pycom07g23200

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
24212130 .. 24212473
344 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g23200.2

Sequence Viewer

Length: 303 bp
ATGGTGTGCAAACGGGACGGGACGGAACAGAATGGGACGGGACAGGACGGGACGGAACGGAGCGGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGTTATAATTTTGTGTTCCACGGATGTGGAACAAGTCGTTCCAGGGGGGTGAGGTGGAACGAAAATTCACCCAAAACTCGTCCCGTGGAACAGCTCATTCCACCCGTTTTAGGCGCACCAAACGTGGGACGGAACGCCTTGTCCCACTCTGTTCCGTCCCATCCCACGTACCAAACGGTACCTTAA

Protein Analysis

101

Amino Acids

11.04

Weight (kDa)

11.1

Isoelectric Point (pI)

83.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 123
Acc65I GGTACC 1 cut(s) 295
AccB1I GGYRCC 1 cut(s) 295
AccBSI CCGCTC 1 cut(s) 63
AciI CCGC 1 cut(s) 63
AcsI RAATTY 1 cut(s) 181
AfaI GTAC 2 cut(s) 287, 297
AfiI CCNNNNNNNGG 3 cut(s) 84, 227, 242
AjnI CCWGG 1 cut(s) 158
AleI CACNNNNGTG 1 cut(s) 141
AloI GAACNNNNNNTCC 2 cut(s) 242, 274
AluBI AGCT 1 cut(s) 211
AluI AGCT 1 cut(s) 211
Alw26I GTCTC 1 cut(s) 103
ApoI RAATTY 1 cut(s) 181
Asp718I GGTACC 1 cut(s) 295
AspLEI GCGC 1 cut(s) 233
AsuHPI GGTGA 2 cut(s) 177, 178
BanI GGYRCC 1 cut(s) 295
BccI CCATC 2 cut(s) 78, 285
BciT130I CCWGG 1 cut(s) 160
BcoDI GTCTC 1 cut(s) 103
Bme1390I CCNGG 1 cut(s) 160
BmiI GGNNCC 1 cut(s) 297
BmrFI CCNGG 1 cut(s) 160
BmsI GCATC 1 cut(s) 64
BsaAI YACGTR 1 cut(s) 285
BsaJI CCNNGG 4 cut(s) 79, 136, 159, 201
Bsc4I CCNNNNNNNGG 3 cut(s) 84, 227, 242
BseBI CCWGG 1 cut(s) 160
BseDI CCNNGG 4 cut(s) 79, 136, 159, 201
BseGI GGATG 3 cut(s) 89, 146, 277
BseLI CCNNNNNNNGG 3 cut(s) 84, 227, 242
BshNI GGYRCC 1 cut(s) 295
BslFI GGGAC 9 cut(s) 29, 34, 49, 54, 64, 183, 244, 258, 259
BslI CCNNNNNNNGG 3 cut(s) 84, 227, 242
BsmAI GTCTC 1 cut(s) 103
BsmBI CGTCTC 1 cut(s) 103
BsmFI GGGAC 9 cut(s) 29, 34, 49, 54, 64, 183, 244, 258, 259
BspACI CCGC 1 cut(s) 63
BspLI GGNNCC 1 cut(s) 297
BspT107I GGYRCC 1 cut(s) 295
BsrBI CCGCTC 1 cut(s) 63
BssECI CCNNGG 4 cut(s) 79, 136, 159, 201
Bst2UI CCWGG 1 cut(s) 160
Bst4CI ACNGT 1 cut(s) 295
BstBAI YACGTR 1 cut(s) 285
BstDSI CCRYGG 2 cut(s) 136, 201
BstF5I GGATG 3 cut(s) 89, 146, 277
BstHHI GCGC 1 cut(s) 233
BstMAI GTCTC 1 cut(s) 103
BstNI CCWGG 1 cut(s) 160
BstSCI CCNGG 1 cut(s) 158
BstXI CCANNNNNNTGG 1 cut(s) 143
BtgI CCRYGG 2 cut(s) 136, 201
BtsCI GGATG 3 cut(s) 89, 146, 277
CfoI GCGC 1 cut(s) 233
Csp6I GTAC 2 cut(s) 286, 296
CviJI RGCY 1 cut(s) 211
CviKI_1 RGCY 1 cut(s) 211
CviQI GTAC 2 cut(s) 286, 296
EcoRII CCWGG 1 cut(s) 158
Esp3I CGTCTC 1 cut(s) 103
FaiI YATR 1 cut(s) 123
FaqI GGGAC 9 cut(s) 29, 34, 49, 54, 64, 183, 244, 258, 259
FauI CCCGC 1 cut(s) 56
FokI GGATG 3 cut(s) 96, 153, 264
GlaI GCGC 1 cut(s) 232
HhaI GCGC 1 cut(s) 233
Hin6I GCGC 1 cut(s) 231
HinP1I GCGC 1 cut(s) 231
HphI GGTGA 2 cut(s) 177, 178
Hpy188I TCNGA 1 cut(s) 83
HpyAV CCTTC 1 cut(s) 99
HpyCH4III ACNGT 1 cut(s) 295
HpyCH4IV ACGT 2 cut(s) 240, 284
HpyCH4V TGCA 1 cut(s) 9
HpySE526I ACGT 2 cut(s) 240, 284
HspAI GCGC 1 cut(s) 231
KpnI GGTACC 1 cut(s) 299
LmnI GCTCC 2 cut(s) 60, 66
LpnPI CCDG 3 cut(s) 29, 145, 172
LweI GCATC 1 cut(s) 64
MaeII ACGT 2 cut(s) 240, 284
MbiI CCGCTC 1 cut(s) 63
MboII GAAGA 2 cut(s) 111, 114
MluCI AATT 2 cut(s) 124, 181
MnlI CCTC 4 cut(s) 89, 89, 110, 162
MseI TTAA 1 cut(s) 301
MslI CAYNNNNRTG 1 cut(s) 141
MspR9I CCNGG 1 cut(s) 160
MvaI CCWGG 1 cut(s) 160
NlaIV GGNNCC 1 cut(s) 297
OliI CACNNNNGTG 1 cut(s) 141
Ppu21I YACGTR 1 cut(s) 285
PsiI TTATAA 1 cut(s) 123
Psp6I CCWGG 1 cut(s) 158
PspGI CCWGG 1 cut(s) 158
PspN4I GGNNCC 1 cut(s) 297
RsaI GTAC 2 cut(s) 287, 297
RsaNI GTAC 2 cut(s) 286, 296
RseI CAYNNNNRTG 1 cut(s) 141
SaqAI TTAA 1 cut(s) 301
ScrFI CCNGG 1 cut(s) 160
SetI ASST 6 cut(s) 121, 173, 213, 243, 287, 301
SfaNI GCATC 1 cut(s) 64
SmiMI CAYNNNNRTG 1 cut(s) 141
Sse9I AATT 2 cut(s) 124, 181
SsiI CCGC 1 cut(s) 63
StyD4I CCNGG 1 cut(s) 158
TaaI ACNGT 1 cut(s) 295
TaiI ACGT 2 cut(s) 243, 287
TasI AATT 2 cut(s) 124, 181
Tru1I TTAA 1 cut(s) 301
Tru9I TTAA 1 cut(s) 301
TspGWI ACGGA 7 cut(s) 38, 68, 73, 127, 153, 261, 262
XapI RAATTY 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.