pycom02g11900

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
8494802 .. 8495029
228 bp
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UTR
Exon/CDS
Intron
pycom02g11900.1

Sequence Viewer

Length: 228 bp
ATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAAAGGTTATAATTTTGTGTTCCACGGATGTGGAACGAGTCGTTCCAGGGGTGAGGTGGAACGAAAATTCACCCAAAACTCGTCTCGTGGAACAACTCGTTCCACCCGTTTTAGGCGCACCAAACGTGGGACGGAACGCCTTATCCCACTCTGTTCCGTCCCGTCCCATGTACCAAATGATACCTTAG

Protein Analysis

76

Amino Acids

8.22

Weight (kDa)

5.24

Isoelectric Point (pI)

75.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 50
AcsI RAATTY 1 cut(s) 106
AfaI GTAC 1 cut(s) 212
AfiI CCNNNNNNNGG 3 cut(s) 11, 152, 167
AjnI CCWGG 1 cut(s) 85
AleI CACNNNNGTG 1 cut(s) 68
AloI GAACNNNNNNTCC 2 cut(s) 167, 199
Alw26I GTCTC 2 cut(s) 30, 128
ApoI RAATTY 1 cut(s) 106
AspLEI GCGC 1 cut(s) 158
AsuHPI GGTGA 2 cut(s) 102, 103
BauI CACGAG 1 cut(s) 125
BccI CCATC 1 cut(s) 5
BciT130I CCWGG 1 cut(s) 87
BcoDI GTCTC 2 cut(s) 30, 128
Bme1390I CCNGG 1 cut(s) 87
BmrFI CCNGG 1 cut(s) 87
BsaJI CCNNGG 3 cut(s) 6, 63, 86
Bsc4I CCNNNNNNNGG 3 cut(s) 11, 152, 167
BseBI CCWGG 1 cut(s) 87
BseDI CCNNGG 3 cut(s) 6, 63, 86
BseGI GGATG 2 cut(s) 16, 73
BseLI CCNNNNNNNGG 3 cut(s) 11, 152, 167
BslFI GGGAC 3 cut(s) 183, 184, 189
BslI CCNNNNNNNGG 3 cut(s) 11, 152, 167
BsmAI GTCTC 2 cut(s) 30, 128
BsmBI CGTCTC 2 cut(s) 30, 128
BsmFI GGGAC 3 cut(s) 183, 184, 189
BssECI CCNNGG 3 cut(s) 6, 63, 86
BssSI CACGAG 1 cut(s) 125
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 1 cut(s) 87
BstDEI CTNAG 1 cut(s) 225
BstDSI CCRYGG 1 cut(s) 63
BstF5I GGATG 2 cut(s) 16, 73
BstHHI GCGC 1 cut(s) 158
BstMAI GTCTC 2 cut(s) 30, 128
BstNI CCWGG 1 cut(s) 87
BstSCI CCNGG 1 cut(s) 85
BstXI CCANNNNNNTGG 1 cut(s) 70
BtgI CCRYGG 1 cut(s) 63
BtsCI GGATG 2 cut(s) 16, 73
CfoI GCGC 1 cut(s) 158
Csp6I GTAC 1 cut(s) 211
CviAII CATG 1 cut(s) 208
CviQI GTAC 1 cut(s) 211
DdeI CTNAG 1 cut(s) 225
EcoRII CCWGG 1 cut(s) 85
Esp3I CGTCTC 2 cut(s) 30, 128
FaeI CATG 1 cut(s) 211
FaiI YATR 2 cut(s) 50, 209
FaqI GGGAC 3 cut(s) 183, 184, 189
FatI CATG 1 cut(s) 207
FokI GGATG 2 cut(s) 23, 80
GlaI GCGC 1 cut(s) 157
HhaI GCGC 1 cut(s) 158
Hin1II CATG 1 cut(s) 211
Hin6I GCGC 1 cut(s) 156
HinP1I GCGC 1 cut(s) 156
HinfI GANTC 1 cut(s) 78
HphI GGTGA 2 cut(s) 102, 103
Hpy188I TCNGA 1 cut(s) 10
HpyAV CCTTC 1 cut(s) 26
HpyCH4IV ACGT 1 cut(s) 165
HpyF3I CTNAG 1 cut(s) 225
HpySE526I ACGT 1 cut(s) 165
Hsp92II CATG 1 cut(s) 211
HspAI GCGC 1 cut(s) 156
LpnPI CCDG 2 cut(s) 72, 99
MaeII ACGT 1 cut(s) 165
MboII GAAGA 2 cut(s) 38, 41
MluCI AATT 2 cut(s) 51, 106
MlyI GAGTC 1 cut(s) 87
MnlI CCTC 3 cut(s) 16, 16, 87
MslI CAYNNNNRTG 1 cut(s) 68
MspR9I CCNGG 1 cut(s) 87
MvaI CCWGG 1 cut(s) 87
NlaIII CATG 1 cut(s) 211
OliI CACNNNNGTG 1 cut(s) 68
PcsI WCGNNNNNNNCGW 1 cut(s) 144
PleI GAGTC 1 cut(s) 86
PpsI GAGTC 1 cut(s) 86
PsiI TTATAA 1 cut(s) 50
Psp6I CCWGG 1 cut(s) 85
PspGI CCWGG 1 cut(s) 85
RsaI GTAC 1 cut(s) 212
RsaNI GTAC 1 cut(s) 211
RseI CAYNNNNRTG 1 cut(s) 68
SchI GAGTC 1 cut(s) 87
ScrFI CCNGG 1 cut(s) 87
SetI ASST 4 cut(s) 48, 98, 168, 226
SmiMI CAYNNNNRTG 1 cut(s) 68
Sse9I AATT 2 cut(s) 51, 106
StyD4I CCNGG 1 cut(s) 85
TaiI ACGT 1 cut(s) 168
TasI AATT 2 cut(s) 51, 106
TspGWI ACGGA 4 cut(s) 54, 80, 186, 187
XapI RAATTY 1 cut(s) 106
XcmI CCANNNNNNNNNTGG 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.