pycom05g21810

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
24374541 .. 24374867
327 bp
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UTR
Exon/CDS
Intron
pycom05g21810.1

Sequence Viewer

Length: 327 bp
ATGGGACGGGACGGGACGGGACAGGACAGAACGGAACGGAGCTGGAGCAAAGATGCCCTCGGATGGAAAAAAGGAGGCGGAAGAAGAAAGAGACGGAGAGGTTATAATTTTGTGTTCCACGGATATGGAACGAGTCGTTCCAAAGGGGTGAGGTGGAAGGAAAATTCACCCAAAACTCGTCCCGTGGAACAGCTCGTTCCACCCGTTTTAGGCGCACCAAACGTGGGACGGAATGCCTTATCCCACTCTGTTCCGTCCCGTCCCACGTACCAAACGGTACCTTTGGGAACTCACTGGCTTCGGATTCCATCGGAACTCCGAAGTTAA

Protein Analysis

109

Amino Acids

12.19

Weight (kDa)

11.6

Isoelectric Point (pI)

76.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 105
Acc65I GGTACC 1 cut(s) 277
AccB1I GGYRCC 1 cut(s) 277
AciI CCGC 1 cut(s) 78
AcsI RAATTY 1 cut(s) 163
AfaI GTAC 2 cut(s) 269, 279
AfiI CCNNNNNNNGG 3 cut(s) 63, 209, 224
AluBI AGCT 2 cut(s) 42, 193
AluI AGCT 2 cut(s) 42, 193
Alw26I GTCTC 1 cut(s) 85
ApoI RAATTY 1 cut(s) 163
Asp718I GGTACC 1 cut(s) 277
AspLEI GCGC 1 cut(s) 215
AsuHPI GGTGA 2 cut(s) 159, 160
BanI GGYRCC 1 cut(s) 277
BccI CCATC 2 cut(s) 57, 316
BcoDI GTCTC 1 cut(s) 85
BmiI GGNNCC 1 cut(s) 279
BmsI GCATC 1 cut(s) 43
BpmI CTGGAG 1 cut(s) 64
BsaAI YACGTR 1 cut(s) 267
BsaJI CCNNGG 3 cut(s) 58, 118, 183
Bsc4I CCNNNNNNNGG 3 cut(s) 63, 209, 224
Bse1I ACTGG 1 cut(s) 299
BseDI CCNNGG 3 cut(s) 58, 118, 183
BseGI GGATG 1 cut(s) 68
BseLI CCNNNNNNNGG 3 cut(s) 63, 209, 224
BseNI ACTGG 1 cut(s) 299
BshNI GGYRCC 1 cut(s) 277
BslFI GGGAC 8 cut(s) 18, 23, 28, 33, 165, 240, 241, 246
BslI CCNNNNNNNGG 3 cut(s) 63, 209, 224
BsmAI GTCTC 1 cut(s) 85
BsmBI CGTCTC 1 cut(s) 85
BsmFI GGGAC 8 cut(s) 18, 23, 28, 33, 165, 240, 241, 246
BsmI GAATGC 1 cut(s) 238
BspACI CCGC 1 cut(s) 78
BspLI GGNNCC 1 cut(s) 279
BspT107I GGYRCC 1 cut(s) 277
BsrI ACTGG 1 cut(s) 299
BssECI CCNNGG 3 cut(s) 58, 118, 183
Bst4CI ACNGT 1 cut(s) 277
BstBAI YACGTR 1 cut(s) 267
BstDSI CCRYGG 2 cut(s) 118, 183
BstF5I GGATG 1 cut(s) 68
BstHHI GCGC 1 cut(s) 215
BstMAI GTCTC 1 cut(s) 85
BstXI CCANNNNNNTGG 1 cut(s) 125
BtgI CCRYGG 2 cut(s) 118, 183
BtsCI GGATG 1 cut(s) 68
BtsIMutI CAGTG 1 cut(s) 292
CfoI GCGC 1 cut(s) 215
Csp6I GTAC 2 cut(s) 268, 278
CviJI RGCY 3 cut(s) 42, 193, 298
CviKI_1 RGCY 3 cut(s) 42, 193, 298
CviQI GTAC 2 cut(s) 268, 278
EciI GGCGGA 1 cut(s) 93
Esp3I CGTCTC 1 cut(s) 85
FaiI YATR 2 cut(s) 105, 126
FaqI GGGAC 8 cut(s) 18, 23, 28, 33, 165, 240, 241, 246
FokI GGATG 1 cut(s) 75
GlaI GCGC 1 cut(s) 214
GsuI CTGGAG 1 cut(s) 64
HhaI GCGC 1 cut(s) 215
Hin6I GCGC 1 cut(s) 213
HinP1I GCGC 1 cut(s) 213
HinfI GANTC 2 cut(s) 133, 304
HphI GGTGA 2 cut(s) 159, 160
Hpy188I TCNGA 4 cut(s) 62, 303, 313, 320
HpyAV CCTTC 1 cut(s) 151
HpyCH4III ACNGT 1 cut(s) 277
HpyCH4IV ACGT 2 cut(s) 222, 266
HpySE526I ACGT 2 cut(s) 222, 266
HspAI GCGC 1 cut(s) 213
KpnI GGTACC 1 cut(s) 281
LmnI GCTCC 2 cut(s) 39, 45
LpnPI CCDG 3 cut(s) 8, 28, 280
LweI GCATC 1 cut(s) 43
MaeII ACGT 2 cut(s) 222, 266
MboII GAAGA 2 cut(s) 93, 96
MluCI AATT 2 cut(s) 106, 163
MlyI GAGTC 1 cut(s) 142
MnlI CCTC 4 cut(s) 68, 68, 92, 144
MseI TTAA 1 cut(s) 325
MslI CAYNNNNRTG 1 cut(s) 123
Mva1269I GAATGC 1 cut(s) 238
NlaIV GGNNCC 1 cut(s) 279
PcsI WCGNNNNNNNCGW 1 cut(s) 201
PctI GAATGC 1 cut(s) 238
PfeI GAWTC 1 cut(s) 304
PleI GAGTC 1 cut(s) 141
PpsI GAGTC 1 cut(s) 141
Ppu21I YACGTR 1 cut(s) 267
PsiI TTATAA 1 cut(s) 105
PspN4I GGNNCC 1 cut(s) 279
RsaI GTAC 2 cut(s) 269, 279
RsaNI GTAC 2 cut(s) 268, 278
RseI CAYNNNNRTG 1 cut(s) 123
SaqAI TTAA 1 cut(s) 325
SchI GAGTC 1 cut(s) 142
SetI ASST 7 cut(s) 44, 103, 155, 195, 225, 269, 283
SfaNI GCATC 1 cut(s) 43
SmiMI CAYNNNNRTG 1 cut(s) 123
Sse9I AATT 2 cut(s) 106, 163
SsiI CCGC 1 cut(s) 78
TaaI ACNGT 1 cut(s) 277
TaiI ACGT 2 cut(s) 225, 269
TasI AATT 2 cut(s) 106, 163
TfiI GAWTC 1 cut(s) 304
Tru1I TTAA 1 cut(s) 325
Tru9I TTAA 1 cut(s) 325
TscAI CASTG 1 cut(s) 299
TspGWI ACGGA 6 cut(s) 47, 52, 109, 135, 243, 244
TspRI CASTG 1 cut(s) 299
XapI RAATTY 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.