pycom14g13790

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0000602
Physical Location & Seq
Reverse (-)
16633004 .. 16638685
5682 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1638 bp
ATGCTCGATAAGATTAGGAATCTCGACCCTGCCATCCTCGATGTGATTAGGAACTTCGACCCTGCTTTCTCTTCGGAATTTTCTAAAAGCGTCAACGGTCCTCTAAATCCGCCGTCTGTTCCGTTACCTGCACCATCCGATCTCGATTCTAAATTCCTTGATTGGATTCGGAAACTCCACCCCGCCGTGCTTGATGAGCTTCTTTCTGACCCCGCCTTCCTCGATGAGATTCGGAACTTCGATCCTTCCATCGTTAATGAAATTCGGAAATTGAGTTTGAAGGGAAAGGAGGAAAAAGAAGAAGAAGAGAAGAGGAGAGAAAGTGAAAAGAAAATTGAGAAGGAGAGAGAGAGGGAAAGCAGCGGTGGCCGCGGAGGGAATGAGAACGGCGGTGTGGTGGATAAGAAGGTTGTTGAGGAGAGTAGCAGAAGGAATCAGTACCCATTGAGGCCCGAAGCTAAAGACTGTCCGTACTATCTGAAGACTGGCAACTGTAAGTTCGGATCGAATTGCAAGTTTAATCACCCTCGGATAAGGAAAAACAAGCAGGTGTCTAAAGACAAGGCTAAGAAGAGAGAAGAATTGGAAAAGGAGCAAGACCAGACCGAAAGCAAGTACTACATCAGCCCAGGACGACATATAGGGGTACCTTCTGTAGCTCCAGCTCTGGAACTTAACTTTTTGGGCCTGCCAATTCGTCCGGGGGAGAAAGATTGTCCCTACTATATGCGAACTGGCACCTGCAAGTATGAAACAAACTGCAAGTTTAACCACCCTGATCCTACAGCTGCCGGAGAATCTCGCCCACAATCCAGTAATGGTAGGCCTGCATCATTACAAGGTCTGCCAAAATCACAAGGGATAAATTCCGAAACTACAGAATGGAATGGTTATCAGGCTCCAGCATATCTACCACATAGAAGCAAGCCTGCACCTCCACCTCCGCCATATGTTATGAACAACTCAGTGACCGAAAGACAATATGCACAGCAGAAGCAAGCTGAAGAATTTCCACAACGACCTGGGCAACCTGTTTGCTTTTATTTCGCTCAAACGGGGGACTGTATTAATAAATCTAATTGCCAATATCACCATCCAAAAAATCATACTCCAGCGACCCCCTCATGTACACTCAATGACAGGGGCCTCCCTTTAAGACCTGGTCAGAACATTTGCACACAGTACAGCCGCTGCGGCCTTTGCAGTTCCGGGCCAACCTGTAGATTTGACCATCCGTCATTATCAGGCGCCAAACGAGCCCTCGGACTGGGGGAGTGGGATGATGGGAATGATACAAGATACAGCCACAGCAGAGAGAAACCTTCTGTAGCTCCAGTTCTTGAGCTTAACTTTCTGGGCCTGCCAATTCGACCGGGTGAGAGGGAGTGTCCCTACCATATGCGAAATGGCTCCTGCAAGTATGCATCGAACTGCAGGTTTAACCACCCTGATCCTACAGCCACAGGAGGATCTCATCCCCCATCTGGATATGGTAATGGTGGTCCTGCATCGTTACAAGGTGCATCACAATCAACAGTGGCACCGTGGTCTGCACCAAGGCCTTTGAATGAGGCTCCGGTTTACTCAACATTGATGATTCCACCACCTCATGTGGTTTCTTCTCAAAATTCAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH zf-CCCH_2

Protein Analysis

546

Amino Acids

60.65

Weight (kDa)

8.6

Isoelectric Point (pI)

58.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 154 - 177 1.1e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH_4 PF18044 156 - 176 8.9e-06 CCCH-type zinc finger
zf-CCCH PF00642 235 - 259 3.3e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 458 - 483 2.1e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48195 AT3G48440 AT5G63260 AT5G63260
fragaria_vesca FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100
malus_domestica MD06G1158800.v1.1 MD06G1159000.v1.1 MD06G1159200.v1.1 MD14G1165100.v1.1 MD14G1165300.v1.1 MD14G1165400.v1.1 MD14G1165500.v1.1
prunus_persica Prupe.5G158300_v2.0.a1 Prupe.5G158300_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158600_v2.0.a1 Prupe.5G158700_v2.0.a1 Prupe.5G158800_v2.0.a1 Prupe.5G158900_v2.0.a1 Prupe.5G159000_v2.0.a1 Prupe.5G159100_v2.0.a1 Prupe.5G159100_v2.0.a1
pyrus_communis pycom02g00910 pycom06g14200 pycom14g13760 pycom14g13790 pycom14g13800
rosa_chinensis RchiOBHm_Chr5g0019351 RchiOBHm_Chr5g0022771 RchiOBHm_Chr7g0191441 RchiOBHm_Chr7g0191531
rosa_laevigata RLG00000004449 RLG00000032440
rosa_multiflora Rmu_sc0001809.1_g000062 Rmu_sc0005292.1_g000027
rosa_roxburghii Rroxscaffold_1G00074260 Rroxscaffold_6G00390280 Rroxscaffold_7G00168660
rosa_rugosa Rorug05G0049600 Rorug05G0049700 Rorug05G0049800 Rorug06G0510400
rosa_samantha Rh5CG151400 Rh5DG140300 Rh7AG118400 Rh7BG120400 Rh7CG123200 Rh7DG121300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 538, 749
Acc36I ACCTGC 4 cut(s) 136, 538, 749, 1425
Acc65I GGTACC 1 cut(s) 646
AccB1I GGYRCC 4 cut(s) 646, 737, 1247, 1540
AccII CGCG 1 cut(s) 372
AclWI GGATC 5 cut(s) 236, 511, 773, 1445, 1477
AcoI YGGCCR 1 cut(s) 367
AcsI RAATTY 6 cut(s) 77, 152, 261, 865, 1007, 1627
AcuI CTGAAG 2 cut(s) 500, 1023
AcyI GRCGYC 1 cut(s) 1248
AfaI GTAC 6 cut(s) 440, 473, 617, 648, 1129, 1184
AfiI CCNNNNNNNGG 2 cut(s) 1267, 1484
AgsI TTSAA 2 cut(s) 280, 1567
AhdI GACNNNNNGTC 1 cut(s) 1234
AjnI CCWGG 3 cut(s) 628, 1021, 1159
AluBI AGCT 8 cut(s) 199, 458, 659, 665, 788, 1001, 1331, 1345
AluI AGCT 8 cut(s) 199, 458, 659, 665, 788, 1001, 1331, 1345
AlwI GGATC 5 cut(s) 236, 511, 773, 1445, 1477
AlwNI CAGNNNCTG 1 cut(s) 1191
AoxI GGCC 9 cut(s) 367, 449, 685, 824, 1144, 1195, 1211, 1357, 1559
ApeKI GCWGC 3 cut(s) 360, 788, 1191
ApoI RAATTY 6 cut(s) 77, 152, 261, 865, 1007, 1627
AseI ATTAAT 1 cut(s) 1068
Asp700I GAANNNNTTC 1 cut(s) 1008
Asp718I GGTACC 1 cut(s) 646
AspLEI GCGC 1 cut(s) 1250
AspS9I GGNCC 7 cut(s) 98, 450, 685, 1144, 1211, 1357, 1502
AsuC2I CCSGG 3 cut(s) 702, 1210, 1374
AsuHPI GGTGA 3 cut(s) 515, 1082, 1388
AvaII GGWCC 2 cut(s) 98, 1502
BanI GGYRCC 4 cut(s) 646, 737, 1247, 1540
BanII GRGCYC 1 cut(s) 1261
BbsI GAAGAC 1 cut(s) 488
BbvI GCAGC 3 cut(s) 372, 775, 1178
BccI CCATC 7 cut(s) 41, 142, 257, 1101, 1239, 1277, 1489
BceAI ACGGC 3 cut(s) 97, 170, 403
BciT130I CCWGG 3 cut(s) 630, 1023, 1161
BcnI CCSGG 3 cut(s) 702, 1210, 1374
BfmI CTRYAG 7 cut(s) 654, 783, 876, 1219, 1326, 1432, 1455
BfoI RGCGCY 1 cut(s) 1251
BfuAI ACCTGC 4 cut(s) 136, 538, 749, 1425
BglI GCCNNNNNGGC 1 cut(s) 1194
BisI GCNGC 6 cut(s) 361, 370, 789, 1189, 1192, 1195
BlsI GCNGC 6 cut(s) 362, 371, 790, 1190, 1193, 1196
BmcAI AGTACT 1 cut(s) 617
Bme1390I CCNGG 6 cut(s) 630, 702, 1023, 1161, 1210, 1374
Bme18I GGWCC 2 cut(s) 98, 1502
BmeRI GACNNNNNGTC 1 cut(s) 1234
BmgT120I GGNCC 7 cut(s) 98, 450, 685, 1144, 1211, 1357, 1502
BmiI GGNNCC 8 cut(s) 648, 739, 900, 1145, 1249, 1411, 1542, 1575
BmrFI CCNGG 6 cut(s) 630, 702, 1023, 1161, 1210, 1374
BmrI ACTGGG 1 cut(s) 1277
BmsI GCATC 4 cut(s) 839, 1433, 1517, 1532
BmuI ACTGGG 1 cut(s) 1277
BpiI GAAGAC 1 cut(s) 488
BpmI CTGGAG 4 cut(s) 645, 885, 1095, 1317
BpuEI CTTGAG 1 cut(s) 1361
BpuMI CCSGG 3 cut(s) 702, 1210, 1374
BsaHI GRCGYC 1 cut(s) 1248
BsaJI CCNNGG 8 cut(s) 370, 527, 628, 701, 1022, 1261, 1544, 1556
BsaWI WCCGGW 1 cut(s) 1576
BsaXI ACNNNNNCTCC 2 cut(s) 307, 337
Bsc4I CCNNNNNNNGG 2 cut(s) 1267, 1484
Bse1I ACTGG 5 cut(s) 490, 739, 813, 1272, 1334
BseBI CCWGG 3 cut(s) 630, 1023, 1161
BseDI CCNNGG 8 cut(s) 370, 527, 628, 701, 1022, 1261, 1544, 1556
BseGI GGATG 6 cut(s) 33, 134, 1093, 1231, 1285, 1474
BseLI CCNNNNNNNGG 2 cut(s) 1267, 1484
BseMII CTCAG 1 cut(s) 978
BseNI ACTGG 5 cut(s) 490, 739, 813, 1272, 1334
BseRI GAGGAG 2 cut(s) 328, 431
BseXI GCAGC 3 cut(s) 372, 775, 1178
BsgI GTGCAG 3 cut(s) 114, 915, 1536
Bsh1236I CGCG 1 cut(s) 372
Bsh1285I CGRYCG 1 cut(s) 1373
BshFI GGCC 9 cut(s) 369, 451, 687, 826, 1146, 1197, 1213, 1359, 1561
BshNI GGYRCC 4 cut(s) 646, 737, 1247, 1540
BsiEI CGRYCG 1 cut(s) 1373
BsiSI CCGG 5 cut(s) 701, 792, 1209, 1373, 1577
BslFI GGGAC 3 cut(s) 702, 1073, 1374
BslI CCNNNNNNNGG 2 cut(s) 1267, 1484
BsmFI GGGAC 3 cut(s) 702, 1073, 1374
BsnI GGCC 9 cut(s) 369, 451, 687, 826, 1146, 1197, 1213, 1359, 1561
Bsp1286I GDGCHC 1 cut(s) 1261
Bsp1407I TGTACA 1 cut(s) 1127
Bsp143I GATC 6 cut(s) 139, 241, 503, 778, 1450, 1469
BspANI GGCC 9 cut(s) 369, 451, 687, 826, 1146, 1197, 1213, 1359, 1561
BspCNI CTCAG 1 cut(s) 977
BspFNI CGCG 1 cut(s) 372
BspLI GGNNCC 8 cut(s) 648, 739, 900, 1145, 1249, 1411, 1542, 1575
BspMAI CTGCAG 1 cut(s) 1436
BspMI ACCTGC 4 cut(s) 136, 538, 749, 1425
BspPI GGATC 5 cut(s) 236, 511, 773, 1445, 1477
BspT107I GGYRCC 4 cut(s) 646, 737, 1247, 1540
BsrGI TGTACA 1 cut(s) 1127
BsrI ACTGG 5 cut(s) 490, 739, 813, 1272, 1334
BssECI CCNNGG 8 cut(s) 370, 527, 628, 701, 1022, 1261, 1544, 1556
BssMI GATC 6 cut(s) 139, 241, 503, 778, 1450, 1469
BssNI GRCGYC 1 cut(s) 1248
BssT1I CCWWGG 1 cut(s) 1556
Bst2UI CCWGG 3 cut(s) 630, 1023, 1161
Bst4CI ACNGT 7 cut(s) 98, 467, 494, 1064, 1182, 1537, 1545
Bst6I CTCTTC 4 cut(s) 76, 300, 305, 566
BstACI GRCGYC 1 cut(s) 1248
BstAUI TGTACA 1 cut(s) 1127
BstC8I GCNNGC 6 cut(s) 689, 828, 926, 930, 999, 1361
BstDEI CTNAG 2 cut(s) 567, 964
BstDSI CCRYGG 2 cut(s) 370, 1544
BstF5I GGATG 6 cut(s) 33, 134, 1093, 1231, 1285, 1474
BstFNI CGCG 1 cut(s) 372
BstH2I RGCGCY 1 cut(s) 1251
BstHHI GCGC 1 cut(s) 1250
BstKTI GATC 6 cut(s) 142, 244, 506, 781, 1453, 1472
BstMBI GATC 6 cut(s) 139, 241, 503, 778, 1450, 1469
BstMCI CGRYCG 1 cut(s) 1373
BstMWI GCNNNNNNNGC 6 cut(s) 196, 366, 369, 1194, 1200, 1256
BstNI CCWGG 3 cut(s) 630, 1023, 1161
BstSCI CCNGG 6 cut(s) 628, 700, 1021, 1159, 1208, 1372
BstSFI CTRYAG 7 cut(s) 654, 783, 876, 1219, 1326, 1432, 1455
BstUI CGCG 1 cut(s) 372
BstV1I GCAGC 3 cut(s) 372, 775, 1178
BstV2I GAAGAC 1 cut(s) 488
BstX2I RGATCY 1 cut(s) 1469
BstYI RGATCY 1 cut(s) 1469
BsuRI GGCC 9 cut(s) 369, 451, 687, 826, 1146, 1197, 1213, 1359, 1561
BtgI CCRYGG 2 cut(s) 370, 1544
BtsCI GGATG 6 cut(s) 33, 134, 1093, 1231, 1285, 1474
BtsIMutI CAGTG 2 cut(s) 972, 1542
BveI ACCTGC 4 cut(s) 136, 538, 749, 1425
Cac8I GCNNGC 6 cut(s) 689, 828, 926, 930, 999, 1361
CaiI CAGNNNCTG 1 cut(s) 1191
CfoI GCGC 1 cut(s) 1250
Cfr13I GGNCC 7 cut(s) 98, 450, 685, 1144, 1211, 1357, 1502
Cfr42I CCGCGG 1 cut(s) 373
CseI GACGC 1 cut(s) 79
CsiI ACCWGGT 1 cut(s) 1159
Csp6I GTAC 6 cut(s) 439, 472, 616, 647, 1128, 1183
CviAII CATG 2 cut(s) 1125, 1610
CviQI GTAC 6 cut(s) 439, 472, 616, 647, 1128, 1183
DdeI CTNAG 2 cut(s) 567, 964
DinI GGCGCC 1 cut(s) 1249
DpnI GATC 6 cut(s) 141, 243, 505, 780, 1452, 1471
DpnII GATC 6 cut(s) 139, 241, 503, 778, 1450, 1469
DriI GACNNNNNGTC 1 cut(s) 1234
EaeI YGGCCR 1 cut(s) 367
Eam1104I CTCTTC 4 cut(s) 76, 300, 305, 566
Eam1105I GACNNNNNGTC 1 cut(s) 1234
EarI CTCTTC 4 cut(s) 76, 300, 305, 566
EciI GGCGGA 2 cut(s) 99, 933
Eco130I CCWWGG 1 cut(s) 1556
Eco147I AGGCCT 2 cut(s) 826, 1561
Eco24I GRGCYC 1 cut(s) 1261
Eco47I GGWCC 2 cut(s) 98, 1502
Eco57I CTGAAG 2 cut(s) 500, 1023
EcoO109I RGGNCCY 1 cut(s) 1144
EcoRII CCWGG 3 cut(s) 628, 1021, 1159
EcoT14I CCWWGG 1 cut(s) 1556
EcoT22I ATGCAT 1 cut(s) 1426
EcoT38I GRGCYC 1 cut(s) 1261
EgeI GGCGCC 1 cut(s) 1249
EheI GGCGCC 1 cut(s) 1249
ErhI CCWWGG 1 cut(s) 1556
FaeI CATG 2 cut(s) 1128, 1613
FaqI GGGAC 3 cut(s) 702, 1073, 1374
FatI CATG 2 cut(s) 1124, 1609
FauI CCCGC 2 cut(s) 190, 220
FauNDI CATATG 2 cut(s) 949, 1398
Fnu4HI GCNGC 6 cut(s) 361, 370, 789, 1189, 1192, 1195
FokI GGATG 6 cut(s) 20, 121, 1080, 1218, 1292, 1461
FriOI GRGCYC 1 cut(s) 1261
Fsp4HI GCNGC 6 cut(s) 361, 370, 789, 1189, 1192, 1195
GlaI GCGC 1 cut(s) 1249
GluI GCNGC 6 cut(s) 361, 370, 789, 1189, 1192, 1195
GsuI CTGGAG 4 cut(s) 645, 885, 1095, 1317
HaeII RGCGCY 1 cut(s) 1251
HaeIII GGCC 9 cut(s) 369, 451, 687, 826, 1146, 1197, 1213, 1359, 1561
HapII CCGG 5 cut(s) 701, 792, 1209, 1373, 1577
HgaI GACGC 1 cut(s) 79
HhaI GCGC 1 cut(s) 1250
Hin1I GRCGYC 1 cut(s) 1248
Hin1II CATG 2 cut(s) 1128, 1613
Hin6I GCGC 1 cut(s) 1248
HinP1I GCGC 1 cut(s) 1248
HincII GTYRAC 1 cut(s) 94
HindII GTYRAC 1 cut(s) 94
HinfI GANTC 7 cut(s) 19, 146, 166, 229, 433, 797, 1597
HpaII CCGG 5 cut(s) 701, 792, 1209, 1373, 1577
HphI GGTGA 3 cut(s) 515, 1082, 1388
Hpy166II GTNNAC 3 cut(s) 94, 1130, 1582
Hpy188III TCNNGA 5 cut(s) 23, 143, 668, 1340, 1485
Hpy8I GTNNAC 3 cut(s) 94, 1130, 1582
HpyAV CCTTC 8 cut(s) 226, 255, 274, 334, 400, 423, 660, 1332
HpyCH4III ACNGT 7 cut(s) 98, 467, 494, 1064, 1182, 1537, 1545
HpyF10VI GCNNNNNNNGC 6 cut(s) 196, 366, 369, 1194, 1200, 1256
HpyF3I CTNAG 2 cut(s) 567, 964
Hsp92I GRCGYC 1 cut(s) 1248
Hsp92II CATG 2 cut(s) 1128, 1613
HspAI GCGC 1 cut(s) 1248
KasI GGCGCC 1 cut(s) 1247
KpnI GGTACC 1 cut(s) 650
KspI CCGCGG 1 cut(s) 373
Kzo9I GATC 6 cut(s) 139, 241, 503, 778, 1450, 1469
LmnI GCTCC 6 cut(s) 592, 664, 904, 1336, 1415, 1579
Lsp1109I GCAGC 3 cut(s) 372, 775, 1178
LweI GCATC 4 cut(s) 839, 1433, 1517, 1532
MabI ACCWGGT 1 cut(s) 1159
MaeIII GTNAC 3 cut(s) 123, 967, 1512
MalI GATC 6 cut(s) 141, 243, 505, 780, 1452, 1471
MboI GATC 6 cut(s) 139, 241, 503, 778, 1450, 1469
MflI RGATCY 1 cut(s) 1469
MhlI GDGCHC 1 cut(s) 1261
Mly113I GGCGCC 1 cut(s) 1248
Mph1103I ATGCAT 1 cut(s) 1426
MroXI GAANNNNTTC 1 cut(s) 1008
MseI TTAA 8 cut(s) 255, 519, 675, 768, 1068, 1154, 1347, 1440
MspA1I CMGCKG 4 cut(s) 363, 372, 788, 1191
MspI CCGG 5 cut(s) 701, 792, 1209, 1373, 1577
MspR9I CCNGG 6 cut(s) 630, 702, 1023, 1161, 1210, 1374
MvaI CCWGG 3 cut(s) 630, 1023, 1161
MvnI CGCG 1 cut(s) 372
MwoI GCNNNNNNNGC 6 cut(s) 196, 366, 369, 1194, 1200, 1256
NarI GGCGCC 1 cut(s) 1248
NciI CCSGG 3 cut(s) 702, 1210, 1374
NdeI CATATG 2 cut(s) 949, 1398
NdeII GATC 6 cut(s) 139, 241, 503, 778, 1450, 1469
NlaIII CATG 2 cut(s) 1128, 1613
NlaIV GGNNCC 8 cut(s) 648, 739, 900, 1145, 1249, 1411, 1542, 1575
NmuCI GTSAC 1 cut(s) 967
NsiI ATGCAT 1 cut(s) 1426
PaqCI CACCTGC 2 cut(s) 538, 749
PceI AGGCCT 2 cut(s) 826, 1561
PdmI GAANNNNTTC 1 cut(s) 1008
PfeI GAWTC 7 cut(s) 19, 146, 166, 229, 433, 797, 1597
PflFI GACNNNGTC 1 cut(s) 1161
PkrI GCNGC 6 cut(s) 362, 371, 790, 1190, 1193, 1196
PluTI GGCGCC 1 cut(s) 1251
PshBI ATTAAT 1 cut(s) 1068
Psp6I CCWGG 3 cut(s) 628, 1021, 1159
PspGI CCWGG 3 cut(s) 628, 1021, 1159
PspN4I GGNNCC 8 cut(s) 648, 739, 900, 1145, 1249, 1411, 1542, 1575
PspPI GGNCC 7 cut(s) 98, 450, 685, 1144, 1211, 1357, 1502
PsrI GAACNNNNNNTAC 2 cut(s) 1320, 1352
PstI CTGCAG 1 cut(s) 1436
PstNI CAGNNNCTG 1 cut(s) 1191
PsuI RGATCY 1 cut(s) 1469
PsyI GACNNNGTC 1 cut(s) 1161
PvuII CAGCTG 1 cut(s) 788
RsaI GTAC 6 cut(s) 440, 473, 617, 648, 1129, 1184
RsaNI GTAC 6 cut(s) 439, 472, 616, 647, 1128, 1183
SacII CCGCGG 1 cut(s) 373
SaqAI TTAA 8 cut(s) 255, 519, 675, 768, 1068, 1154, 1347, 1440
SatI GCNGC 6 cut(s) 361, 370, 789, 1189, 1192, 1195
Sau3AI GATC 6 cut(s) 139, 241, 503, 778, 1450, 1469
Sau96I GGNCC 7 cut(s) 98, 450, 685, 1144, 1211, 1357, 1502
ScaI AGTACT 1 cut(s) 617
ScrFI CCNGG 6 cut(s) 630, 702, 1023, 1161, 1210, 1374
SduI GDGCHC 1 cut(s) 1261
SexAI ACCWGGT 1 cut(s) 1159
SfaNI GCATC 4 cut(s) 839, 1433, 1517, 1532
SfcI CTRYAG 7 cut(s) 654, 783, 876, 1219, 1326, 1432, 1455
SfoI GGCGCC 1 cut(s) 1249
Sfr303I CCGCGG 1 cut(s) 373
SgrBI CCGCGG 1 cut(s) 373
SinI GGWCC 2 cut(s) 98, 1502
SmlI CTYRAG 1 cut(s) 1340
SmoI CTYRAG 1 cut(s) 1340
SseBI AGGCCT 2 cut(s) 826, 1561
SspDI GGCGCC 1 cut(s) 1247
StuI AGGCCT 2 cut(s) 826, 1561
StyD4I CCNGG 6 cut(s) 628, 700, 1021, 1159, 1208, 1372
StyI CCWWGG 1 cut(s) 1556
TaaI ACNGT 7 cut(s) 98, 467, 494, 1064, 1182, 1537, 1545
TaqII GACCGA 2 cut(s) 620, 986
TatI WGTACW 3 cut(s) 615, 1127, 1182
TauI GCSGC 3 cut(s) 372, 1191, 1197
TfiI GAWTC 7 cut(s) 19, 146, 166, 229, 433, 797, 1597
Tru1I TTAA 8 cut(s) 255, 519, 675, 768, 1068, 1154, 1347, 1440
Tru9I TTAA 8 cut(s) 255, 519, 675, 768, 1068, 1154, 1347, 1440
TscAI CASTG 2 cut(s) 972, 1542
TseFI GTSAC 1 cut(s) 967
TseI GCWGC 3 cut(s) 360, 788, 1191
Tsp45I GTSAC 1 cut(s) 967
TspDTI ATGAA 3 cut(s) 273, 765, 971
TspGWI ACGGA 3 cut(s) 111, 459, 1224
TspRI CASTG 2 cut(s) 972, 1542
Tth111I GACNNNGTC 1 cut(s) 1161
VpaK11BI GGWCC 2 cut(s) 98, 1502
VspI ATTAAT 1 cut(s) 1068
XapI RAATTY 6 cut(s) 77, 152, 261, 865, 1007, 1627
XcmI CCANNNNNNNNNTGG 1 cut(s) 1403
XmnI GAANNNNTTC 1 cut(s) 1008
ZrmI AGTACT 1 cut(s) 617
Zsp2I ATGCAT 1 cut(s) 1426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.