pycom15g26870

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
22100106 .. 22100357
252 bp
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UTR
Exon/CDS
Intron
pycom15g26870.1

Sequence Viewer

Length: 252 bp
ATGGAACGGAGCGGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGCTATAATTTTGTGTTCCACGGATGTGGAACGAGTCGTTCCAGAGGGATGAGGTGGAACGAAAATTCACCCAAAACTCGTCCCGTGGCACAGCTCGTTCCACCCGTTTTAGGTGCACCAAATGTGGGACGGAACCCCTTGTCCCACTCTGTTCCGTCCTGTCTCACATACCAAACGGTACCTTAG

Protein Analysis

84

Amino Acids

9.26

Weight (kDa)

11.71

Isoelectric Point (pI)

97.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 244
AccB1I GGYRCC 1 cut(s) 244
AccBSI CCGCTC 1 cut(s) 12
AciI CCGC 1 cut(s) 12
AcsI RAATTY 1 cut(s) 130
AfaI GTAC 1 cut(s) 246
AfiI CCNNNNNNNGG 3 cut(s) 33, 176, 191
AleI CACNNNNGTG 1 cut(s) 90
AloI GAACNNNNNNTCC 2 cut(s) 191, 223
AluBI AGCT 1 cut(s) 160
AluI AGCT 1 cut(s) 160
Alw21I GWGCWC 1 cut(s) 184
Alw26I GTCTC 2 cut(s) 52, 233
Alw44I GTGCAC 1 cut(s) 180
ApaLI GTGCAC 1 cut(s) 180
ApoI RAATTY 1 cut(s) 130
Asp718I GGTACC 1 cut(s) 244
AsuHPI GGTGA 1 cut(s) 126
BaeGI GKGCMC 1 cut(s) 184
BanI GGYRCC 1 cut(s) 244
Bbv12I GWGCWC 1 cut(s) 184
BccI CCATC 1 cut(s) 27
BcoDI GTCTC 2 cut(s) 52, 233
BmiI GGNNCC 2 cut(s) 200, 246
BmsI GCATC 1 cut(s) 13
BsaJI CCNNGG 3 cut(s) 28, 85, 150
Bsc4I CCNNNNNNNGG 3 cut(s) 33, 176, 191
BseDI CCNNGG 3 cut(s) 28, 85, 150
BseGI GGATG 3 cut(s) 38, 95, 120
BseLI CCNNNNNNNGG 3 cut(s) 33, 176, 191
BseSI GKGCMC 1 cut(s) 184
BshNI GGYRCC 1 cut(s) 244
BsiHKAI GWGCWC 1 cut(s) 184
BslFI GGGAC 3 cut(s) 132, 193, 207
BslI CCNNNNNNNGG 3 cut(s) 33, 176, 191
BsmAI GTCTC 2 cut(s) 52, 233
BsmBI CGTCTC 1 cut(s) 52
BsmFI GGGAC 3 cut(s) 132, 193, 207
Bsp1286I GDGCHC 1 cut(s) 184
BspACI CCGC 1 cut(s) 12
BspLI GGNNCC 2 cut(s) 200, 246
BspT107I GGYRCC 1 cut(s) 244
BsrBI CCGCTC 1 cut(s) 12
BssECI CCNNGG 3 cut(s) 28, 85, 150
Bst4CI ACNGT 1 cut(s) 244
BstDEI CTNAG 1 cut(s) 249
BstDSI CCRYGG 2 cut(s) 85, 150
BstF5I GGATG 3 cut(s) 38, 95, 120
BstMAI GTCTC 2 cut(s) 52, 233
BstSLI GKGCMC 1 cut(s) 184
BstXI CCANNNNNNTGG 1 cut(s) 92
BtgI CCRYGG 2 cut(s) 85, 150
BtsCI GGATG 3 cut(s) 38, 95, 120
Csp6I GTAC 1 cut(s) 245
CviJI RGCY 2 cut(s) 69, 160
CviKI_1 RGCY 2 cut(s) 69, 160
CviQI GTAC 1 cut(s) 245
DdeI CTNAG 1 cut(s) 249
Esp3I CGTCTC 1 cut(s) 52
FaiI YATR 2 cut(s) 72, 235
FaqI GGGAC 3 cut(s) 132, 193, 207
FauI CCCGC 1 cut(s) 5
FokI GGATG 3 cut(s) 45, 102, 127
HinfI GANTC 1 cut(s) 100
HphI GGTGA 1 cut(s) 126
Hpy166II GTNNAC 1 cut(s) 182
Hpy188I TCNGA 1 cut(s) 32
Hpy188III TCNNGA 1 cut(s) 108
Hpy8I GTNNAC 1 cut(s) 182
HpyAV CCTTC 1 cut(s) 48
HpyCH4III ACNGT 1 cut(s) 244
HpyCH4V TGCA 1 cut(s) 182
HpyF3I CTNAG 1 cut(s) 249
KpnI GGTACC 1 cut(s) 248
LmnI GCTCC 2 cut(s) 9, 15
LpnPI CCDG 2 cut(s) 121, 238
LweI GCATC 1 cut(s) 13
MbiI CCGCTC 1 cut(s) 12
MboII GAAGA 2 cut(s) 60, 63
MhlI GDGCHC 1 cut(s) 184
MluCI AATT 2 cut(s) 73, 130
MlyI GAGTC 1 cut(s) 109
MnlI CCTC 5 cut(s) 38, 38, 59, 104, 111
MslI CAYNNNNRTG 1 cut(s) 90
NlaIV GGNNCC 2 cut(s) 200, 246
OliI CACNNNNGTG 1 cut(s) 90
PcsI WCGNNNNNNNCGW 1 cut(s) 168
PleI GAGTC 1 cut(s) 108
PpsI GAGTC 1 cut(s) 108
PspN4I GGNNCC 2 cut(s) 200, 246
RsaI GTAC 1 cut(s) 246
RsaNI GTAC 1 cut(s) 245
RseI CAYNNNNRTG 1 cut(s) 90
SchI GAGTC 1 cut(s) 109
SduI GDGCHC 1 cut(s) 184
SetI ASST 4 cut(s) 122, 162, 181, 250
SfaNI GCATC 1 cut(s) 13
SmiMI CAYNNNNRTG 1 cut(s) 90
Sse9I AATT 2 cut(s) 73, 130
SsiI CCGC 1 cut(s) 12
TaaI ACNGT 1 cut(s) 244
TasI AATT 2 cut(s) 73, 130
TspGWI ACGGA 5 cut(s) 22, 76, 102, 210, 211
VneI GTGCAC 1 cut(s) 180
XapI RAATTY 1 cut(s) 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.