pycom06g18880

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
22456014 .. 22456911
898 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g18880.2

Sequence Viewer

Length: 366 bp
ATGGTGGTGATGATGGAGAATTCCTTCTTTTATGCAGACGGGACGGGACGGAACGGAATGGGACGGGACGGGACGGGACAGGACGGAACGGAACGGAGCGGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGTTATAATTTTGTGTTCCACGGATGTGGAACGAGTCGTTCCAGGGGGATGAGGTGGAACGAAAATTCACCCAAAACTCATCCCGCGGAACAGCTCGTTCCACCCGTTTTAGGTGCACCAAACGTGGGACGGAACGCCTTGTCCCACTCTATTCCGTCCCGTCCCACGTACCAAACGGTACCTTATTGCCCACAATCTTGGACTGTTAACTAG

Protein Analysis

122

Amino Acids

13.43

Weight (kDa)

10.58

Isoelectric Point (pI)

75.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 159
Acc65I GGTACC 1 cut(s) 331
AccB1I GGYRCC 1 cut(s) 331
AccBSI CCGCTC 1 cut(s) 99
AccII CGCG 1 cut(s) 239
AciI CCGC 3 cut(s) 99, 237, 239
AcsI RAATTY 2 cut(s) 19, 217
AfaI GTAC 2 cut(s) 323, 333
AfiI CCNNNNNNNGG 3 cut(s) 120, 263, 278
AjnI CCWGG 1 cut(s) 194
AleI CACNNNNGTG 1 cut(s) 177
AloI GAACNNNNNNTCC 2 cut(s) 278, 310
AluBI AGCT 1 cut(s) 247
AluI AGCT 1 cut(s) 247
Alw21I GWGCWC 1 cut(s) 271
Alw26I GTCTC 1 cut(s) 139
Alw44I GTGCAC 1 cut(s) 267
ApaLI GTGCAC 1 cut(s) 267
ApoI RAATTY 2 cut(s) 19, 217
Asp700I GAANNNNTTC 1 cut(s) 23
Asp718I GGTACC 1 cut(s) 331
AsuHPI GGTGA 2 cut(s) 19, 213
BaeGI GKGCMC 1 cut(s) 271
BanI GGYRCC 1 cut(s) 331
Bbv12I GWGCWC 1 cut(s) 271
BccI CCATC 2 cut(s) 7, 114
BciT130I CCWGG 1 cut(s) 196
BcoDI GTCTC 1 cut(s) 139
BfaI CTAG 1 cut(s) 364
Bme1390I CCNGG 1 cut(s) 196
BmiI GGNNCC 1 cut(s) 333
BmrFI CCNGG 1 cut(s) 196
BmsI GCATC 1 cut(s) 100
BsaAI YACGTR 1 cut(s) 321
BsaJI CCNNGG 4 cut(s) 115, 172, 195, 237
Bsc4I CCNNNNNNNGG 3 cut(s) 120, 263, 278
BseBI CCWGG 1 cut(s) 196
BseDI CCNNGG 4 cut(s) 115, 172, 195, 237
BseGI GGATG 4 cut(s) 125, 182, 207, 232
BseLI CCNNNNNNNGG 3 cut(s) 120, 263, 278
BseSI GKGCMC 1 cut(s) 271
Bsh1236I CGCG 1 cut(s) 239
BshNI GGYRCC 1 cut(s) 331
BsiHKAI GWGCWC 1 cut(s) 271
BslI CCNNNNNNNGG 3 cut(s) 120, 263, 278
BsmAI GTCTC 1 cut(s) 139
BsmBI CGTCTC 1 cut(s) 139
Bsp1286I GDGCHC 1 cut(s) 271
BspACI CCGC 3 cut(s) 99, 237, 239
BspFNI CGCG 1 cut(s) 239
BspLI GGNNCC 1 cut(s) 333
BspT107I GGYRCC 1 cut(s) 331
BsrBI CCGCTC 1 cut(s) 99
BssECI CCNNGG 4 cut(s) 115, 172, 195, 237
Bst2UI CCWGG 1 cut(s) 196
Bst4CI ACNGT 2 cut(s) 331, 358
BstBAI YACGTR 1 cut(s) 321
BstDSI CCRYGG 2 cut(s) 172, 237
BstF5I GGATG 4 cut(s) 125, 182, 207, 232
BstFNI CGCG 1 cut(s) 239
BstMAI GTCTC 1 cut(s) 139
BstNI CCWGG 1 cut(s) 196
BstSCI CCNGG 1 cut(s) 194
BstSLI GKGCMC 1 cut(s) 271
BstUI CGCG 1 cut(s) 239
BstXI CCANNNNNNTGG 2 cut(s) 179, 351
BtgI CCRYGG 2 cut(s) 172, 237
BtsCI GGATG 4 cut(s) 125, 182, 207, 232
Cfr42I CCGCGG 1 cut(s) 240
Csp6I GTAC 2 cut(s) 322, 332
CviJI RGCY 1 cut(s) 247
CviKI_1 RGCY 1 cut(s) 247
CviQI GTAC 2 cut(s) 322, 332
EcoRI GAATTC 1 cut(s) 19
EcoRII CCWGG 1 cut(s) 194
Esp3I CGTCTC 1 cut(s) 139
FaiI YATR 2 cut(s) 33, 159
FauI CCCGC 2 cut(s) 92, 244
FokI GGATG 4 cut(s) 132, 189, 214, 219
FspBI CTAG 1 cut(s) 364
HincII GTYRAC 1 cut(s) 361
HindII GTYRAC 1 cut(s) 361
HinfI GANTC 1 cut(s) 187
HpaI GTTAAC 1 cut(s) 361
HphI GGTGA 2 cut(s) 19, 213
Hpy166II GTNNAC 2 cut(s) 269, 361
Hpy188I TCNGA 1 cut(s) 119
Hpy8I GTNNAC 2 cut(s) 269, 361
HpyAV CCTTC 2 cut(s) 34, 135
HpyCH4III ACNGT 2 cut(s) 331, 358
HpyCH4IV ACGT 2 cut(s) 276, 320
HpyCH4V TGCA 2 cut(s) 35, 269
HpySE526I ACGT 2 cut(s) 276, 320
KpnI GGTACC 1 cut(s) 335
KspAI GTTAAC 1 cut(s) 361
KspI CCGCGG 1 cut(s) 240
LmnI GCTCC 2 cut(s) 96, 102
LpnPI CCDG 3 cut(s) 65, 181, 208
LweI GCATC 1 cut(s) 100
MaeI CTAG 1 cut(s) 364
MaeII ACGT 2 cut(s) 276, 320
MbiI CCGCTC 1 cut(s) 99
MboII GAAGA 2 cut(s) 147, 150
MhlI GDGCHC 1 cut(s) 271
MluCI AATT 3 cut(s) 19, 160, 217
MlyI GAGTC 1 cut(s) 196
MnlI CCTC 4 cut(s) 125, 125, 146, 198
MroXI GAANNNNTTC 1 cut(s) 23
MseI TTAA 1 cut(s) 360
MslI CAYNNNNRTG 1 cut(s) 177
MspA1I CMGCKG 1 cut(s) 239
MspR9I CCNGG 1 cut(s) 196
MvaI CCWGG 1 cut(s) 196
MvnI CGCG 1 cut(s) 239
NlaIV GGNNCC 1 cut(s) 333
OliI CACNNNNGTG 1 cut(s) 177
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PdmI GAANNNNTTC 1 cut(s) 23
PleI GAGTC 1 cut(s) 195
PpsI GAGTC 1 cut(s) 195
Ppu21I YACGTR 1 cut(s) 321
PsiI TTATAA 1 cut(s) 159
Psp6I CCWGG 1 cut(s) 194
PspGI CCWGG 1 cut(s) 194
PspN4I GGNNCC 1 cut(s) 333
RsaI GTAC 2 cut(s) 323, 333
RsaNI GTAC 2 cut(s) 322, 332
RseI CAYNNNNRTG 1 cut(s) 177
SacII CCGCGG 1 cut(s) 240
SaqAI TTAA 1 cut(s) 360
SchI GAGTC 1 cut(s) 196
ScrFI CCNGG 1 cut(s) 196
SduI GDGCHC 1 cut(s) 271
SetI ASST 7 cut(s) 157, 209, 249, 268, 279, 323, 337
SfaNI GCATC 1 cut(s) 100
Sfr303I CCGCGG 1 cut(s) 240
SgrBI CCGCGG 1 cut(s) 240
SmiMI CAYNNNNRTG 1 cut(s) 177
Sse9I AATT 3 cut(s) 19, 160, 217
SsiI CCGC 3 cut(s) 99, 237, 239
SspMI CTAG 1 cut(s) 364
StyD4I CCNGG 1 cut(s) 194
TaaI ACNGT 2 cut(s) 331, 358
TaiI ACGT 2 cut(s) 279, 323
TasI AATT 3 cut(s) 19, 160, 217
Tru1I TTAA 1 cut(s) 360
Tru9I TTAA 1 cut(s) 360
TspGWI ACGGA 9 cut(s) 64, 69, 99, 104, 109, 163, 189, 297, 298
VneI GTGCAC 1 cut(s) 267
XapI RAATTY 2 cut(s) 19, 217
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 1 cut(s) 364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.