pycom13g10600

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
7103647 .. 7104220
574 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g10600.2

Sequence Viewer

Length: 399 bp
ATGGCGACACTAATCAACAACTCAATAGCGCGTATGTATCGTTTGGTATGCAGACGGGACGGGACGGAACGGAATCGGACGGGACGGGACGGGACAGGACGGAACGGAACGGAACGGAGCGGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGATGTTATAATTTTGTGTTCCACGGATGTGGAACGAGTCGTTCCAGGGGGGTGAGGTGGAACGAAAATTCATCCAAAACTCGTCCTGTGGAACAGCTCGTTCCACCCGTTTTAGGCACACCAAACGTGGGACGGAACGCCTTGTCCCACTCTGTTCCGTCCCGTCCCACGTACCAAACGGTACCTCAATCTTGTAAAATTAGGGATTTTCAACCTAAAACACCTTGA

Protein Analysis

133

Amino Acids

14.93

Weight (kDa)

11.59

Isoelectric Point (pI)

77.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 180
Acc65I GGTACC 1 cut(s) 352
AccB1I GGYRCC 1 cut(s) 352
AccBSI CCGCTC 1 cut(s) 120
AccII CGCG 1 cut(s) 31
AciI CCGC 1 cut(s) 120
AcsI RAATTY 1 cut(s) 238
AfaI GTAC 2 cut(s) 344, 354
AfiI CCNNNNNNNGG 3 cut(s) 141, 284, 299
AgsI TTSAA 1 cut(s) 383
AjnI CCWGG 1 cut(s) 215
AleI CACNNNNGTG 1 cut(s) 198
AloI GAACNNNNNNTCC 2 cut(s) 299, 331
AluBI AGCT 1 cut(s) 268
AluI AGCT 1 cut(s) 268
Alw26I GTCTC 1 cut(s) 160
ApoI RAATTY 1 cut(s) 238
Asp718I GGTACC 1 cut(s) 352
AspLEI GCGC 1 cut(s) 31
AsuHPI GGTGA 1 cut(s) 235
BanI GGYRCC 1 cut(s) 352
BccI CCATC 1 cut(s) 135
BciT130I CCWGG 1 cut(s) 217
BcoDI GTCTC 1 cut(s) 160
Bme1390I CCNGG 1 cut(s) 217
BmiI GGNNCC 1 cut(s) 354
BmrFI CCNGG 1 cut(s) 217
BmsI GCATC 1 cut(s) 121
BsaAI YACGTR 1 cut(s) 342
BsaJI CCNNGG 3 cut(s) 136, 193, 216
Bsc4I CCNNNNNNNGG 3 cut(s) 141, 284, 299
BseBI CCWGG 1 cut(s) 217
BseDI CCNNGG 3 cut(s) 136, 193, 216
BseGI GGATG 3 cut(s) 146, 203, 242
BseLI CCNNNNNNNGG 3 cut(s) 141, 284, 299
Bsh1236I CGCG 1 cut(s) 31
BshNI GGYRCC 1 cut(s) 352
BslFI GGGAC 9 cut(s) 71, 76, 96, 101, 106, 301, 315, 316, 321
BslI CCNNNNNNNGG 3 cut(s) 141, 284, 299
BsmAI GTCTC 1 cut(s) 160
BsmBI CGTCTC 1 cut(s) 160
BsmFI GGGAC 9 cut(s) 71, 76, 96, 101, 106, 301, 315, 316, 321
BspACI CCGC 1 cut(s) 120
BspFNI CGCG 1 cut(s) 31
BspLI GGNNCC 1 cut(s) 354
BspT107I GGYRCC 1 cut(s) 352
BsrBI CCGCTC 1 cut(s) 120
BssECI CCNNGG 3 cut(s) 136, 193, 216
Bst2UI CCWGG 1 cut(s) 217
Bst4CI ACNGT 1 cut(s) 352
BstBAI YACGTR 1 cut(s) 342
BstDSI CCRYGG 1 cut(s) 193
BstF5I GGATG 3 cut(s) 146, 203, 242
BstFNI CGCG 1 cut(s) 31
BstHHI GCGC 1 cut(s) 31
BstMAI GTCTC 1 cut(s) 160
BstNI CCWGG 1 cut(s) 217
BstSCI CCNGG 1 cut(s) 215
BstUI CGCG 1 cut(s) 31
BstXI CCANNNNNNTGG 1 cut(s) 200
BtgI CCRYGG 1 cut(s) 193
BtsCI GGATG 3 cut(s) 146, 203, 242
CfoI GCGC 1 cut(s) 31
Csp6I GTAC 2 cut(s) 343, 353
CviJI RGCY 1 cut(s) 268
CviKI_1 RGCY 1 cut(s) 268
CviQI GTAC 2 cut(s) 343, 353
EcoRII CCWGG 1 cut(s) 215
Esp3I CGTCTC 1 cut(s) 160
FaiI YATR 3 cut(s) 35, 49, 180
FaqI GGGAC 9 cut(s) 71, 76, 96, 101, 106, 301, 315, 316, 321
FauI CCCGC 1 cut(s) 113
FokI GGATG 3 cut(s) 153, 210, 229
GlaI GCGC 1 cut(s) 30
HhaI GCGC 1 cut(s) 31
Hin6I GCGC 1 cut(s) 29
HinP1I GCGC 1 cut(s) 29
HinfI GANTC 2 cut(s) 73, 208
HphI GGTGA 1 cut(s) 235
Hpy188I TCNGA 2 cut(s) 78, 140
HpyAV CCTTC 1 cut(s) 156
HpyCH4III ACNGT 1 cut(s) 352
HpyCH4IV ACGT 2 cut(s) 297, 341
HpyCH4V TGCA 1 cut(s) 51
HpySE526I ACGT 2 cut(s) 297, 341
HspAI GCGC 1 cut(s) 29
KpnI GGTACC 1 cut(s) 356
LmnI GCTCC 2 cut(s) 117, 123
LpnPI CCDG 4 cut(s) 81, 202, 229, 270
LweI GCATC 1 cut(s) 121
MaeII ACGT 2 cut(s) 297, 341
MbiI CCGCTC 1 cut(s) 120
MboII GAAGA 2 cut(s) 168, 171
MluCI AATT 3 cut(s) 181, 238, 369
MlyI GAGTC 1 cut(s) 217
MnlI CCTC 4 cut(s) 146, 146, 219, 366
MslI CAYNNNNRTG 1 cut(s) 198
MspR9I CCNGG 1 cut(s) 217
MvaI CCWGG 1 cut(s) 217
MvnI CGCG 1 cut(s) 31
NlaIV GGNNCC 1 cut(s) 354
OliI CACNNNNGTG 1 cut(s) 198
PcsI WCGNNNNNNNCGW 1 cut(s) 276
PfeI GAWTC 1 cut(s) 73
PleI GAGTC 1 cut(s) 216
PpsI GAGTC 1 cut(s) 216
Ppu21I YACGTR 1 cut(s) 342
PsiI TTATAA 1 cut(s) 180
Psp6I CCWGG 1 cut(s) 215
PspGI CCWGG 1 cut(s) 215
PspN4I GGNNCC 1 cut(s) 354
RsaI GTAC 2 cut(s) 344, 354
RsaNI GTAC 2 cut(s) 343, 353
RseI CAYNNNNRTG 1 cut(s) 198
SchI GAGTC 1 cut(s) 217
ScrFI CCNGG 1 cut(s) 217
SetI ASST 7 cut(s) 230, 270, 300, 344, 358, 388, 397
SfaNI GCATC 1 cut(s) 121
SmiMI CAYNNNNRTG 1 cut(s) 198
Sse9I AATT 3 cut(s) 181, 238, 369
SsiI CCGC 1 cut(s) 120
StyD4I CCNGG 1 cut(s) 215
TaaI ACNGT 1 cut(s) 352
TaiI ACGT 2 cut(s) 300, 344
TasI AATT 3 cut(s) 181, 238, 369
TfiI GAWTC 1 cut(s) 73
TspDTI ATGAA 1 cut(s) 231
XapI RAATTY 1 cut(s) 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.