pycom10g28210

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
28886182 .. 28886571
390 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g28210.1

Sequence Viewer

Length: 390 bp
ATGTTGATTTCTCGCTCTAAGTTTTTGTTTGACTTTAAGAGAAGGAAGGAGCTAGGGTTCTCTGTTTACGCATTATATTTACGGCTTAGGGTTACCCGTGCCTTTAGGTATCGTTTGGTATGCAGACGGGACGGGACGGGACAGGACAGAACGGAACGGAGCGGGAGGAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGTTATAATTTTGTGTTCCACGGATGTGGAACGAGTCATTTCAGGGGGGTAAGGTGGAACGAAAATTCACCCAAAACTCGTCCCGTAGAACAACTCGTTCCACCCGTTTTAGGCGCACCAAACGTGGAACGGAACGCCTTGTCCCACTCTGTTCCGTCCCGTTCCACGTACTAA

Protein Analysis

130

Amino Acids

15.16

Weight (kDa)

11.64

Isoelectric Point (pI)

79.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 222
AccBSI CCGCTC 1 cut(s) 162
AciI CCGC 1 cut(s) 162
AcsI RAATTY 1 cut(s) 280
AfaI GTAC 1 cut(s) 386
AfiI CCNNNNNNNGG 2 cut(s) 183, 326
AleI CACNNNNGTG 1 cut(s) 240
AloI GAACNNNNNNTCC 4 cut(s) 41, 73, 341, 373
AluBI AGCT 1 cut(s) 52
AluI AGCT 1 cut(s) 52
Alw26I GTCTC 1 cut(s) 202
ApoI RAATTY 1 cut(s) 280
AspLEI GCGC 1 cut(s) 332
AsuHPI GGTGA 1 cut(s) 276
BccI CCATC 1 cut(s) 177
BceAI ACGGC 1 cut(s) 98
BcoDI GTCTC 1 cut(s) 202
BfaI CTAG 1 cut(s) 53
BmsI GCATC 1 cut(s) 163
Bpu10I CCTNAGC 1 cut(s) 86
BsaAI YACGTR 1 cut(s) 384
BsaJI CCNNGG 2 cut(s) 178, 235
BsaXI ACNNNNNCTCC 2 cut(s) 41, 71
Bsc4I CCNNNNNNNGG 2 cut(s) 183, 326
BseDI CCNNGG 2 cut(s) 178, 235
BseGI GGATG 2 cut(s) 188, 245
BseLI CCNNNNNNNGG 2 cut(s) 183, 326
BslFI GGGAC 6 cut(s) 143, 148, 153, 282, 343, 358
BslI CCNNNNNNNGG 2 cut(s) 183, 326
BsmAI GTCTC 1 cut(s) 202
BsmBI CGTCTC 1 cut(s) 202
BsmFI GGGAC 6 cut(s) 143, 148, 153, 282, 343, 358
BspACI CCGC 1 cut(s) 162
BsrBI CCGCTC 1 cut(s) 162
BssECI CCNNGG 2 cut(s) 178, 235
BstBAI YACGTR 1 cut(s) 384
BstDEI CTNAG 2 cut(s) 18, 86
BstDSI CCRYGG 1 cut(s) 235
BstEII GGTNACC 1 cut(s) 91
BstF5I GGATG 2 cut(s) 188, 245
BstHHI GCGC 1 cut(s) 332
BstMAI GTCTC 1 cut(s) 202
BstPI GGTNACC 1 cut(s) 91
BstXI CCANNNNNNTGG 1 cut(s) 242
BtgI CCRYGG 1 cut(s) 235
BtsCI GGATG 2 cut(s) 188, 245
CfoI GCGC 1 cut(s) 332
Csp6I GTAC 1 cut(s) 385
CviJI RGCY 2 cut(s) 52, 85
CviKI_1 RGCY 2 cut(s) 52, 85
CviQI GTAC 1 cut(s) 385
DdeI CTNAG 2 cut(s) 18, 86
Eco91I GGTNACC 1 cut(s) 91
EcoO65I GGTNACC 1 cut(s) 91
Esp3I CGTCTC 1 cut(s) 202
FaiI YATR 3 cut(s) 76, 121, 222
FaqI GGGAC 6 cut(s) 143, 148, 153, 282, 343, 358
FauI CCCGC 1 cut(s) 155
FokI GGATG 2 cut(s) 195, 252
FspBI CTAG 1 cut(s) 53
GlaI GCGC 1 cut(s) 331
HhaI GCGC 1 cut(s) 332
Hin6I GCGC 1 cut(s) 330
HinP1I GCGC 1 cut(s) 330
HinfI GANTC 1 cut(s) 250
HphI GGTGA 1 cut(s) 276
Hpy166II GTNNAC 1 cut(s) 67
Hpy188I TCNGA 1 cut(s) 182
Hpy8I GTNNAC 1 cut(s) 67
HpyAV CCTTC 3 cut(s) 36, 40, 198
HpyCH4IV ACGT 2 cut(s) 339, 383
HpyCH4V TGCA 1 cut(s) 123
HpyF3I CTNAG 2 cut(s) 18, 86
HpySE526I ACGT 2 cut(s) 339, 383
HspAI GCGC 1 cut(s) 330
LmnI GCTCC 2 cut(s) 49, 159
LpnPI CCDG 2 cut(s) 128, 244
LweI GCATC 1 cut(s) 163
MaeI CTAG 1 cut(s) 53
MaeII ACGT 2 cut(s) 339, 383
MaeIII GTNAC 1 cut(s) 91
MbiI CCGCTC 1 cut(s) 162
MboII GAAGA 2 cut(s) 210, 213
MluCI AATT 2 cut(s) 223, 280
MlyI GAGTC 1 cut(s) 259
MnlI CCTC 4 cut(s) 159, 188, 188, 209
MseI TTAA 1 cut(s) 36
MslI CAYNNNNRTG 1 cut(s) 240
OliI CACNNNNGTG 1 cut(s) 240
PcsI WCGNNNNNNNCGW 1 cut(s) 318
PleI GAGTC 1 cut(s) 258
PpsI GAGTC 1 cut(s) 258
Ppu21I YACGTR 1 cut(s) 384
PsiI TTATAA 1 cut(s) 222
PspEI GGTNACC 1 cut(s) 91
RsaI GTAC 1 cut(s) 386
RsaNI GTAC 1 cut(s) 385
RseI CAYNNNNRTG 1 cut(s) 240
SaqAI TTAA 1 cut(s) 36
SchI GAGTC 1 cut(s) 259
SetI ASST 6 cut(s) 54, 110, 220, 272, 342, 386
SfaNI GCATC 1 cut(s) 163
SmiMI CAYNNNNRTG 1 cut(s) 240
Sse9I AATT 2 cut(s) 223, 280
SsiI CCGC 1 cut(s) 162
SspMI CTAG 1 cut(s) 53
TaiI ACGT 2 cut(s) 342, 386
TasI AATT 2 cut(s) 223, 280
Tru1I TTAA 1 cut(s) 36
Tru9I TTAA 1 cut(s) 36
TspGWI ACGGA 6 cut(s) 167, 172, 226, 252, 360, 361
XapI RAATTY 1 cut(s) 280
XspI CTAG 1 cut(s) 53
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.