pycom13g03500

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
2316952 .. 2317323
372 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g03500.1

Sequence Viewer

Length: 372 bp
ATGCTTATAAGCAGGTTGCCTAGGTTTGGTTTCCAAAGTCCTGTTCTCTTAGGTATCGTTTGGTATGCAGACGGGACGAGACGGAACGCAATGGGACGGGACGGGACGGGACAGGACGGAACGGAACGGAGCGGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGTTATAATTTTGTGTTCCACGGATGTGGAACAAGTTGTTCCAGGAGGTTGAGGTGGAACGAAAATTCACCCAAAACTCGTCCCGTGGAACAGCTCGTTCCACCCGTTTTAAGAGCACCAAACGTGGGACGGAACGCCTTGTCCCACTCTGTTCCGTCCCGTCCCACGTACCAAACGGTACCTTAA

Protein Analysis

124

Amino Acids

13.82

Weight (kDa)

11.68

Isoelectric Point (pI)

94.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 8, 192
Acc36I ACCTGC 1 cut(s) 3
Acc65I GGTACC 1 cut(s) 364
AccB1I GGYRCC 1 cut(s) 364
AccBSI CCGCTC 1 cut(s) 132
AciI CCGC 1 cut(s) 132
AcsI RAATTY 1 cut(s) 250
AfaI GTAC 2 cut(s) 356, 366
AfiI CCNNNNNNNGG 3 cut(s) 26, 153, 311
AjnI CCWGG 1 cut(s) 227
AjuI GAANNNNNNNTTGG 2 cut(s) 27, 59
AleI CACNNNNGTG 1 cut(s) 210
AloI GAACNNNNNNTCC 2 cut(s) 311, 343
AluBI AGCT 1 cut(s) 280
AluI AGCT 1 cut(s) 280
Alw21I GWGCWC 1 cut(s) 304
Alw26I GTCTC 2 cut(s) 73, 172
ApoI RAATTY 1 cut(s) 250
Asp718I GGTACC 1 cut(s) 364
AspA2I CCTAGG 1 cut(s) 20
AsuHPI GGTGA 1 cut(s) 246
AvrII CCTAGG 1 cut(s) 20
BanI GGYRCC 1 cut(s) 364
Bbv12I GWGCWC 1 cut(s) 304
BccI CCATC 1 cut(s) 147
BciT130I CCWGG 1 cut(s) 229
BcoDI GTCTC 2 cut(s) 73, 172
BfaI CTAG 1 cut(s) 21
BfuAI ACCTGC 1 cut(s) 3
BlnI CCTAGG 1 cut(s) 20
Bme1390I CCNGG 1 cut(s) 229
BmiI GGNNCC 1 cut(s) 366
BmrFI CCNGG 1 cut(s) 229
BmsI GCATC 1 cut(s) 133
BsaAI YACGTR 1 cut(s) 354
BsaJI CCNNGG 4 cut(s) 20, 148, 205, 270
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 153, 311
Bse3DI GCAATG 1 cut(s) 96
BseBI CCWGG 1 cut(s) 229
BseDI CCNNGG 4 cut(s) 20, 148, 205, 270
BseGI GGATG 2 cut(s) 158, 215
BseLI CCNNNNNNNGG 3 cut(s) 26, 153, 311
BseMI GCAATG 1 cut(s) 96
BshNI GGYRCC 1 cut(s) 364
BsiHKAI GWGCWC 1 cut(s) 304
BslI CCNNNNNNNGG 3 cut(s) 26, 153, 311
BsmAI GTCTC 2 cut(s) 73, 172
BsmBI CGTCTC 2 cut(s) 73, 172
Bsp1286I GDGCHC 1 cut(s) 304
BspACI CCGC 1 cut(s) 132
BspLI GGNNCC 1 cut(s) 366
BspMI ACCTGC 1 cut(s) 3
BspT107I GGYRCC 1 cut(s) 364
BsrBI CCGCTC 1 cut(s) 132
BsrDI GCAATG 1 cut(s) 96
BssECI CCNNGG 4 cut(s) 20, 148, 205, 270
BssT1I CCWWGG 1 cut(s) 20
Bst2UI CCWGG 1 cut(s) 229
Bst4CI ACNGT 1 cut(s) 364
BstBAI YACGTR 1 cut(s) 354
BstDEI CTNAG 1 cut(s) 49
BstDSI CCRYGG 2 cut(s) 205, 270
BstF5I GGATG 2 cut(s) 158, 215
BstMAI GTCTC 2 cut(s) 73, 172
BstNI CCWGG 1 cut(s) 229
BstSCI CCNGG 1 cut(s) 227
BstXI CCANNNNNNTGG 1 cut(s) 212
BtgI CCRYGG 2 cut(s) 205, 270
BtsCI GGATG 2 cut(s) 158, 215
BveI ACCTGC 1 cut(s) 3
Csp6I GTAC 2 cut(s) 355, 365
CviJI RGCY 1 cut(s) 280
CviKI_1 RGCY 1 cut(s) 280
CviQI GTAC 2 cut(s) 355, 365
DdeI CTNAG 1 cut(s) 49
Eco130I CCWWGG 1 cut(s) 20
EcoRII CCWGG 1 cut(s) 227
EcoT14I CCWWGG 1 cut(s) 20
ErhI CCWWGG 1 cut(s) 20
Esp3I CGTCTC 2 cut(s) 73, 172
FaiI YATR 3 cut(s) 8, 66, 192
FauI CCCGC 1 cut(s) 125
FokI GGATG 2 cut(s) 165, 222
FspBI CTAG 1 cut(s) 21
HphI GGTGA 1 cut(s) 246
Hpy188I TCNGA 1 cut(s) 152
HpyAV CCTTC 1 cut(s) 168
HpyCH4III ACNGT 1 cut(s) 364
HpyCH4IV ACGT 2 cut(s) 309, 353
HpyCH4V TGCA 1 cut(s) 68
HpyF3I CTNAG 1 cut(s) 49
HpySE526I ACGT 2 cut(s) 309, 353
KpnI GGTACC 1 cut(s) 368
LmnI GCTCC 2 cut(s) 129, 135
LpnPI CCDG 4 cut(s) 54, 98, 214, 241
LweI GCATC 1 cut(s) 133
MaeI CTAG 1 cut(s) 21
MaeII ACGT 2 cut(s) 309, 353
MbiI CCGCTC 1 cut(s) 132
MboII GAAGA 2 cut(s) 180, 183
MhlI GDGCHC 1 cut(s) 304
MluCI AATT 2 cut(s) 193, 250
MnlI CCTC 5 cut(s) 158, 158, 179, 225, 231
MseI TTAA 2 cut(s) 296, 370
MslI CAYNNNNRTG 1 cut(s) 210
MspR9I CCNGG 1 cut(s) 229
MvaI CCWGG 1 cut(s) 229
NlaIV GGNNCC 1 cut(s) 366
OliI CACNNNNGTG 1 cut(s) 210
PcsI WCGNNNNNNNCGW 1 cut(s) 288
PfoI TCCNGGA 1 cut(s) 227
Ppu21I YACGTR 1 cut(s) 354
PsiI TTATAA 2 cut(s) 8, 192
Psp6I CCWGG 1 cut(s) 227
PspGI CCWGG 1 cut(s) 227
PspN4I GGNNCC 1 cut(s) 366
RsaI GTAC 2 cut(s) 356, 366
RsaNI GTAC 2 cut(s) 355, 365
RseI CAYNNNNRTG 1 cut(s) 210
SaqAI TTAA 2 cut(s) 296, 370
ScrFI CCNGG 1 cut(s) 229
SduI GDGCHC 1 cut(s) 304
SfaNI GCATC 1 cut(s) 133
SmiMI CAYNNNNRTG 1 cut(s) 210
Sse9I AATT 2 cut(s) 193, 250
SsiI CCGC 1 cut(s) 132
SspMI CTAG 1 cut(s) 21
StyD4I CCNGG 1 cut(s) 227
StyI CCWWGG 1 cut(s) 20
TaaI ACNGT 1 cut(s) 364
TaiI ACGT 2 cut(s) 312, 356
TasI AATT 2 cut(s) 193, 250
Tru1I TTAA 2 cut(s) 296, 370
Tru9I TTAA 2 cut(s) 296, 370
TspGWI ACGGA 8 cut(s) 97, 132, 137, 142, 196, 222, 330, 331
XapI RAATTY 1 cut(s) 250
XmaJI CCTAGG 1 cut(s) 20
XspI CTAG 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.