pycom03g00220

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
216808 .. 217278
471 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g00220.2

Sequence Viewer

Length: 414 bp
ATGTGGATGTCTTTGGTGGCAACGCCGTCGTCGAATATTAGATTGGGGGCAGCGATTGTTTCTTCGAGTCGGGAGTGCTTCAAGAGGAACTTGGGTATCGTTTGGTATGCAGACGAGACGGGACGGAACGGAATGGGACGGGACGGGACGGGACAGGACGGAATGGAACGGAGCGGGAGCAAAGATGCCTTCAGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGTTATAATTTTGTGTTCCACGGATGTGGAACGAGTCGTTCCAGGGGGGTGAGGTGGAACGAAAATTCACCCAAAACTCGTCCCGTGGAAAAACTTGTTCCACCCGTTTTAGGCGCACCAAACGTGGGACGGAACGCCTTGTCCCATTCTGTTCCGTCCCGTCCCACGTACCAAACGGTACCTTGA

Protein Analysis

138

Amino Acids

15.24

Weight (kDa)

11.46

Isoelectric Point (pI)

83.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 234
Acc65I GGTACC 1 cut(s) 406
AccB1I GGYRCC 1 cut(s) 406
AccBSI CCGCTC 1 cut(s) 174
AciI CCGC 1 cut(s) 174
AcsI RAATTY 1 cut(s) 292
AcuI CTGAAG 1 cut(s) 175
AfaI GTAC 2 cut(s) 398, 408
AfiI CCNNNNNNNGG 3 cut(s) 195, 338, 353
AgsI TTSAA 1 cut(s) 82
AjnI CCWGG 1 cut(s) 269
AjuI GAANNNNNNNTTGG 2 cut(s) 26, 58
AleI CACNNNNGTG 1 cut(s) 252
AloI GAACNNNNNNTCC 2 cut(s) 353, 385
Alw26I GTCTC 2 cut(s) 110, 214
ApeKI GCWGC 1 cut(s) 50
ApoI RAATTY 1 cut(s) 292
Asp718I GGTACC 1 cut(s) 406
AspLEI GCGC 1 cut(s) 344
AsuHPI GGTGA 2 cut(s) 288, 289
BaeI ACNNNNGTAYC 2 cut(s) 79, 112
BanI GGYRCC 1 cut(s) 406
BbvI GCAGC 1 cut(s) 62
BccI CCATC 1 cut(s) 189
BceAI ACGGC 1 cut(s) 10
BcgI CGANNNNNNTGC 2 cut(s) 9, 43
BciT130I CCWGG 1 cut(s) 271
BcoDI GTCTC 2 cut(s) 110, 214
BisI GCNGC 1 cut(s) 51
BlsI GCNGC 1 cut(s) 52
Bme1390I CCNGG 1 cut(s) 271
BmiI GGNNCC 1 cut(s) 408
BmrFI CCNGG 1 cut(s) 271
BmsI GCATC 1 cut(s) 175
BsaAI YACGTR 1 cut(s) 396
BsaJI CCNNGG 3 cut(s) 247, 270, 312
Bsc4I CCNNNNNNNGG 3 cut(s) 195, 338, 353
BseBI CCWGG 1 cut(s) 271
BseDI CCNNGG 3 cut(s) 247, 270, 312
BseGI GGATG 2 cut(s) 12, 257
BseLI CCNNNNNNNGG 3 cut(s) 195, 338, 353
BseXI GCAGC 1 cut(s) 62
BshNI GGYRCC 1 cut(s) 406
BslI CCNNNNNNNGG 3 cut(s) 195, 338, 353
BsmAI GTCTC 2 cut(s) 110, 214
BsmBI CGTCTC 2 cut(s) 110, 214
BspACI CCGC 1 cut(s) 174
BspLI GGNNCC 1 cut(s) 408
BspT107I GGYRCC 1 cut(s) 406
BsrBI CCGCTC 1 cut(s) 174
BssECI CCNNGG 3 cut(s) 247, 270, 312
Bst2UI CCWGG 1 cut(s) 271
Bst4CI ACNGT 1 cut(s) 406
BstBAI YACGTR 1 cut(s) 396
BstDSI CCRYGG 2 cut(s) 247, 312
BstF5I GGATG 2 cut(s) 12, 257
BstHHI GCGC 1 cut(s) 344
BstMAI GTCTC 2 cut(s) 110, 214
BstNI CCWGG 1 cut(s) 271
BstSCI CCNGG 1 cut(s) 269
BstV1I GCAGC 1 cut(s) 62
BstXI CCANNNNNNTGG 1 cut(s) 254
BtgI CCRYGG 2 cut(s) 247, 312
BtsCI GGATG 2 cut(s) 12, 257
CfoI GCGC 1 cut(s) 344
Csp6I GTAC 2 cut(s) 397, 407
CviQI GTAC 2 cut(s) 397, 407
Eco57I CTGAAG 1 cut(s) 175
EcoRII CCWGG 1 cut(s) 269
Esp3I CGTCTC 2 cut(s) 110, 214
FaiI YATR 2 cut(s) 108, 234
FalI AAGNNNNNCTT 2 cut(s) 74, 106
FauI CCCGC 1 cut(s) 167
Fnu4HI GCNGC 1 cut(s) 51
FokI GGATG 2 cut(s) 19, 264
Fsp4HI GCNGC 1 cut(s) 51
GlaI GCGC 1 cut(s) 343
GluI GCNGC 1 cut(s) 51
HhaI GCGC 1 cut(s) 344
Hin6I GCGC 1 cut(s) 342
HinP1I GCGC 1 cut(s) 342
HinfI GANTC 2 cut(s) 67, 262
HphI GGTGA 2 cut(s) 288, 289
Hpy188I TCNGA 1 cut(s) 194
Hpy188III TCNNGA 2 cut(s) 71, 82
Hpy99I CGWCG 2 cut(s) 31, 34
HpyAV CCTTC 2 cut(s) 199, 210
HpyCH4III ACNGT 1 cut(s) 406
HpyCH4IV ACGT 2 cut(s) 351, 395
HpyCH4V TGCA 1 cut(s) 110
HpySE526I ACGT 2 cut(s) 351, 395
HspAI GCGC 1 cut(s) 342
KpnI GGTACC 1 cut(s) 410
LmnI GCTCC 2 cut(s) 171, 177
LpnPI CCDG 3 cut(s) 140, 256, 283
Lsp1109I GCAGC 1 cut(s) 62
LweI GCATC 1 cut(s) 175
MaeII ACGT 2 cut(s) 351, 395
MbiI CCGCTC 1 cut(s) 174
MboII GAAGA 3 cut(s) 54, 222, 225
MluCI AATT 2 cut(s) 235, 292
MlyI GAGTC 2 cut(s) 76, 271
MnlI CCTC 4 cut(s) 78, 200, 221, 273
MslI CAYNNNNRTG 1 cut(s) 252
MspR9I CCNGG 1 cut(s) 271
MvaI CCWGG 1 cut(s) 271
NlaIV GGNNCC 1 cut(s) 408
OliI CACNNNNGTG 1 cut(s) 252
PcsI WCGNNNNNNNCGW 1 cut(s) 29
PkrI GCNGC 1 cut(s) 52
PleI GAGTC 2 cut(s) 75, 270
PpsI GAGTC 2 cut(s) 75, 270
Ppu21I YACGTR 1 cut(s) 396
PsiI TTATAA 1 cut(s) 234
Psp6I CCWGG 1 cut(s) 269
PspGI CCWGG 1 cut(s) 269
PspN4I GGNNCC 1 cut(s) 408
RsaI GTAC 2 cut(s) 398, 408
RsaNI GTAC 2 cut(s) 397, 407
RseI CAYNNNNRTG 1 cut(s) 252
SatI GCNGC 1 cut(s) 51
SchI GAGTC 2 cut(s) 76, 271
ScrFI CCNGG 1 cut(s) 271
SetI ASST 5 cut(s) 232, 284, 354, 398, 412
SfaNI GCATC 1 cut(s) 175
SmiMI CAYNNNNRTG 1 cut(s) 252
Sse9I AATT 2 cut(s) 235, 292
SsiI CCGC 1 cut(s) 174
SspI AATATT 1 cut(s) 37
StyD4I CCNGG 1 cut(s) 269
TaaI ACNGT 1 cut(s) 406
TaiI ACGT 2 cut(s) 354, 398
TaqI TCGA 2 cut(s) 32, 65
TasI AATT 2 cut(s) 235, 292
TseI GCWGC 1 cut(s) 50
TspGWI ACGGA 8 cut(s) 139, 144, 174, 184, 238, 264, 372, 373
XapI RAATTY 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.