pycom11g15130

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
15664695 .. 15664994
300 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g15130.1

Sequence Viewer

Length: 300 bp
ATGGGACGGGACAAGACGGGACAGGACGGAACGGAACGGAGTGGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGTTATAATTTTGTGTTCCACGGATGTGGAACGAGTCGTTCCAGGGGGGTGAGGTGGAACGAAAATTCACCTAAAACTCGTCCTGTGGAACAGCTCGTTCCACCCGTTTTAGGCACACCAAACGTGGGACGGAACGCCTTGTCCCACTCTGTTCCGTCCCGTCATACGTACCAAACGGTACCTTATACCCTTATATTCCTCTAG

Protein Analysis

100

Amino Acids

11.14

Weight (kDa)

11.48

Isoelectric Point (pI)

82.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 102
Acc65I GGTACC 1 cut(s) 274
AccB1I GGYRCC 1 cut(s) 274
AcsI RAATTY 1 cut(s) 160
AfaI GTAC 2 cut(s) 266, 276
AfiI CCNNNNNNNGG 3 cut(s) 63, 206, 221
AjnI CCWGG 1 cut(s) 137
AleI CACNNNNGTG 1 cut(s) 120
AloI GAACNNNNNNTCC 2 cut(s) 221, 253
AluBI AGCT 1 cut(s) 190
AluI AGCT 1 cut(s) 190
Alw26I GTCTC 1 cut(s) 82
ApoI RAATTY 1 cut(s) 160
Asp718I GGTACC 1 cut(s) 274
AsuHPI GGTGA 2 cut(s) 156, 157
BanI GGYRCC 1 cut(s) 274
BccI CCATC 1 cut(s) 57
BciT130I CCWGG 1 cut(s) 139
BcoDI GTCTC 1 cut(s) 82
BfaI CTAG 1 cut(s) 298
Bme1390I CCNGG 1 cut(s) 139
BmiI GGNNCC 1 cut(s) 276
BmrFI CCNGG 1 cut(s) 139
BmsI GCATC 1 cut(s) 43
BsaAI YACGTR 1 cut(s) 264
BsaJI CCNNGG 3 cut(s) 58, 115, 138
Bsc4I CCNNNNNNNGG 3 cut(s) 63, 206, 221
BseBI CCWGG 1 cut(s) 139
BseDI CCNNGG 3 cut(s) 58, 115, 138
BseGI GGATG 2 cut(s) 68, 125
BseLI CCNNNNNNNGG 3 cut(s) 63, 206, 221
BshNI GGYRCC 1 cut(s) 274
BslFI GGGAC 6 cut(s) 18, 23, 33, 223, 237, 238
BslI CCNNNNNNNGG 3 cut(s) 63, 206, 221
BsmAI GTCTC 1 cut(s) 82
BsmBI CGTCTC 1 cut(s) 82
BsmFI GGGAC 6 cut(s) 18, 23, 33, 223, 237, 238
BspLI GGNNCC 1 cut(s) 276
BspT107I GGYRCC 1 cut(s) 274
BssECI CCNNGG 3 cut(s) 58, 115, 138
Bst2UI CCWGG 1 cut(s) 139
Bst4CI ACNGT 1 cut(s) 274
BstBAI YACGTR 1 cut(s) 264
BstDSI CCRYGG 1 cut(s) 115
BstF5I GGATG 2 cut(s) 68, 125
BstMAI GTCTC 1 cut(s) 82
BstNI CCWGG 1 cut(s) 139
BstSCI CCNGG 1 cut(s) 137
BstSNI TACGTA 1 cut(s) 264
BstXI CCANNNNNNTGG 1 cut(s) 122
BtgI CCRYGG 1 cut(s) 115
BtsCI GGATG 2 cut(s) 68, 125
Csp6I GTAC 2 cut(s) 265, 275
CviJI RGCY 1 cut(s) 190
CviKI_1 RGCY 1 cut(s) 190
CviQI GTAC 2 cut(s) 265, 275
Eco105I TACGTA 1 cut(s) 264
EcoRII CCWGG 1 cut(s) 137
Esp3I CGTCTC 1 cut(s) 82
FaiI YATR 4 cut(s) 102, 261, 282, 290
FaqI GGGAC 6 cut(s) 18, 23, 33, 223, 237, 238
FokI GGATG 2 cut(s) 75, 132
FspBI CTAG 1 cut(s) 298
HinfI GANTC 1 cut(s) 130
HphI GGTGA 2 cut(s) 156, 157
Hpy188I TCNGA 1 cut(s) 62
HpyAV CCTTC 1 cut(s) 78
HpyCH4III ACNGT 1 cut(s) 274
HpyCH4IV ACGT 2 cut(s) 219, 263
HpySE526I ACGT 2 cut(s) 219, 263
KpnI GGTACC 1 cut(s) 278
LmnI GCTCC 1 cut(s) 45
LpnPI CCDG 4 cut(s) 8, 124, 151, 192
LweI GCATC 1 cut(s) 43
MaeI CTAG 1 cut(s) 298
MaeII ACGT 2 cut(s) 219, 263
MboII GAAGA 2 cut(s) 90, 93
MluCI AATT 2 cut(s) 103, 160
MlyI GAGTC 1 cut(s) 139
MnlI CCTC 4 cut(s) 68, 68, 89, 141
MslI CAYNNNNRTG 1 cut(s) 120
MspR9I CCNGG 1 cut(s) 139
MvaI CCWGG 1 cut(s) 139
NlaIV GGNNCC 1 cut(s) 276
OliI CACNNNNGTG 1 cut(s) 120
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PleI GAGTC 1 cut(s) 138
PpsI GAGTC 1 cut(s) 138
Ppu21I YACGTR 1 cut(s) 264
PsiI TTATAA 1 cut(s) 102
Psp6I CCWGG 1 cut(s) 137
PspGI CCWGG 1 cut(s) 137
PspN4I GGNNCC 1 cut(s) 276
RsaI GTAC 2 cut(s) 266, 276
RsaNI GTAC 2 cut(s) 265, 275
RseI CAYNNNNRTG 1 cut(s) 120
SchI GAGTC 1 cut(s) 139
ScrFI CCNGG 1 cut(s) 139
SetI ASST 7 cut(s) 100, 152, 169, 192, 222, 266, 280
SfaNI GCATC 1 cut(s) 43
SmiMI CAYNNNNRTG 1 cut(s) 120
SnaBI TACGTA 1 cut(s) 264
Sse9I AATT 2 cut(s) 103, 160
SspMI CTAG 1 cut(s) 298
StyD4I CCNGG 1 cut(s) 137
TaaI ACNGT 1 cut(s) 274
TaiI ACGT 2 cut(s) 222, 266
TasI AATT 2 cut(s) 103, 160
TspGWI ACGGA 7 cut(s) 42, 47, 52, 106, 132, 240, 241
XapI RAATTY 1 cut(s) 160
XspI CTAG 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.