pycom02g22360

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0001410
Physical Location & Seq
Forward (+)
20486973 .. 20487899
927 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g22360.1

Sequence Viewer

Length: 393 bp
ATGGATGACGTGCTACAATTTCAAGCATCTAATAGACAATGTTCCTCACGGTCTTTGTTCTTGATGTCGATCTGGGAAGCAGCAGTATCGTTTGGTATGCAGACGGGACGGGACGGAACGGAACGCAGTTGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGTTATAGTTTTGTGTTCCACGGATGTGGAACAAGTCGTTCCAGGGGGGTGAGGTGGAATGAAAATTCACCCAAAACTCGTCCCGTGGAACAGCTCGTTCCACCCATTTTAGGCGCACTAAACGTGGGACAGAACGCCTTGTCCCACTCTGTTCCGTCCTGTCCCATGTACCAAACGGTACCTGAGTCAACAAAAGGAGTGGTGAAGTGA

Protein Analysis

131

Amino Acids

14.53

Weight (kDa)

10.59

Isoelectric Point (pI)

82.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 361
AccB1I GGYRCC 1 cut(s) 361
AcsI RAATTY 1 cut(s) 247
AfaI GTAC 2 cut(s) 353, 363
AfiI CCNNNNNNNGG 2 cut(s) 150, 293
AgsI TTSAA 1 cut(s) 23
AjiI CACGTC 1 cut(s) 10
AjnI CCWGG 1 cut(s) 224
AleI CACNNNNGTG 1 cut(s) 207
AloI GAACNNNNNNTCC 2 cut(s) 308, 340
AluBI AGCT 1 cut(s) 277
AluI AGCT 1 cut(s) 277
Alw26I GTCTC 1 cut(s) 169
ApeKI GCWGC 1 cut(s) 80
ApoI RAATTY 1 cut(s) 247
Asp718I GGTACC 1 cut(s) 361
AspLEI GCGC 1 cut(s) 299
AsuHPI GGTGA 2 cut(s) 243, 244
BaeI ACNNNNGTAYC 2 cut(s) 353, 386
BanI GGYRCC 1 cut(s) 361
BbvI GCAGC 1 cut(s) 92
BccI CCATC 1 cut(s) 144
BcgI CGANNNNNNTGC 2 cut(s) 69, 103
BciT130I CCWGG 1 cut(s) 226
BcoDI GTCTC 1 cut(s) 169
BisI GCNGC 1 cut(s) 81
BlsI GCNGC 1 cut(s) 82
Bme1390I CCNGG 1 cut(s) 226
BmgBI CACGTC 1 cut(s) 10
BmiI GGNNCC 1 cut(s) 363
BmrFI CCNGG 1 cut(s) 226
BmsI GCATC 2 cut(s) 35, 130
BsaBI GATNNNNATC 1 cut(s) 68
BsaJI CCNNGG 4 cut(s) 145, 202, 225, 267
Bsc4I CCNNNNNNNGG 2 cut(s) 150, 293
Bse8I GATNNNNATC 1 cut(s) 68
BseBI CCWGG 1 cut(s) 226
BseDI CCNNGG 4 cut(s) 145, 202, 225, 267
BseGI GGATG 3 cut(s) 10, 155, 212
BseJI GATNNNNATC 1 cut(s) 68
BseLI CCNNNNNNNGG 2 cut(s) 150, 293
BseMII CTCAG 1 cut(s) 357
BseXI GCAGC 1 cut(s) 92
BshNI GGYRCC 1 cut(s) 361
BslFI GGGAC 6 cut(s) 120, 125, 249, 310, 324, 330
BslI CCNNNNNNNGG 2 cut(s) 150, 293
BsmAI GTCTC 1 cut(s) 169
BsmBI CGTCTC 1 cut(s) 169
BsmFI GGGAC 6 cut(s) 120, 125, 249, 310, 324, 330
Bsp143I GATC 1 cut(s) 69
BspCNI CTCAG 1 cut(s) 358
BspLI GGNNCC 1 cut(s) 363
BspT107I GGYRCC 1 cut(s) 361
BssECI CCNNGG 4 cut(s) 145, 202, 225, 267
BssMI GATC 1 cut(s) 69
Bst2UI CCWGG 1 cut(s) 226
Bst4CI ACNGT 2 cut(s) 51, 361
BstDEI CTNAG 1 cut(s) 366
BstDSI CCRYGG 2 cut(s) 202, 267
BstF5I GGATG 3 cut(s) 10, 155, 212
BstHHI GCGC 1 cut(s) 299
BstKTI GATC 1 cut(s) 72
BstMAI GTCTC 1 cut(s) 169
BstMBI GATC 1 cut(s) 69
BstMWI GCNNNNNNNGC 1 cut(s) 132
BstNI CCWGG 1 cut(s) 226
BstSCI CCNGG 1 cut(s) 224
BstV1I GCAGC 1 cut(s) 92
BstXI CCANNNNNNTGG 1 cut(s) 209
BtgI CCRYGG 2 cut(s) 202, 267
BtrI CACGTC 1 cut(s) 10
BtsCI GGATG 3 cut(s) 10, 155, 212
CfoI GCGC 1 cut(s) 299
Csp6I GTAC 2 cut(s) 352, 362
CspCI CAANNNNNGTGG 1 cut(s) 363
CviAII CATG 1 cut(s) 349
CviJI RGCY 1 cut(s) 277
CviKI_1 RGCY 1 cut(s) 277
CviQI GTAC 2 cut(s) 352, 362
DdeI CTNAG 1 cut(s) 366
DpnI GATC 1 cut(s) 71
DpnII GATC 1 cut(s) 69
EcoRII CCWGG 1 cut(s) 224
Esp3I CGTCTC 1 cut(s) 169
FaeI CATG 1 cut(s) 352
FaiI YATR 3 cut(s) 98, 189, 350
FaqI GGGAC 6 cut(s) 120, 125, 249, 310, 324, 330
FatI CATG 1 cut(s) 348
Fnu4HI GCNGC 1 cut(s) 81
FokI GGATG 3 cut(s) 17, 162, 219
Fsp4HI GCNGC 1 cut(s) 81
GlaI GCGC 1 cut(s) 298
GluI GCNGC 1 cut(s) 81
HhaI GCGC 1 cut(s) 299
Hin1II CATG 1 cut(s) 352
Hin6I GCGC 1 cut(s) 297
HinP1I GCGC 1 cut(s) 297
HincII GTYRAC 1 cut(s) 372
HindII GTYRAC 1 cut(s) 372
HinfI GANTC 1 cut(s) 368
HphI GGTGA 2 cut(s) 243, 244
Hpy166II GTNNAC 1 cut(s) 372
Hpy188I TCNGA 1 cut(s) 149
Hpy188III TCNNGA 1 cut(s) 61
Hpy8I GTNNAC 1 cut(s) 372
HpyAV CCTTC 1 cut(s) 165
HpyCH4III ACNGT 2 cut(s) 51, 361
HpyCH4IV ACGT 2 cut(s) 9, 306
HpyCH4V TGCA 1 cut(s) 100
HpyF10VI GCNNNNNNNGC 1 cut(s) 132
HpyF3I CTNAG 1 cut(s) 366
HpySE526I ACGT 2 cut(s) 9, 306
Hsp92II CATG 1 cut(s) 352
HspAI GCGC 1 cut(s) 297
KpnI GGTACC 1 cut(s) 365
Kzo9I GATC 1 cut(s) 69
LmnI GCTCC 1 cut(s) 132
LpnPI CCDG 5 cut(s) 58, 211, 238, 355, 378
Lsp1109I GCAGC 1 cut(s) 92
LweI GCATC 2 cut(s) 35, 130
MaeII ACGT 2 cut(s) 9, 306
MalI GATC 1 cut(s) 71
MboI GATC 1 cut(s) 69
MboII GAAGA 2 cut(s) 177, 180
MluCI AATT 2 cut(s) 17, 247
MlyI GAGTC 1 cut(s) 377
MmeI TCCRAC 1 cut(s) 110
MnlI CCTC 5 cut(s) 55, 155, 155, 176, 228
MslI CAYNNNNRTG 1 cut(s) 207
MspR9I CCNGG 1 cut(s) 226
MvaI CCWGG 1 cut(s) 226
MwoI GCNNNNNNNGC 1 cut(s) 132
NdeII GATC 1 cut(s) 69
NlaIII CATG 1 cut(s) 352
NlaIV GGNNCC 1 cut(s) 363
OliI CACNNNNGTG 1 cut(s) 207
PkrI GCNGC 1 cut(s) 82
PleI GAGTC 1 cut(s) 376
PpsI GAGTC 1 cut(s) 376
Psp6I CCWGG 1 cut(s) 224
PspGI CCWGG 1 cut(s) 224
PspN4I GGNNCC 1 cut(s) 363
RsaI GTAC 2 cut(s) 353, 363
RsaNI GTAC 2 cut(s) 352, 362
RseI CAYNNNNRTG 1 cut(s) 207
SatI GCNGC 1 cut(s) 81
Sau3AI GATC 1 cut(s) 69
SchI GAGTC 1 cut(s) 377
ScrFI CCNGG 1 cut(s) 226
SetI ASST 6 cut(s) 12, 187, 239, 279, 309, 367
SfaNI GCATC 2 cut(s) 35, 130
SmiMI CAYNNNNRTG 1 cut(s) 207
Sse9I AATT 2 cut(s) 17, 247
StyD4I CCNGG 1 cut(s) 224
TaaI ACNGT 2 cut(s) 51, 361
TaiI ACGT 2 cut(s) 12, 309
TaqI TCGA 1 cut(s) 68
TasI AATT 2 cut(s) 17, 247
TseI GCWGC 1 cut(s) 80
TspDTI ATGAA 1 cut(s) 258
TspGWI ACGGA 5 cut(s) 129, 134, 193, 219, 327
XapI RAATTY 1 cut(s) 247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.