pycom05g15180

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
18679409 .. 18679887
479 bp
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UTR
Exon/CDS
Intron
pycom05g15180.2

Sequence Viewer

Length: 309 bp
ATGTGGTTGAGTTCAGTTTTATGCTTGTTGTTTGACGGGACGGGACGGAGCGGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGTGGTTATAATTTTGTGTTCCACGGATGTGGAACGAGTCGTTCCAGGGGGGTGAGGTGGAACGAAAATTCACCCAAAACTCGTCCCGTGGAACAGCTCGTTCCACCTGTTTTAGGCGCACCAAACGTGGGACGGAACGCCTTGTCCCACTCTGTTCCGTCCCGTCCCACGTACCAAACGGTACCTAAAAGCATGAGGCGTGGGTGA

Protein Analysis

103

Amino Acids

11.31

Weight (kDa)

11.76

Isoelectric Point (pI)

90.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 111
Acc65I GGTACC 1 cut(s) 283
AccB1I GGYRCC 1 cut(s) 283
AccBSI CCGCTC 1 cut(s) 51
AciI CCGC 1 cut(s) 51
AcsI RAATTY 1 cut(s) 169
AfaI GTAC 2 cut(s) 275, 285
AfiI CCNNNNNNNGG 3 cut(s) 72, 215, 230
AjnI CCWGG 1 cut(s) 146
AleI CACNNNNGTG 1 cut(s) 129
AloI GAACNNNNNNTCC 2 cut(s) 230, 262
AluBI AGCT 1 cut(s) 199
AluI AGCT 1 cut(s) 199
Alw26I GTCTC 1 cut(s) 91
ApoI RAATTY 1 cut(s) 169
Asp718I GGTACC 1 cut(s) 283
AspLEI GCGC 1 cut(s) 221
AsuHPI GGTGA 2 cut(s) 165, 166
BanI GGYRCC 1 cut(s) 283
BccI CCATC 1 cut(s) 66
BciT130I CCWGG 1 cut(s) 148
BcoDI GTCTC 1 cut(s) 91
Bme1390I CCNGG 1 cut(s) 148
BmiI GGNNCC 1 cut(s) 285
BmrFI CCNGG 1 cut(s) 148
BmsI GCATC 1 cut(s) 52
BsaAI YACGTR 1 cut(s) 273
BsaJI CCNNGG 4 cut(s) 67, 124, 147, 189
BsaXI ACNNNNNCTCC 2 cut(s) 88, 118
Bsc4I CCNNNNNNNGG 3 cut(s) 72, 215, 230
BseBI CCWGG 1 cut(s) 148
BseDI CCNNGG 4 cut(s) 67, 124, 147, 189
BseGI GGATG 2 cut(s) 77, 134
BseLI CCNNNNNNNGG 3 cut(s) 72, 215, 230
BshNI GGYRCC 1 cut(s) 283
BslFI GGGAC 7 cut(s) 52, 57, 171, 232, 246, 247, 252
BslI CCNNNNNNNGG 3 cut(s) 72, 215, 230
BsmAI GTCTC 1 cut(s) 91
BsmBI CGTCTC 1 cut(s) 91
BsmFI GGGAC 7 cut(s) 52, 57, 171, 232, 246, 247, 252
BspACI CCGC 1 cut(s) 51
BspLI GGNNCC 1 cut(s) 285
BspT107I GGYRCC 1 cut(s) 283
BsrBI CCGCTC 1 cut(s) 51
BssECI CCNNGG 4 cut(s) 67, 124, 147, 189
Bst2UI CCWGG 1 cut(s) 148
Bst4CI ACNGT 1 cut(s) 283
BstBAI YACGTR 1 cut(s) 273
BstDSI CCRYGG 2 cut(s) 124, 189
BstENI CCTNNNNNAGG 1 cut(s) 213
BstF5I GGATG 2 cut(s) 77, 134
BstHHI GCGC 1 cut(s) 221
BstMAI GTCTC 1 cut(s) 91
BstNI CCWGG 1 cut(s) 148
BstSCI CCNGG 1 cut(s) 146
BstXI CCANNNNNNTGG 1 cut(s) 131
BtgI CCRYGG 2 cut(s) 124, 189
BtsCI GGATG 2 cut(s) 77, 134
CfoI GCGC 1 cut(s) 221
Csp6I GTAC 2 cut(s) 274, 284
CviAII CATG 1 cut(s) 295
CviJI RGCY 1 cut(s) 199
CviKI_1 RGCY 1 cut(s) 199
CviQI GTAC 2 cut(s) 274, 284
EcoNI CCTNNNNNAGG 1 cut(s) 213
EcoRII CCWGG 1 cut(s) 146
Esp3I CGTCTC 1 cut(s) 91
FaeI CATG 1 cut(s) 298
FaiI YATR 3 cut(s) 22, 111, 296
FaqI GGGAC 7 cut(s) 52, 57, 171, 232, 246, 247, 252
FatI CATG 1 cut(s) 294
FauI CCCGC 1 cut(s) 44
FokI GGATG 2 cut(s) 84, 141
GlaI GCGC 1 cut(s) 220
HhaI GCGC 1 cut(s) 221
Hin1II CATG 1 cut(s) 298
Hin6I GCGC 1 cut(s) 219
HinP1I GCGC 1 cut(s) 219
HinfI GANTC 1 cut(s) 139
HphI GGTGA 2 cut(s) 165, 166
Hpy188I TCNGA 1 cut(s) 71
HpyAV CCTTC 1 cut(s) 87
HpyCH4III ACNGT 1 cut(s) 283
HpyCH4IV ACGT 2 cut(s) 228, 272
HpySE526I ACGT 2 cut(s) 228, 272
Hsp92II CATG 1 cut(s) 298
HspAI GCGC 1 cut(s) 219
KpnI GGTACC 1 cut(s) 287
LmnI GCTCC 2 cut(s) 48, 54
LpnPI CCDG 3 cut(s) 133, 160, 222
LweI GCATC 1 cut(s) 52
MaeII ACGT 2 cut(s) 228, 272
MbiI CCGCTC 1 cut(s) 51
MboII GAAGA 2 cut(s) 99, 102
MluCI AATT 2 cut(s) 112, 169
MlyI GAGTC 1 cut(s) 148
MnlI CCTC 4 cut(s) 77, 77, 150, 291
MslI CAYNNNNRTG 1 cut(s) 129
MspR9I CCNGG 1 cut(s) 148
MvaI CCWGG 1 cut(s) 148
NlaIII CATG 1 cut(s) 298
NlaIV GGNNCC 1 cut(s) 285
OliI CACNNNNGTG 1 cut(s) 129
PleI GAGTC 1 cut(s) 147
PpsI GAGTC 1 cut(s) 147
Ppu21I YACGTR 1 cut(s) 273
PsiI TTATAA 1 cut(s) 111
Psp6I CCWGG 1 cut(s) 146
PspGI CCWGG 1 cut(s) 146
PspN4I GGNNCC 1 cut(s) 285
RsaI GTAC 2 cut(s) 275, 285
RsaNI GTAC 2 cut(s) 274, 284
RseI CAYNNNNRTG 1 cut(s) 129
SchI GAGTC 1 cut(s) 148
ScrFI CCNGG 1 cut(s) 148
SetI ASST 6 cut(s) 161, 201, 211, 231, 275, 289
SfaNI GCATC 1 cut(s) 52
SmiMI CAYNNNNRTG 1 cut(s) 129
Sse9I AATT 2 cut(s) 112, 169
SsiI CCGC 1 cut(s) 51
StyD4I CCNGG 1 cut(s) 146
TaaI ACNGT 1 cut(s) 283
TaiI ACGT 2 cut(s) 231, 275
TasI AATT 2 cut(s) 112, 169
TspGWI ACGGA 5 cut(s) 61, 115, 141, 249, 250
XagI CCTNNNNNAGG 1 cut(s) 213
XapI RAATTY 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.