pycom12g21370

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
22545175 .. 22545607
433 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g21370.2

Sequence Viewer

Length: 348 bp
ATGCCACTTAATGCATCGTATCGTTTGGTATGCAGACGGGACGGGACGGGACAAGACGGAACGGAACAGAGCGGGAGCAAATATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGTTATAATTTTGTGTTCCACGGATGTGGAACGAGTCGTTCCAGGGGGGTGAGGCGGAACGAAAATTCACCCAAAACTCGTTCTGTGGAACAGCTCGTTTCACCCGTTTTAGACGCACCAAACGTGGGACGGAACGTCTTGTCTCACTCTGTTCCGTCCCGTCCCATGTACCAAACGGTACCTAAATGTTTTCACAACTTTGGTTGCCTGGTTAAATGGTAA

Protein Analysis

116

Amino Acids

13.01

Weight (kDa)

11.08

Isoelectric Point (pI)

91.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 132
Acc65I GGTACC 1 cut(s) 304
AccB1I GGYRCC 1 cut(s) 304
AccBSI CCGCTC 1 cut(s) 72
AciI CCGC 2 cut(s) 72, 181
AcsI RAATTY 1 cut(s) 190
AfaI GTAC 2 cut(s) 296, 306
AfiI CCNNNNNNNGG 2 cut(s) 93, 251
AhdI GACNNNNNGTC 1 cut(s) 260
AjnI CCWGG 2 cut(s) 167, 333
AleI CACNNNNGTG 1 cut(s) 150
AluBI AGCT 1 cut(s) 220
AluI AGCT 1 cut(s) 220
Alw26I GTCTC 2 cut(s) 112, 273
ApoI RAATTY 1 cut(s) 190
Asp718I GGTACC 1 cut(s) 304
AsuHPI GGTGA 3 cut(s) 186, 187, 219
BanI GGYRCC 1 cut(s) 304
BccI CCATC 1 cut(s) 87
BciT130I CCWGG 2 cut(s) 169, 335
BcoDI GTCTC 2 cut(s) 112, 273
Bme1390I CCNGG 2 cut(s) 169, 335
BmeRI GACNNNNNGTC 1 cut(s) 260
BmiI GGNNCC 1 cut(s) 306
BmrFI CCNGG 2 cut(s) 169, 335
BmsI GCATC 1 cut(s) 23
BsaJI CCNNGG 3 cut(s) 88, 145, 168
Bsc4I CCNNNNNNNGG 2 cut(s) 93, 251
BseBI CCWGG 2 cut(s) 169, 335
BseDI CCNNGG 3 cut(s) 88, 145, 168
BseGI GGATG 2 cut(s) 98, 155
BseLI CCNNNNNNNGG 2 cut(s) 93, 251
BshNI GGYRCC 1 cut(s) 304
BslFI GGGAC 6 cut(s) 53, 58, 63, 267, 268, 273
BslI CCNNNNNNNGG 2 cut(s) 93, 251
BsmAI GTCTC 2 cut(s) 112, 273
BsmBI CGTCTC 1 cut(s) 112
BsmFI GGGAC 6 cut(s) 53, 58, 63, 267, 268, 273
BspACI CCGC 2 cut(s) 72, 181
BspLI GGNNCC 1 cut(s) 306
BspT107I GGYRCC 1 cut(s) 304
BsrBI CCGCTC 1 cut(s) 72
BssECI CCNNGG 3 cut(s) 88, 145, 168
Bst2UI CCWGG 2 cut(s) 169, 335
Bst4CI ACNGT 1 cut(s) 304
BstDSI CCRYGG 1 cut(s) 145
BstF5I GGATG 2 cut(s) 98, 155
BstMAI GTCTC 2 cut(s) 112, 273
BstNI CCWGG 2 cut(s) 169, 335
BstSCI CCNGG 2 cut(s) 167, 333
BstXI CCANNNNNNTGG 1 cut(s) 152
BtgI CCRYGG 1 cut(s) 145
BtsCI GGATG 2 cut(s) 98, 155
CseI GACGC 1 cut(s) 248
Csp6I GTAC 2 cut(s) 295, 305
CviAII CATG 1 cut(s) 292
CviJI RGCY 1 cut(s) 220
CviKI_1 RGCY 1 cut(s) 220
CviQI GTAC 2 cut(s) 295, 305
DriI GACNNNNNGTC 1 cut(s) 260
Eam1105I GACNNNNNGTC 1 cut(s) 260
EciI GGCGGA 1 cut(s) 196
EcoRII CCWGG 2 cut(s) 167, 333
EcoT22I ATGCAT 1 cut(s) 16
Esp3I CGTCTC 1 cut(s) 112
FaeI CATG 1 cut(s) 295
FaiI YATR 4 cut(s) 31, 84, 132, 293
FaqI GGGAC 6 cut(s) 53, 58, 63, 267, 268, 273
FatI CATG 1 cut(s) 291
FauI CCCGC 1 cut(s) 65
FokI GGATG 2 cut(s) 105, 162
HgaI GACGC 1 cut(s) 248
Hin1II CATG 1 cut(s) 295
HinfI GANTC 1 cut(s) 160
HphI GGTGA 3 cut(s) 186, 187, 219
Hpy188I TCNGA 1 cut(s) 92
HpyAV CCTTC 1 cut(s) 108
HpyCH4III ACNGT 1 cut(s) 304
HpyCH4IV ACGT 2 cut(s) 249, 261
HpyCH4V TGCA 2 cut(s) 14, 33
HpySE526I ACGT 2 cut(s) 249, 261
Hsp92II CATG 1 cut(s) 295
KpnI GGTACC 1 cut(s) 308
LmnI GCTCC 1 cut(s) 75
LpnPI CCDG 3 cut(s) 154, 181, 320
LweI GCATC 1 cut(s) 23
MaeII ACGT 2 cut(s) 249, 261
MbiI CCGCTC 1 cut(s) 72
MboII GAAGA 2 cut(s) 120, 123
MluCI AATT 2 cut(s) 133, 190
MlyI GAGTC 1 cut(s) 169
MnlI CCTC 4 cut(s) 98, 98, 119, 171
Mph1103I ATGCAT 1 cut(s) 16
MseI TTAA 2 cut(s) 9, 339
MslI CAYNNNNRTG 1 cut(s) 150
MspR9I CCNGG 2 cut(s) 169, 335
MvaI CCWGG 2 cut(s) 169, 335
NlaIII CATG 1 cut(s) 295
NlaIV GGNNCC 1 cut(s) 306
NsiI ATGCAT 1 cut(s) 16
OliI CACNNNNGTG 1 cut(s) 150
PcsI WCGNNNNNNNCGW 2 cut(s) 228, 246
PleI GAGTC 1 cut(s) 168
PpsI GAGTC 1 cut(s) 168
PsiI TTATAA 1 cut(s) 132
Psp6I CCWGG 2 cut(s) 167, 333
PspGI CCWGG 2 cut(s) 167, 333
PspN4I GGNNCC 1 cut(s) 306
RsaI GTAC 2 cut(s) 296, 306
RsaNI GTAC 2 cut(s) 295, 305
RseI CAYNNNNRTG 1 cut(s) 150
SaqAI TTAA 2 cut(s) 9, 339
SchI GAGTC 1 cut(s) 169
ScrFI CCNGG 2 cut(s) 169, 335
SetI ASST 5 cut(s) 130, 222, 252, 264, 310
SfaNI GCATC 1 cut(s) 23
SmiMI CAYNNNNRTG 1 cut(s) 150
Sse9I AATT 2 cut(s) 133, 190
SsiI CCGC 2 cut(s) 72, 181
StyD4I CCNGG 2 cut(s) 167, 333
TaaI ACNGT 1 cut(s) 304
TaiI ACGT 2 cut(s) 252, 264
TasI AATT 2 cut(s) 133, 190
Tru1I TTAA 2 cut(s) 9, 339
Tru9I TTAA 2 cut(s) 9, 339
TspGWI ACGGA 6 cut(s) 72, 77, 136, 162, 270, 271
XapI RAATTY 1 cut(s) 190
Zsp2I ATGCAT 1 cut(s) 16
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.