pycom11g19210

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
21503171 .. 21503707
537 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g19210.1

Sequence Viewer

Length: 432 bp
ATGGGTTTTGAGTTTGCAATACTAGGCAGAAGAGTATCGTTTGGTATGCAGACGGGACGGGACGGAACGGAATGGGACGGGACGGGACGGAACGGAACGGAACGGAGCGGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGAAGAGATTATAATTTTGTGCTCCACGGATGTGGAACGAGTCGTTCCAGGGGGATGAGGTGGAACGAAAATTCACCTAAAACTCGTCCCGTGGAACAGCTCGTTCCACCCGTTTTAGACGCACCAAACGTGGGACGGAACGCCTTGTCCCACTCTGTTCCGTTCCGTCCCACATACCAAACGGTACCTTATTGTCATAATACTAATATGGATACAAATACGAATTACCACGGAATTCTTTGTTGGCTCCTCATTGCCAAATATATTCAGTTGTGA

Protein Analysis

144

Amino Acids

16.27

Weight (kDa)

10.27

Isoelectric Point (pI)

66.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 168
Acc65I GGTACC 1 cut(s) 340
AccB1I GGYRCC 1 cut(s) 340
AccBSI CCGCTC 1 cut(s) 108
AciI CCGC 1 cut(s) 108
AcsI RAATTY 2 cut(s) 226, 390
AfaI GTAC 1 cut(s) 342
AfiI CCNNNNNNNGG 2 cut(s) 129, 287
AjnI CCWGG 1 cut(s) 203
AjuI GAANNNNNNNTTGG 2 cut(s) 382, 414
AleI CACNNNNGTG 1 cut(s) 186
AloI GAACNNNNNNTCC 2 cut(s) 287, 319
AluBI AGCT 1 cut(s) 256
AluI AGCT 1 cut(s) 256
Alw21I GWGCWC 1 cut(s) 180
Alw26I GTCTC 1 cut(s) 148
ApoI RAATTY 2 cut(s) 226, 390
Asp718I GGTACC 1 cut(s) 340
AsuHPI GGTGA 1 cut(s) 222
BanI GGYRCC 1 cut(s) 340
Bbv12I GWGCWC 1 cut(s) 180
BccI CCATC 1 cut(s) 123
BciT130I CCWGG 1 cut(s) 205
BciVI GTATCC 1 cut(s) 361
BcoDI GTCTC 1 cut(s) 148
BfaI CTAG 1 cut(s) 23
BfuI GTATCC 1 cut(s) 361
Bme1390I CCNGG 1 cut(s) 205
BmiI GGNNCC 2 cut(s) 342, 404
BmrFI CCNGG 1 cut(s) 205
BmsI GCATC 1 cut(s) 109
BsaJI CCNNGG 5 cut(s) 124, 181, 204, 246, 385
Bsc4I CCNNNNNNNGG 2 cut(s) 129, 287
Bse3DI GCAATG 1 cut(s) 408
BseBI CCWGG 1 cut(s) 205
BseDI CCNNGG 5 cut(s) 124, 181, 204, 246, 385
BseGI GGATG 3 cut(s) 134, 191, 216
BseLI CCNNNNNNNGG 2 cut(s) 129, 287
BseMI GCAATG 1 cut(s) 408
BseRI GAGGAG 1 cut(s) 395
BshNI GGYRCC 1 cut(s) 340
BsiHKAI GWGCWC 1 cut(s) 180
BslFI GGGAC 9 cut(s) 69, 74, 89, 94, 99, 228, 289, 303, 309
BslI CCNNNNNNNGG 2 cut(s) 129, 287
BsmAI GTCTC 1 cut(s) 148
BsmBI CGTCTC 1 cut(s) 148
BsmFI GGGAC 9 cut(s) 69, 74, 89, 94, 99, 228, 289, 303, 309
Bsp1286I GDGCHC 1 cut(s) 180
BspACI CCGC 1 cut(s) 108
BspLI GGNNCC 2 cut(s) 342, 404
BspT107I GGYRCC 1 cut(s) 340
BsrBI CCGCTC 1 cut(s) 108
BsrDI GCAATG 1 cut(s) 408
BssECI CCNNGG 5 cut(s) 124, 181, 204, 246, 385
Bst2UI CCWGG 1 cut(s) 205
Bst4CI ACNGT 1 cut(s) 340
Bst6I CTCTTC 2 cut(s) 25, 154
BstDSI CCRYGG 3 cut(s) 181, 246, 385
BstF5I GGATG 3 cut(s) 134, 191, 216
BstMAI GTCTC 1 cut(s) 148
BstNI CCWGG 1 cut(s) 205
BstSCI CCNGG 1 cut(s) 203
BstXI CCANNNNNNTGG 1 cut(s) 188
BsuI GTATCC 1 cut(s) 361
BtgI CCRYGG 3 cut(s) 181, 246, 385
BtsCI GGATG 3 cut(s) 134, 191, 216
CseI GACGC 1 cut(s) 284
Csp6I GTAC 1 cut(s) 341
CviJI RGCY 2 cut(s) 256, 403
CviKI_1 RGCY 2 cut(s) 256, 403
CviQI GTAC 1 cut(s) 341
Eam1104I CTCTTC 2 cut(s) 25, 154
EarI CTCTTC 2 cut(s) 25, 154
EcoRI GAATTC 1 cut(s) 390
EcoRII CCWGG 1 cut(s) 203
Esp3I CGTCTC 1 cut(s) 148
FaiI YATR 6 cut(s) 47, 168, 331, 354, 365, 420
FaqI GGGAC 9 cut(s) 69, 74, 89, 94, 99, 228, 289, 303, 309
FauI CCCGC 1 cut(s) 101
FokI GGATG 3 cut(s) 141, 198, 223
FspBI CTAG 1 cut(s) 23
HgaI GACGC 1 cut(s) 284
HinfI GANTC 1 cut(s) 196
HphI GGTGA 1 cut(s) 222
Hpy188I TCNGA 1 cut(s) 128
HpyAV CCTTC 1 cut(s) 144
HpyCH4III ACNGT 1 cut(s) 340
HpyCH4IV ACGT 1 cut(s) 285
HpyCH4V TGCA 2 cut(s) 17, 49
HpySE526I ACGT 1 cut(s) 285
KpnI GGTACC 1 cut(s) 344
LmnI GCTCC 4 cut(s) 105, 111, 183, 408
LpnPI CCDG 2 cut(s) 190, 217
LweI GCATC 1 cut(s) 109
MaeI CTAG 1 cut(s) 23
MaeII ACGT 1 cut(s) 285
MbiI CCGCTC 1 cut(s) 108
MboII GAAGA 4 cut(s) 42, 156, 159, 171
MhlI GDGCHC 1 cut(s) 180
MluCI AATT 4 cut(s) 169, 226, 379, 390
MlyI GAGTC 1 cut(s) 205
MnlI CCTC 4 cut(s) 134, 134, 207, 416
MslI CAYNNNNRTG 1 cut(s) 186
MspR9I CCNGG 1 cut(s) 205
MvaI CCWGG 1 cut(s) 205
NlaIV GGNNCC 2 cut(s) 342, 404
OliI CACNNNNGTG 1 cut(s) 186
PcsI WCGNNNNNNNCGW 2 cut(s) 264, 282
PleI GAGTC 1 cut(s) 204
PpsI GAGTC 1 cut(s) 204
PsiI TTATAA 1 cut(s) 168
Psp6I CCWGG 1 cut(s) 203
PspGI CCWGG 1 cut(s) 203
PspN4I GGNNCC 2 cut(s) 342, 404
RsaI GTAC 1 cut(s) 342
RsaNI GTAC 1 cut(s) 341
RseI CAYNNNNRTG 1 cut(s) 186
SchI GAGTC 1 cut(s) 205
ScrFI CCNGG 1 cut(s) 205
SduI GDGCHC 1 cut(s) 180
SetI ASST 5 cut(s) 218, 235, 258, 288, 346
SfaNI GCATC 1 cut(s) 109
SmiMI CAYNNNNRTG 1 cut(s) 186
Sse9I AATT 4 cut(s) 169, 226, 379, 390
SsiI CCGC 1 cut(s) 108
SspMI CTAG 1 cut(s) 23
StyD4I CCNGG 1 cut(s) 203
TaaI ACNGT 1 cut(s) 340
TaiI ACGT 1 cut(s) 288
TasI AATT 4 cut(s) 169, 226, 379, 390
XapI RAATTY 2 cut(s) 226, 390
XspI CTAG 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.