTGTCCTGACCAGGAAGGTTTATGATGTAAGCAGGCTACCGAAGCGTAGATCAAGATTAAAAGAAATAATGAGTATCGGTGCTCTTCCGGAATGTGTCAAGAACGCAAAATTCAAATAA

Protein Analysis

521

Amino Acids

60.1

Weight (kDa)

9.7

Isoelectric Point (pI)

43.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1335
AccIII TCCGGA 1 cut(s) 1531
AciI CCGC 1 cut(s) 399
AclI AACGTT 2 cut(s) 320, 1166
AclWI GGATC 3 cut(s) 192, 922, 935
AcsI RAATTY 5 cut(s) 7, 178, 625, 1042, 1553
AcuI CTGAAG 1 cut(s) 1086
AfaI GTAC 5 cut(s) 103, 731, 741, 961, 1217
AfiI CCNNNNNNNGG 3 cut(s) 469, 686, 1207
AgsI TTSAA 6 cut(s) 178, 215, 425, 910, 1010, 1558
AjnI CCWGG 3 cut(s) 603, 1188, 1454
AloI GAACNNNNNNTCC 2 cut(s) 686, 718
AluBI AGCT 4 cut(s) 416, 854, 1033, 1369
AluI AGCT 4 cut(s) 416, 854, 1033, 1369
Alw21I GWGCWC 2 cut(s) 659, 1528
Alw26I GTCTC 1 cut(s) 1080
Alw44I GTGCAC 1 cut(s) 655
AlwI GGATC 3 cut(s) 192, 922, 935
AlwNI CAGNNNCTG 1 cut(s) 1078
Aor13HI TCCGGA 1 cut(s) 1531
AoxI GGCC 3 cut(s) 208, 217, 1192
ApaLI GTGCAC 1 cut(s) 655
ApoI RAATTY 5 cut(s) 7, 178, 625, 1042, 1553
ArsI GACNNNNNNTTYG 4 cut(s) 615, 647, 1328, 1360
AseI ATTAAT 1 cut(s) 570
AspS9I GGNCC 2 cut(s) 903, 1192
AsuHPI GGTGA 5 cut(s) 376, 382, 839, 1089, 1390
AsuNHI GCTAGC 1 cut(s) 881
AvaII GGWCC 1 cut(s) 903
BaeGI GKGCMC 2 cut(s) 659, 752
BamHI GGATCC 1 cut(s) 927
BanII GRGCYC 1 cut(s) 360
BauI CACGAG 1 cut(s) 263
BbsI GAAGAC 1 cut(s) 291
Bbv12I GWGCWC 2 cut(s) 659, 1528
BceAI ACGGC 1 cut(s) 1179
BcgI CGANNNNNNTGC 2 cut(s) 342, 376
BciT130I CCWGG 3 cut(s) 605, 1190, 1456
BciVI GTATCC 1 cut(s) 1017
BcoDI GTCTC 1 cut(s) 1080
BfaI CTAG 5 cut(s) 159, 405, 434, 477, 882
BfuI GTATCC 1 cut(s) 1017
BglI GCCNNNNNGGC 1 cut(s) 216
BglII AGATCT 1 cut(s) 335
Bme1390I CCNGG 3 cut(s) 605, 1190, 1456
Bme18I GGWCC 1 cut(s) 903
BmgT120I GGNCC 2 cut(s) 903, 1192
BmiI GGNNCC 2 cut(s) 32, 929
BmrFI CCNGG 3 cut(s) 605, 1190, 1456
BmrI ACTGGG 2 cut(s) 76, 1400
BmsI GCATC 4 cut(s) 974, 1142, 1164, 1194
BmtI GCTAGC 1 cut(s) 885
BmuI ACTGGG 2 cut(s) 76, 1400
BpiI GAAGAC 1 cut(s) 291
BpmI CTGGAG 2 cut(s) 587, 1132
BsaJI CCNNGG 4 cut(s) 195, 604, 645, 1189
BsaWI WCCGGW 1 cut(s) 1531
BsaXI ACNNNNNCTCC 2 cut(s) 857, 887
Bsc4I CCNNNNNNNGG 3 cut(s) 469, 686, 1207
Bse1I ACTGG 4 cut(s) 71, 103, 393, 1406
Bse3DI GCAATG 1 cut(s) 293
BseAI TCCGGA 1 cut(s) 1531
BseBI CCWGG 3 cut(s) 605, 1190, 1456
BseDI CCNNGG 4 cut(s) 195, 604, 645, 1189
BseGI GGATG 5 cut(s) 502, 721, 905, 1185, 1401
BseLI CCNNNNNNNGG 3 cut(s) 469, 686, 1207
BseMI GCAATG 1 cut(s) 293
BseMII CTCAG 2 cut(s) 1129, 1397
BseNI ACTGG 4 cut(s) 71, 103, 393, 1406
BseSI GKGCMC 2 cut(s) 659, 752
BseYI CCCAGC 1 cut(s) 447
BshFI GGCC 3 cut(s) 210, 219, 1194
BsiHKAI GWGCWC 2 cut(s) 659, 1528
BsiSI CCGG 1 cut(s) 1532
BslFI GGGAC 2 cut(s) 702, 703
BslI CCNNNNNNNGG 3 cut(s) 469, 686, 1207
BsmAI GTCTC 1 cut(s) 1080
BsmFI GGGAC 2 cut(s) 702, 703
BsnI GGCC 3 cut(s) 210, 219, 1194
Bsp1286I GDGCHC 4 cut(s) 360, 659, 752, 1528
Bsp13I TCCGGA 1 cut(s) 1531
Bsp143I GATC 5 cut(s) 184, 335, 927, 1066, 1493
BspACI CCGC 1 cut(s) 399
BspANI GGCC 3 cut(s) 210, 219, 1194
BspCNI CTCAG 2 cut(s) 1128, 1396
BspEI TCCGGA 1 cut(s) 1531
BspLI GGNNCC 2 cut(s) 32, 929
BspOI GCTAGC 1 cut(s) 885
BspPI GGATC 3 cut(s) 192, 922, 935
BspQI GCTCTTC 1 cut(s) 1533
BsrDI GCAATG 1 cut(s) 293
BsrI ACTGG 4 cut(s) 71, 103, 393, 1406
BssECI CCNNGG 4 cut(s) 195, 604, 645, 1189
BssMI GATC 5 cut(s) 184, 335, 927, 1066, 1493
BssSI CACGAG 1 cut(s) 263
BssT1I CCWWGG 1 cut(s) 195
Bst2BI CACGAG 1 cut(s) 263
Bst2UI CCWGG 3 cut(s) 605, 1190, 1456
Bst4CI ACNGT 3 cut(s) 654, 739, 1074
Bst6I CTCTTC 2 cut(s) 1137, 1533
BstC8I GCNNGC 3 cut(s) 883, 1112, 1478
BstDEI CTNAG 2 cut(s) 1115, 1383
BstDSI CCRYGG 1 cut(s) 645
BstF5I GGATG 5 cut(s) 502, 721, 905, 1185, 1401
BstKTI GATC 5 cut(s) 187, 338, 930, 1069, 1496
BstMAI GTCTC 1 cut(s) 1080
BstMBI GATC 5 cut(s) 184, 335, 927, 1066, 1493
BstMWI GCNNNNNNNGC 6 cut(s) 216, 663, 672, 984, 1191, 1486
BstNI CCWGG 3 cut(s) 605, 1190, 1456
BstNSI RCATGY 1 cut(s) 824
BstSCI CCNGG 3 cut(s) 603, 1188, 1454
BstSLI GKGCMC 2 cut(s) 659, 752
BstV2I GAAGAC 1 cut(s) 291
BstX2I RGATCY 2 cut(s) 335, 927
BstYI RGATCY 2 cut(s) 335, 927
BsuI GTATCC 1 cut(s) 1017
BsuRI GGCC 3 cut(s) 210, 219, 1194
BtgI CCRYGG 1 cut(s) 645
BtsCI GGATG 5 cut(s) 502, 721, 905, 1185, 1401
BtsI GCAGTG 1 cut(s) 1309
BtsIMutI CAGTG 4 cut(s) 96, 400, 659, 1309
Cac8I GCNNGC 3 cut(s) 883, 1112, 1478
CaiI CAGNNNCTG 1 cut(s) 1078
Cfr13I GGNCC 2 cut(s) 903, 1192
Csp6I GTAC 5 cut(s) 102, 730, 740, 960, 1216
CviAII CATG 3 cut(s) 727, 768, 821
CviQI GTAC 5 cut(s) 102, 730, 740, 960, 1216
DdeI CTNAG 2 cut(s) 1115, 1383
DpnI GATC 5 cut(s) 186, 337, 929, 1068, 1495
DpnII GATC 5 cut(s) 184, 335, 927, 1066, 1493
Eam1104I CTCTTC 2 cut(s) 1137, 1533
EarI CTCTTC 2 cut(s) 1137, 1533
Eco130I CCWWGG 1 cut(s) 195
Eco147I AGGCCT 1 cut(s) 219
Eco24I GRGCYC 1 cut(s) 360
Eco47I GGWCC 1 cut(s) 903
Eco57I CTGAAG 1 cut(s) 1086
EcoRII CCWGG 3 cut(s) 603, 1188, 1454
EcoT14I CCWWGG 1 cut(s) 195
EcoT22I ATGCAT 2 cut(s) 989, 1157
EcoT38I GRGCYC 1 cut(s) 360
ErhI CCWWGG 1 cut(s) 195
FaeI CATG 3 cut(s) 730, 771, 824
FaqI GGGAC 2 cut(s) 702, 703
FatI CATG 3 cut(s) 726, 767, 820
FblI GTMKAC 1 cut(s) 1335
FokI GGATG 5 cut(s) 509, 708, 912, 1172, 1388
FriOI GRGCYC 1 cut(s) 360
FspBI CTAG 5 cut(s) 159, 405, 434, 477, 882
GsaI CCCAGC 1 cut(s) 451
GsuI CTGGAG 2 cut(s) 587, 1132
HaeIII GGCC 3 cut(s) 210, 219, 1194
HapII CCGG 1 cut(s) 1532
Hin1II CATG 3 cut(s) 730, 771, 824
HindIII AAGCTT 3 cut(s) 414, 1031, 1367
HinfI GANTC 2 cut(s) 39, 1094
HpaII CCGG 1 cut(s) 1532
HphI GGTGA 5 cut(s) 376, 382, 839, 1089, 1390
Hpy166II GTNNAC 4 cut(s) 384, 657, 773, 1336
Hpy188I TCNGA 6 cut(s) 974, 1080, 1093, 1105, 1330, 1391
Hpy188III TCNNGA 9 cut(s) 88, 143, 263, 1149, 1241, 1450, 1497, 1532, 1543
Hpy8I GTNNAC 4 cut(s) 384, 657, 773, 1336
Hpy99I CGWCG 2 cut(s) 277, 542
HpyAV CCTTC 7 cut(s) 209, 487, 519, 523, 886, 1110, 1453
HpyCH4III ACNGT 3 cut(s) 654, 739, 1074
HpyCH4IV ACGT 4 cut(s) 320, 684, 1166, 1236
HpyCH4V TGCA 4 cut(s) 657, 987, 1155, 1309
HpyF10VI GCNNNNNNNGC 6 cut(s) 216, 663, 672, 984, 1191, 1486
HpyF3I CTNAG 2 cut(s) 1115, 1383
HpySE526I ACGT 4 cut(s) 320, 684, 1166, 1236
Hsp92II CATG 3 cut(s) 730, 771, 824
Kpn2I TCCGGA 1 cut(s) 1531
Kzo9I GATC 5 cut(s) 184, 335, 927, 1066, 1493
LguI GCTCTTC 1 cut(s) 1533
LmnI GCTCC 2 cut(s) 36, 878
LweI GCATC 4 cut(s) 974, 1142, 1164, 1194
MaeI CTAG 5 cut(s) 159, 405, 434, 477, 882
MaeII ACGT 4 cut(s) 320, 684, 1166, 1236
MaeIII GTNAC 2 cut(s) 597, 1196
MalI GATC 5 cut(s) 186, 337, 929, 1068, 1495
MboI GATC 5 cut(s) 184, 335, 927, 1066, 1493
MflI RGATCY 2 cut(s) 335, 927
MhlI GDGCHC 4 cut(s) 360, 659, 752, 1528
MluCI AATT 8 cut(s) 7, 115, 178, 567, 625, 1042, 1350, 1553
MlyI GAGTC 1 cut(s) 33
MmeI TCCRAC 1 cut(s) 1347
Mph1103I ATGCAT 2 cut(s) 989, 1157
MroI TCCGGA 1 cut(s) 1531
MseI TTAA 6 cut(s) 332, 570, 798, 1050, 1212, 1502
MspI CCGG 1 cut(s) 1532
MspR9I CCNGG 3 cut(s) 605, 1190, 1456
MvaI CCWGG 3 cut(s) 605, 1190, 1456
MwoI GCNNNNNNNGC 6 cut(s) 216, 663, 672, 984, 1191, 1486
NdeII GATC 5 cut(s) 184, 335, 927, 1066, 1493
NheI GCTAGC 1 cut(s) 881
NlaIII CATG 3 cut(s) 730, 771, 824
NlaIV GGNNCC 2 cut(s) 32, 929
NmuCI GTSAC 1 cut(s) 597
NsiI ATGCAT 2 cut(s) 989, 1157
NspI RCATGY 1 cut(s) 824
PceI AGGCCT 1 cut(s) 219
PciSI GCTCTTC 1 cut(s) 1533
PfeI GAWTC 1 cut(s) 1094
PleI GAGTC 1 cut(s) 33
PpsI GAGTC 1 cut(s) 33
PshBI ATTAAT 1 cut(s) 570
Psp1406I AACGTT 2 cut(s) 320, 1166
Psp6I CCWGG 3 cut(s) 603, 1188, 1454
PspFI CCCAGC 1 cut(s) 447
PspGI CCWGG 3 cut(s) 603, 1188, 1454
PspN4I GGNNCC 2 cut(s) 32, 929
PspPI GGNCC 2 cut(s) 903, 1192
PstNI CAGNNNCTG 1 cut(s) 1078
PsuI RGATCY 2 cut(s) 335, 927
RsaI GTAC 5 cut(s) 103, 731, 741, 961, 1217
RsaNI GTAC 5 cut(s) 102, 730, 740, 960, 1216
SapI GCTCTTC 1 cut(s) 1533
SaqAI TTAA 6 cut(s) 332, 570, 798, 1050, 1212, 1502
Sau3AI GATC 5 cut(s) 184, 335, 927, 1066, 1493
Sau96I GGNCC 2 cut(s) 903, 1192
SchI GAGTC 1 cut(s) 33
ScrFI CCNGG 3 cut(s) 605, 1190, 1456
SduI GDGCHC 4 cut(s) 360, 659, 752, 1528
SfaNI GCATC 4 cut(s) 974, 1142, 1164, 1194
SfiI GGCCNNNNNGGCC 1 cut(s) 216
SinI GGWCC 1 cut(s) 903
Sse9I AATT 8 cut(s) 7, 115, 178, 567, 625, 1042, 1350, 1553
SseBI AGGCCT 1 cut(s) 219
SsiI CCGC 1 cut(s) 399
SspMI CTAG 5 cut(s) 159, 405, 434, 477, 882
StuI AGGCCT 1 cut(s) 219
StyD4I CCNGG 3 cut(s) 603, 1188, 1454
StyI CCWWGG 1 cut(s) 195
TaaI ACNGT 3 cut(s) 654, 739, 1074
TaiI ACGT 4 cut(s) 323, 687, 1169, 1239
TaqI TCGA 5 cut(s) 37, 272, 352, 814, 944
TasI AATT 8 cut(s) 7, 115, 178, 567, 625, 1042, 1350, 1553
TatI WGTACW 1 cut(s) 1215
TfiI GAWTC 1 cut(s) 1094
Tru1I TTAA 6 cut(s) 332, 570, 798, 1050, 1212, 1502
Tru9I TTAA 6 cut(s) 332, 570, 798, 1050, 1212, 1502
TscAI CASTG 4 cut(s) 103, 400, 659, 1316
TseFI GTSAC 1 cut(s) 597
Tsp45I GTSAC 1 cut(s) 597
TspDTI ATGAA 5 cut(s) 14, 126, 426, 588, 1111
TspGWI ACGGA 3 cut(s) 290, 634, 706
TspRI CASTG 4 cut(s) 103, 400, 659, 1316
VneI GTGCAC 1 cut(s) 655
VpaK11BI GGWCC 1 cut(s) 903
VspI ATTAAT 1 cut(s) 570
XapI RAATTY 5 cut(s) 7, 178, 625, 1042, 1553
XceI RCATGY 1 cut(s) 824
XcmI CCANNNNNNNNNTGG 1 cut(s) 95
XmiI GTMKAC 1 cut(s) 1335
XspI CTAG 5 cut(s) 159, 405, 434, 477, 882
Zsp2I ATGCAT 2 cut(s) 989, 1157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.