pycom04g13360

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
16311628 .. 16312114
487 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g13360.1

Sequence Viewer

Length: 426 bp
ATGGAAAAAAGGAAGGCTTTATTACTTGAAGATTTCGCTTTGTATATCGTTTGGTATGCAGACGGGACGGAACGGAACGGAATGGGACGGGACGGGACCGAACAGGACAGAACGGAACGGAGCGGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAGAGGTTATAATTTTGTGTTCCACAGATGTGGAACGAGTCGTTCCAGAGGGGTGAGGTGGAACGAAAATTCACCCAAAACTCGTCCTGTGGAACAGCTCGTTCCACCCGTTTTAGGCGCACCAAACGTGGGACGGAACGCCTTGTCTCACTTTGTTCCGTCCCGTCTCACGTACCAAACGGTACCTAAGCTTGTTGTGATTTATTTCATATTATTGTTCATTTGTACTTTTATAAATACTTCATCACAGTAA

Protein Analysis

142

Amino Acids

16.22

Weight (kDa)

10.53

Isoelectric Point (pI)

75.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 183, 407
Acc65I GGTACC 1 cut(s) 355
AccB1I GGYRCC 1 cut(s) 355
AccBSI CCGCTC 1 cut(s) 123
AciI CCGC 1 cut(s) 123
AcsI RAATTY 1 cut(s) 241
AfaI GTAC 3 cut(s) 347, 357, 400
AfiI CCNNNNNNNGG 3 cut(s) 144, 287, 302
AgsI TTSAA 1 cut(s) 29
AleI CACNNNNGTG 1 cut(s) 201
AluBI AGCT 2 cut(s) 271, 364
AluI AGCT 2 cut(s) 271, 364
Alw26I GTCTC 3 cut(s) 163, 324, 344
ApoI RAATTY 1 cut(s) 241
Asp718I GGTACC 1 cut(s) 355
AspLEI GCGC 1 cut(s) 293
AspS9I GGNCC 1 cut(s) 96
AsuHPI GGTGA 2 cut(s) 237, 238
AvaII GGWCC 1 cut(s) 96
BanI GGYRCC 1 cut(s) 355
BccI CCATC 1 cut(s) 138
BcoDI GTCTC 3 cut(s) 163, 324, 344
Bme18I GGWCC 1 cut(s) 96
BmgT120I GGNCC 1 cut(s) 96
BmiI GGNNCC 2 cut(s) 97, 357
BmsI GCATC 1 cut(s) 124
Bpu10I CCTNAGC 1 cut(s) 360
BsaAI YACGTR 1 cut(s) 345
BsaJI CCNNGG 1 cut(s) 139
Bsc4I CCNNNNNNNGG 3 cut(s) 144, 287, 302
BseDI CCNNGG 1 cut(s) 139
BseGI GGATG 1 cut(s) 149
BseLI CCNNNNNNNGG 3 cut(s) 144, 287, 302
BshNI GGYRCC 1 cut(s) 355
BslFI GGGAC 6 cut(s) 79, 99, 104, 109, 318, 319
BslI CCNNNNNNNGG 3 cut(s) 144, 287, 302
BsmAI GTCTC 3 cut(s) 163, 324, 344
BsmBI CGTCTC 2 cut(s) 163, 344
BsmFI GGGAC 6 cut(s) 79, 99, 104, 109, 318, 319
BspACI CCGC 1 cut(s) 123
BspLI GGNNCC 2 cut(s) 97, 357
BspT107I GGYRCC 1 cut(s) 355
BsrBI CCGCTC 1 cut(s) 123
BssECI CCNNGG 1 cut(s) 139
Bst4CI ACNGT 2 cut(s) 355, 423
BstBAI YACGTR 1 cut(s) 345
BstDEI CTNAG 1 cut(s) 360
BstF5I GGATG 1 cut(s) 149
BstHHI GCGC 1 cut(s) 293
BstMAI GTCTC 3 cut(s) 163, 324, 344
BstXI CCANNNNNNTGG 1 cut(s) 203
BtsCI GGATG 1 cut(s) 149
CfoI GCGC 1 cut(s) 293
Cfr13I GGNCC 1 cut(s) 96
Csp6I GTAC 3 cut(s) 346, 356, 399
CviJI RGCY 3 cut(s) 17, 271, 364
CviKI_1 RGCY 3 cut(s) 17, 271, 364
CviQI GTAC 3 cut(s) 346, 356, 399
DdeI CTNAG 1 cut(s) 360
Eco47I GGWCC 1 cut(s) 96
Esp3I CGTCTC 2 cut(s) 163, 344
FaiI YATR 5 cut(s) 45, 57, 183, 383, 407
FalI AAGNNNNNCTT 1 cut(s) 33
FaqI GGGAC 6 cut(s) 79, 99, 104, 109, 318, 319
FauI CCCGC 1 cut(s) 116
FokI GGATG 1 cut(s) 156
GlaI GCGC 1 cut(s) 292
HhaI GCGC 1 cut(s) 293
Hin6I GCGC 1 cut(s) 291
HinP1I GCGC 1 cut(s) 291
HindIII AAGCTT 1 cut(s) 362
HinfI GANTC 1 cut(s) 211
HphI GGTGA 2 cut(s) 237, 238
Hpy188I TCNGA 1 cut(s) 143
Hpy188III TCNNGA 1 cut(s) 219
HpyAV CCTTC 2 cut(s) 7, 159
HpyCH4III ACNGT 2 cut(s) 355, 423
HpyCH4IV ACGT 2 cut(s) 300, 344
HpyCH4V TGCA 1 cut(s) 59
HpyF3I CTNAG 1 cut(s) 360
HpySE526I ACGT 2 cut(s) 300, 344
HspAI GCGC 1 cut(s) 291
KpnI GGTACC 1 cut(s) 359
LmnI GCTCC 2 cut(s) 120, 126
LpnPI CCDG 3 cut(s) 89, 232, 273
LweI GCATC 1 cut(s) 124
MaeII ACGT 2 cut(s) 300, 344
MbiI CCGCTC 1 cut(s) 123
MboII GAAGA 3 cut(s) 41, 171, 174
MluCI AATT 2 cut(s) 184, 241
MlyI GAGTC 1 cut(s) 220
MnlI CCTC 5 cut(s) 149, 149, 170, 215, 222
MslI CAYNNNNRTG 1 cut(s) 201
NlaIV GGNNCC 2 cut(s) 97, 357
OliI CACNNNNGTG 1 cut(s) 201
PcsI WCGNNNNNNNCGW 1 cut(s) 279
PleI GAGTC 1 cut(s) 219
PpsI GAGTC 1 cut(s) 219
Ppu21I YACGTR 1 cut(s) 345
PsiI TTATAA 2 cut(s) 183, 407
PspN4I GGNNCC 2 cut(s) 97, 357
PspPI GGNCC 1 cut(s) 96
RsaI GTAC 3 cut(s) 347, 357, 400
RsaNI GTAC 3 cut(s) 346, 356, 399
RseI CAYNNNNRTG 1 cut(s) 201
Sau96I GGNCC 1 cut(s) 96
SchI GAGTC 1 cut(s) 220
SetI ASST 7 cut(s) 181, 233, 273, 303, 347, 361, 366
SfaNI GCATC 1 cut(s) 124
SinI GGWCC 1 cut(s) 96
SmiMI CAYNNNNRTG 1 cut(s) 201
Sse9I AATT 2 cut(s) 184, 241
SsiI CCGC 1 cut(s) 123
TaaI ACNGT 2 cut(s) 355, 423
TaiI ACGT 2 cut(s) 303, 347
TaqII GACCGA 1 cut(s) 113
TasI AATT 2 cut(s) 184, 241
TatI WGTACW 1 cut(s) 398
TspDTI ATGAA 3 cut(s) 370, 382, 405
TspGWI ACGGA 8 cut(s) 83, 88, 93, 128, 133, 187, 321, 322
VpaK11BI GGWCC 1 cut(s) 96
XapI RAATTY 1 cut(s) 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.