pycom02g24960

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
23025720 .. 23026196
477 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g24960.1

Sequence Viewer

Length: 417 bp
ATGGACATTCAAAAATTAATATATCCTAAAATTCCAAGTACACCCTCGTCCAAATGGTTGTTGTACTACTTTAACAGCGAACGAAGGCAACATATAGGTATCGTTTGGTATGCAGACGGGACGGCACGGAACGGAACGAGACGGGACGGGACGGGACAGGACGGAACGGAACGGAGCGAGATCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGATGTTATAATTTTGTGTTCCACGGATGTGGAACGAGTCGTTCCAGGGGGGTGAGGTGGAACGAAAATTCATCCAAAACTCGTCCCGTGGAACATCTCGTTCCACCCGTTTTAGGCGCACCAAACGTGGGACGGAACGCCTTGTCCCACTCTGTTCCGTCCCGTCCCACGTACCAAACAGTACCATAA

Protein Analysis

139

Amino Acids

15.75

Weight (kDa)

10.73

Isoelectric Point (pI)

82.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 237
AcsI RAATTY 2 cut(s) 30, 295
AfaI GTAC 4 cut(s) 40, 65, 401, 411
AfiI CCNNNNNNNGG 3 cut(s) 198, 341, 356
AgsI TTSAA 1 cut(s) 11
AjnI CCWGG 1 cut(s) 272
AleI CACNNNNGTG 1 cut(s) 255
AloI GAACNNNNNNTCC 2 cut(s) 356, 388
Alw26I GTCTC 2 cut(s) 133, 217
ApoI RAATTY 2 cut(s) 30, 295
AseI ATTAAT 1 cut(s) 17
AspLEI GCGC 1 cut(s) 347
AsuHPI GGTGA 1 cut(s) 292
BccI CCATC 1 cut(s) 192
BceAI ACGGC 1 cut(s) 138
BciT130I CCWGG 1 cut(s) 274
BcoDI GTCTC 2 cut(s) 133, 217
Bme1390I CCNGG 1 cut(s) 274
BmrFI CCNGG 1 cut(s) 274
BmsI GCATC 1 cut(s) 178
BsaAI YACGTR 1 cut(s) 399
BsaJI CCNNGG 4 cut(s) 193, 250, 273, 315
Bsc4I CCNNNNNNNGG 3 cut(s) 198, 341, 356
BseBI CCWGG 1 cut(s) 274
BseDI CCNNGG 4 cut(s) 193, 250, 273, 315
BseGI GGATG 3 cut(s) 203, 260, 299
BseLI CCNNNNNNNGG 3 cut(s) 198, 341, 356
BslFI GGGAC 9 cut(s) 133, 158, 163, 168, 297, 358, 372, 373, 378
BslI CCNNNNNNNGG 3 cut(s) 198, 341, 356
BsmAI GTCTC 2 cut(s) 133, 217
BsmBI CGTCTC 2 cut(s) 133, 217
BsmFI GGGAC 9 cut(s) 133, 158, 163, 168, 297, 358, 372, 373, 378
Bsp143I GATC 1 cut(s) 180
BssECI CCNNGG 4 cut(s) 193, 250, 273, 315
BssMI GATC 1 cut(s) 180
Bst2UI CCWGG 1 cut(s) 274
Bst4CI ACNGT 1 cut(s) 409
BstBAI YACGTR 1 cut(s) 399
BstDSI CCRYGG 2 cut(s) 250, 315
BstF5I GGATG 3 cut(s) 203, 260, 299
BstHHI GCGC 1 cut(s) 347
BstKTI GATC 1 cut(s) 183
BstMAI GTCTC 2 cut(s) 133, 217
BstMBI GATC 1 cut(s) 180
BstNI CCWGG 1 cut(s) 274
BstSCI CCNGG 1 cut(s) 272
BstXI CCANNNNNNTGG 1 cut(s) 257
BtgI CCRYGG 2 cut(s) 250, 315
BtsCI GGATG 3 cut(s) 203, 260, 299
CfoI GCGC 1 cut(s) 347
Csp6I GTAC 4 cut(s) 39, 64, 400, 410
CviQI GTAC 4 cut(s) 39, 64, 400, 410
DpnI GATC 1 cut(s) 182
DpnII GATC 1 cut(s) 180
EcoRII CCWGG 1 cut(s) 272
Esp3I CGTCTC 2 cut(s) 133, 217
FaiI YATR 6 cut(s) 22, 93, 95, 111, 237, 415
FaqI GGGAC 9 cut(s) 133, 158, 163, 168, 297, 358, 372, 373, 378
FokI GGATG 3 cut(s) 210, 267, 286
GlaI GCGC 1 cut(s) 346
HhaI GCGC 1 cut(s) 347
Hin6I GCGC 1 cut(s) 345
HinP1I GCGC 1 cut(s) 345
HinfI GANTC 1 cut(s) 265
HphI GGTGA 1 cut(s) 292
Hpy166II GTNNAC 1 cut(s) 41
Hpy188I TCNGA 1 cut(s) 197
Hpy8I GTNNAC 1 cut(s) 41
HpyAV CCTTC 2 cut(s) 78, 213
HpyCH4III ACNGT 1 cut(s) 409
HpyCH4IV ACGT 2 cut(s) 354, 398
HpyCH4V TGCA 1 cut(s) 113
HpySE526I ACGT 2 cut(s) 354, 398
HspAI GCGC 1 cut(s) 345
Kzo9I GATC 1 cut(s) 180
LmnI GCTCC 1 cut(s) 174
LpnPI CCDG 3 cut(s) 143, 259, 286
LweI GCATC 1 cut(s) 178
MaeII ACGT 2 cut(s) 354, 398
MalI GATC 1 cut(s) 182
MboI GATC 1 cut(s) 180
MboII GAAGA 2 cut(s) 225, 228
MluCI AATT 4 cut(s) 14, 30, 238, 295
MlyI GAGTC 1 cut(s) 274
MnlI CCTC 4 cut(s) 55, 203, 203, 276
MseI TTAA 2 cut(s) 17, 72
MslI CAYNNNNRTG 1 cut(s) 255
MspR9I CCNGG 1 cut(s) 274
MvaI CCWGG 1 cut(s) 274
NdeII GATC 1 cut(s) 180
OliI CACNNNNGTG 1 cut(s) 255
PcsI WCGNNNNNNNCGW 1 cut(s) 333
PleI GAGTC 1 cut(s) 273
PpsI GAGTC 1 cut(s) 273
Ppu21I YACGTR 1 cut(s) 399
PshBI ATTAAT 1 cut(s) 17
PsiI TTATAA 1 cut(s) 237
Psp6I CCWGG 1 cut(s) 272
PspGI CCWGG 1 cut(s) 272
RsaI GTAC 4 cut(s) 40, 65, 401, 411
RsaNI GTAC 4 cut(s) 39, 64, 400, 410
RseI CAYNNNNRTG 1 cut(s) 255
SaqAI TTAA 2 cut(s) 17, 72
Sau3AI GATC 1 cut(s) 180
SchI GAGTC 1 cut(s) 274
ScrFI CCNGG 1 cut(s) 274
SetI ASST 4 cut(s) 100, 287, 357, 401
SfaNI GCATC 1 cut(s) 178
SmiMI CAYNNNNRTG 1 cut(s) 255
Sse9I AATT 4 cut(s) 14, 30, 238, 295
StyD4I CCNGG 1 cut(s) 272
TaaI ACNGT 1 cut(s) 409
TaiI ACGT 2 cut(s) 357, 401
TasI AATT 4 cut(s) 14, 30, 238, 295
TatI WGTACW 2 cut(s) 38, 63
Tru1I TTAA 2 cut(s) 17, 72
Tru9I TTAA 2 cut(s) 17, 72
TspDTI ATGAA 1 cut(s) 288
TspGWI ACGGA 9 cut(s) 142, 147, 177, 182, 187, 241, 267, 375, 376
VspI ATTAAT 1 cut(s) 17
XapI RAATTY 2 cut(s) 30, 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.