pycom17g04460

Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
3055231 .. 3057318
2088 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1419 bp
ATGACTCCTAGCCAGAATTCAACTAGTGCCTTGAGAATGTCTTTTTTGGAGTCGATCGGTTCTCGCGCTATCACAATTCAAATTTCAAATCTAACGGTCACATACAGCTGGGACCCACCAAACCTCGGCTTTTTCAAAATTTCATGCCACCCAATTTCTTGGCTTCAATACCGTTATAAATTCCCAAATCTCATCCTTCGCACAAATTCAAATAATCAAATTTCCTCTGTTTCTCTGCACATCTCGCTCTCTCTTCTCACGAAAACAAAACCCAAAAGAGAAAAAAAAATGAGAGAGTGCATCTCCATCCACATCGGTCAGGCCGGAATCCAAGTCGGAAACGCCTGCTGGGAGCTCTACTGCCTCGAACACGGCATCCAGCCTGATGGCCAAATGCCGAGTGACAAGACCGTCGGTGGCGGAGACGACGCTTTCAACACCTTCTTCAGCGAAACCGGAGCCGGAAAGCACGTCCCCCGTGCCGTATTTTTGGACCTCGAGCCCACCGTTATCGATGAGGTGAGGACCGGCACTTACCGCCAGCTGTTCCACCCGGAGCAGCTCATCAGCGGCAAAGAAGACGCCGCCAATAACTTCGCCAGGGGCCACTACACAATTGGGAAGGAGATTGTTGATCTCTGCCTTGATCGAATCCGAAAGCTTGCTGATAACTGTACGGGGCTTCAAGGTTTTCTGGTGTTCCACGCCGTTGGAGGTGGAACCGGCTCTGGCCTCGGCTCTCTGCTCTTGGAAAGGCTCTCTGTCGATTACGGAAAGAAATCGAAACTTGGGTTCACAGTCTACCCGTCTCCTCAGGTCTCAACCTCCGTCGTTGAGCCATACAACAGCGTGCTTTCCACTCACTCCCTCTTGGAGCACACCGATGTCTCGGTTCTCCTCGACAACGAAGCCATCTACGACATCTGCCGCAGGTCTCTCGACATTGAAAGACCCACTTACACCAACCTCAACAGGCTGATCTCTCAGGTTATTTCCTCACTCACTGCTTCTCTGCGTTTTGACGGTGCACTCAATGTGGACGTGACGGAGTTCCAGACCAATTTGGTCCCCTACCCAAGAATCCACTTCATGCTTTCGTCATACGCACCTGTGATCTCCGCAGAAAAGGCCTACCACGAGCAGCTCTCTGTTGCAGAGATCACTAACAGCGCCTTTGAGCCGGCGTCTATGATGGCGAAATGCGACCCAAGGCACGGAAAATACATGGCCTGCTGTTTGATGTACAGGGGAGATGTGGTTCCGAAAGATGTCAATGCGGCCGTGGCCACGATCAAGACTAAAAGGACCATTCAGTTTGTGGACTGGTGCCGACTGGGTTCAAGTGCGGCATCAACTACCAGCCTCCTACTGTCGTTCCTGGCGGCGACCTGGCCAAGGTTCAGAGGGCTGTGTGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

473

Amino Acids

52.21

Weight (kDa)

8.18

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tubulin PF00091 99 - 309 6.4e-63 Tubulin/FtsZ family, GTPase domain
Tubulin_C PF03953 359 - 446 8.9e-35 Tubulin C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000549)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04820 AT1G50010 AT4G14960 AT4G14960
fragaria_vesca FvH4_1g18660 FvH4_2g03140 FvH4_5g33560 FvH4_6g48940 FvH4_6g48940
malus_domestica MD02G1204800.v1.1 MD05G1106800.v1.1 MD08G1210600.v1.1 MD09G1049500.v1.1 MD10G1111600.v1.1 MD15G1398700.v1.1 MD17G1049700.v1.1
prunus_persica Prupe.1G542600_v2.0.a1 Prupe.3G269300_v2.0.a1 Prupe.6G212700_v2.0.a1 Prupe.8G150900_v2.0.a1
pyrus_communis pycom05g10370 pycom08g18150 pycom10g09640 pycom10g09660 pycom111g04050 pycom15g35470 pycom17g04460
rosa_chinensis RchiOBHm_Chr2g0109481 RchiOBHm_Chr2g0168751 RchiOBHm_Chr3g0453071 RchiOBHm_Chr3g0460741 RchiOBHm_Chr3g0467971 RchiOBHm_Chr4g0400901 RchiOBHm_Chr6g0248011 RchiOBHm_Chr7g0232381 RchiOBHm_Chr7g0238121
rosa_laevigata RLG00000001350 RLG00000009167 RLG00000015163 RLG00000017708 RLG00000017741 RLG00000021807 RLG00000023849 RLG00000026518
rosa_multiflora Rmu_sc0000332.1_g000021 Rmu_sc0000332.1_g000029 Rmu_sc0002416.1_g000007 Rmu_sc0002611.1_g000001 Rmu_sc0003113.1_g000016 Rmu_sc0004780.1_g000001 Rmu_sc0004805.1_g000035 Rmu_sc0010633.1_g000010 Rmu_sc0011069.1_g000003 Rmu_sc0016170.1_g000002 Rmu_sc0025757.1_g000003 Rmu_ssc0000484.1_g000003
rosa_roxburghii Rroxscaffold_2G00134200 Rroxscaffold_4G00321030 Rroxscaffold_7G00213500
rosa_rugosa Rorug01G0283100 Rorug02G0160500 Rorug02G0535300 Rorug04G0027000 Rorug04G0328100 Rorug05G0388700 Rorug05G0530200 Rorug06G0489200 Rorug07G0104900 Rorug07G0209400 Rorug07G0274500
rosa_samantha Rh2BG222800 Rh2BG618900 Rh2CG214400 Rh2CG587200 Rh6BG040200 Rh6CG206500 Rh6DG035600 Rh7BG401600 Rh7BG401700 Rh7DG418400
rosa_wichuraiana Rw2G050240 Rw6G003920 Rw7G035430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 177
AasI GACNNNNNNGTC 1 cut(s) 410
Acc36I ACCTGC 1 cut(s) 921
AccB1I GGYRCC 1 cut(s) 1326
AccI GTMKAC 1 cut(s) 801
AccII CGCG 1 cut(s) 66
AciI CCGC 9 cut(s) 420, 538, 570, 585, 928, 1119, 1277, 1346, 1382
AcoI YGGCCR 4 cut(s) 388, 1278, 1284, 1391
AcsI RAATTY 6 cut(s) 16, 81, 138, 179, 205, 219
AcuI CTGAAG 1 cut(s) 430
AcyI GRCGYC 2 cut(s) 582, 1184
AfaI GTAC 2 cut(s) 676, 1244
AfiI CCNNNNNNNGG 3 cut(s) 125, 1214, 1395
AhlI ACTAGT 1 cut(s) 23
AjiI CACGTC 2 cut(s) 472, 1042
AjnI CCWGG 3 cut(s) 599, 1377, 1388
AloI GAACNNNNNNTCC 4 cut(s) 360, 392, 1242, 1274
AluBI AGCT 6 cut(s) 108, 355, 544, 562, 661, 1144
AluI AGCT 6 cut(s) 108, 355, 544, 562, 661, 1144
Alw21I GWGCWC 3 cut(s) 357, 879, 1030
Alw26I GTCTC 5 cut(s) 417, 813, 823, 892, 939
Alw44I GTGCAC 1 cut(s) 1026
Ama87I CYCGRG 1 cut(s) 497
AoxI GGCC 9 cut(s) 321, 388, 604, 730, 1128, 1227, 1278, 1284, 1391
ApaLI GTGCAC 1 cut(s) 1026
ApeKI GCWGC 2 cut(s) 559, 1141
ApoI RAATTY 6 cut(s) 16, 81, 138, 179, 205, 219
AspLEI GCGC 2 cut(s) 68, 1172
AspS9I GGNCC 6 cut(s) 112, 493, 525, 604, 1066, 1305
AsuC2I CCSGG 1 cut(s) 554
AsuHPI GGTGA 1 cut(s) 532
AvaI CYCGRG 1 cut(s) 497
AvaII GGWCC 5 cut(s) 112, 493, 525, 1066, 1305
AxyI CCTNAGG 1 cut(s) 813
BaeGI GKGCMC 1 cut(s) 1030
BalI TGGCCA 3 cut(s) 390, 1286, 1393
BanI GGYRCC 1 cut(s) 1326
BanII GRGCYC 2 cut(s) 357, 504
BauI CACGAG 1 cut(s) 1136
BbsI GAAGAC 1 cut(s) 585
Bbv12I GWGCWC 3 cut(s) 357, 879, 1030
BbvI GCAGC 2 cut(s) 571, 1153
BccI CCATC 4 cut(s) 314, 380, 920, 1186
BceAI ACGGC 4 cut(s) 388, 467, 692, 1265
BcgI CGANNNNNNTGC 2 cut(s) 919, 953
BciT130I CCWGG 3 cut(s) 601, 1379, 1390
BcnI CCSGG 1 cut(s) 554
BcoDI GTCTC 5 cut(s) 417, 813, 823, 892, 939
BcuI ACTAGT 1 cut(s) 23
BfaI CTAG 2 cut(s) 9, 24
BfoI RGCGCY 1 cut(s) 1173
BfuAI ACCTGC 1 cut(s) 921
BisI GCNGC 8 cut(s) 560, 571, 585, 928, 1142, 1278, 1347, 1383
BlsI GCNGC 8 cut(s) 561, 572, 586, 929, 1143, 1279, 1348, 1384
Bme1390I CCNGG 4 cut(s) 554, 601, 1379, 1390
Bme18I GGWCC 5 cut(s) 112, 493, 525, 1066, 1305
BmeT110I CYCGRG 1 cut(s) 497
BmgBI CACGTC 2 cut(s) 472, 1042
BmgT120I GGNCC 6 cut(s) 112, 493, 525, 604, 1066, 1305
BmiI GGNNCC 8 cut(s) 113, 114, 460, 605, 721, 1068, 1260, 1328
BmrFI CCNGG 4 cut(s) 554, 601, 1379, 1390
BmrI ACTGGG 1 cut(s) 1343
BmsI GCATC 3 cut(s) 309, 384, 1358
BmuI ACTGGG 1 cut(s) 1343
BpiI GAAGAC 1 cut(s) 585
BplI GAGNNNNNCTC 4 cut(s) 287, 319, 1130, 1162
BpuEI CTTGAG 1 cut(s) 52
BpuMI CCSGG 1 cut(s) 554
Bsa29I ATCGAT 1 cut(s) 513
BsaHI GRCGYC 2 cut(s) 582, 1184
BsaI GGTCTC 2 cut(s) 823, 939
BsaJI CCNNGG 6 cut(s) 124, 600, 733, 1208, 1281, 1394
BsaWI WCCGGW 1 cut(s) 455
BsaXI ACNNNNNCTCC 2 cut(s) 1242, 1272
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 1214, 1395
Bse118I RCCGGY 3 cut(s) 527, 722, 1180
Bse1I ACTGG 2 cut(s) 1328, 1338
Bse21I CCTNAGG 1 cut(s) 813
BseBI CCWGG 3 cut(s) 601, 1379, 1390
BseCI ATCGAT 1 cut(s) 513
BseDI CCNNGG 6 cut(s) 124, 600, 733, 1208, 1281, 1394
BseGI GGATG 3 cut(s) 192, 306, 375
BseLI CCNNNNNNNGG 3 cut(s) 125, 1214, 1395
BseMII CTCAG 2 cut(s) 827, 998
BseNI ACTGG 2 cut(s) 1328, 1338
BseRI GAGGAG 2 cut(s) 801, 887
BseSI GKGCMC 1 cut(s) 1030
BseX3I CGGCCG 1 cut(s) 1278
BseXI GCAGC 2 cut(s) 571, 1153
BseYI CCCAGC 2 cut(s) 108, 348
BsgI GTGCAG 1 cut(s) 221
Bsh1236I CGCG 1 cut(s) 66
Bsh1285I CGRYCG 2 cut(s) 57, 1281
BshFI GGCC 9 cut(s) 323, 390, 606, 732, 1130, 1229, 1280, 1286, 1393
BshNI GGYRCC 1 cut(s) 1326
BshVI ATCGAT 1 cut(s) 513
BsiEI CGRYCG 2 cut(s) 57, 1281
BsiHKAI GWGCWC 3 cut(s) 357, 879, 1030
BsiHKCI CYCGRG 1 cut(s) 497
BsiSI CCGG 7 cut(s) 324, 456, 462, 528, 554, 723, 1181
BslFI GGGAC 3 cut(s) 125, 458, 1052
BslI CCNNNNNNNGG 3 cut(s) 125, 1214, 1395
BsmAI GTCTC 5 cut(s) 417, 813, 823, 892, 939
BsmBI CGTCTC 2 cut(s) 417, 813
BsmFI GGGAC 3 cut(s) 125, 458, 1052
BsnI GGCC 9 cut(s) 323, 390, 606, 732, 1130, 1229, 1280, 1286, 1393
Bso31I GGTCTC 2 cut(s) 823, 939
BsoBI CYCGRG 1 cut(s) 497
Bsp1286I GDGCHC 4 cut(s) 357, 504, 879, 1030
Bsp1407I TGTACA 1 cut(s) 1242
Bsp143I GATC 7 cut(s) 54, 634, 646, 978, 1113, 1158, 1290
BspACI CCGC 9 cut(s) 420, 538, 570, 585, 928, 1119, 1277, 1346, 1382
BspANI GGCC 9 cut(s) 323, 390, 606, 732, 1130, 1229, 1280, 1286, 1393
BspCNI CTCAG 2 cut(s) 826, 997
BspDI ATCGAT 1 cut(s) 513
BspFNI CGCG 1 cut(s) 66
BspLI GGNNCC 8 cut(s) 113, 114, 460, 605, 721, 1068, 1260, 1328
BspMI ACCTGC 1 cut(s) 921
BspT107I GGYRCC 1 cut(s) 1326
BspTNI GGTCTC 2 cut(s) 823, 939
BsrFI RCCGGY 3 cut(s) 527, 722, 1180
BsrGI TGTACA 1 cut(s) 1242
BsrI ACTGG 2 cut(s) 1328, 1338
BssAI RCCGGY 3 cut(s) 527, 722, 1180
BssECI CCNNGG 6 cut(s) 124, 600, 733, 1208, 1281, 1394
BssMI GATC 7 cut(s) 54, 634, 646, 978, 1113, 1158, 1290
BssNI GRCGYC 2 cut(s) 582, 1184
BssSI CACGAG 1 cut(s) 1136
BssT1I CCWWGG 2 cut(s) 1208, 1394
Bst2BI CACGAG 1 cut(s) 1136
Bst2UI CCWGG 3 cut(s) 601, 1379, 1390
Bst4CI ACNGT 8 cut(s) 97, 173, 412, 508, 674, 799, 1025, 1371
Bst6I CTCTTC 1 cut(s) 258
BstACI GRCGYC 2 cut(s) 582, 1184
BstAUI TGTACA 1 cut(s) 1242
BstC8I GCNNGC 6 cut(s) 346, 542, 663, 851, 1182, 1231
BstDEI CTNAG 2 cut(s) 813, 984
BstDSI CCRYGG 1 cut(s) 1281
BstENI CCTNNNNNAGG 1 cut(s) 1393
BstF5I GGATG 3 cut(s) 192, 306, 375
BstFNI CGCG 1 cut(s) 66
BstH2I RGCGCY 1 cut(s) 1173
BstHHI GCGC 2 cut(s) 68, 1172
BstKTI GATC 7 cut(s) 57, 637, 649, 981, 1116, 1161, 1293
BstMAI GTCTC 5 cut(s) 417, 813, 823, 892, 939
BstMBI GATC 7 cut(s) 54, 634, 646, 978, 1113, 1158, 1290
BstMCI CGRYCG 2 cut(s) 57, 1281
BstMWI GCNNNNNNNGC 4 cut(s) 244, 537, 1127, 1283
BstNI CCWGG 3 cut(s) 601, 1379, 1390
BstSCI CCNGG 4 cut(s) 552, 599, 1377, 1388
BstSLI GKGCMC 1 cut(s) 1030
BstUI CGCG 1 cut(s) 66
BstV1I GCAGC 2 cut(s) 571, 1153
BstV2I GAAGAC 1 cut(s) 585
BstXI CCANNNNNNTGG 3 cut(s) 159, 386, 710
BstZI CGGCCG 1 cut(s) 1278
Bsu15I ATCGAT 1 cut(s) 513
Bsu36I CCTNAGG 1 cut(s) 813
BsuRI GGCC 9 cut(s) 323, 390, 606, 732, 1130, 1229, 1280, 1286, 1393
BsuTUI ATCGAT 1 cut(s) 513
BtgI CCRYGG 1 cut(s) 1281
BtrI CACGTC 2 cut(s) 472, 1042
BtsCI GGATG 3 cut(s) 192, 306, 375
BtsI GCAGTG 1 cut(s) 1002
BtsIMutI CAGTG 1 cut(s) 1002
BveI ACCTGC 1 cut(s) 921
Cac8I GCNNGC 6 cut(s) 346, 542, 663, 851, 1182, 1231
CfoI GCGC 2 cut(s) 68, 1172
Cfr10I RCCGGY 3 cut(s) 527, 722, 1180
Cfr13I GGNCC 6 cut(s) 112, 493, 525, 604, 1066, 1305
ClaI ATCGAT 1 cut(s) 513
CseI GACGC 3 cut(s) 437, 590, 1173
Csp6I GTAC 2 cut(s) 675, 1243
CviAII CATG 4 cut(s) 144, 1090, 1225, 1416
CviQI GTAC 2 cut(s) 675, 1243
DdeI CTNAG 2 cut(s) 813, 984
DpnI GATC 7 cut(s) 56, 636, 648, 980, 1115, 1160, 1292
DpnII GATC 7 cut(s) 54, 634, 646, 978, 1113, 1158, 1290
DrdI GACNNNNNNGTC 1 cut(s) 410
DseDI GACNNNNNNGTC 1 cut(s) 410
EaeI YGGCCR 4 cut(s) 388, 1278, 1284, 1391
EagI CGGCCG 1 cut(s) 1278
Eam1104I CTCTTC 1 cut(s) 258
EarI CTCTTC 1 cut(s) 258
EciI GGCGGA 1 cut(s) 435
Ecl136II GAGCTC 1 cut(s) 355
EclXI CGGCCG 1 cut(s) 1278
Eco130I CCWWGG 2 cut(s) 1208, 1394
Eco147I AGGCCT 1 cut(s) 1130
Eco24I GRGCYC 2 cut(s) 357, 504
Eco31I GGTCTC 2 cut(s) 823, 939
Eco47I GGWCC 5 cut(s) 112, 493, 525, 1066, 1305
Eco52I CGGCCG 1 cut(s) 1278
Eco53kI GAGCTC 1 cut(s) 355
Eco57I CTGAAG 1 cut(s) 430
Eco81I CCTNAGG 1 cut(s) 813
Eco88I CYCGRG 1 cut(s) 497
EcoICRI GAGCTC 1 cut(s) 355
EcoNI CCTNNNNNAGG 1 cut(s) 1393
EcoO109I RGGNCCY 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 16
EcoRII CCWGG 3 cut(s) 599, 1377, 1388
EcoT14I CCWWGG 2 cut(s) 1208, 1394
EcoT38I GRGCYC 2 cut(s) 357, 504
ErhI CCWWGG 2 cut(s) 1208, 1394
Esp3I CGTCTC 2 cut(s) 417, 813
FaeI CATG 4 cut(s) 147, 1093, 1228, 1419
FaiI YATR 9 cut(s) 103, 145, 177, 841, 1091, 1102, 1190, 1226, 1417
FalI AAGNNNNNCTT 2 cut(s) 940, 972
FaqI GGGAC 3 cut(s) 125, 458, 1052
FatI CATG 4 cut(s) 143, 1089, 1224, 1415
FblI GTMKAC 1 cut(s) 801
Fnu4HI GCNGC 8 cut(s) 560, 571, 585, 928, 1142, 1278, 1347, 1383
FokI GGATG 3 cut(s) 179, 293, 362
FriOI GRGCYC 2 cut(s) 357, 504
Fsp4HI GCNGC 8 cut(s) 560, 571, 585, 928, 1142, 1278, 1347, 1383
FspBI CTAG 2 cut(s) 9, 24
GlaI GCGC 2 cut(s) 67, 1171
GluI GCNGC 8 cut(s) 560, 571, 585, 928, 1142, 1278, 1347, 1383
GsaI CCCAGC 2 cut(s) 112, 352
HaeII RGCGCY 1 cut(s) 1173
HaeIII GGCC 9 cut(s) 323, 390, 606, 732, 1130, 1229, 1280, 1286, 1393
HapII CCGG 7 cut(s) 324, 456, 462, 528, 554, 723, 1181
HgaI GACGC 3 cut(s) 437, 590, 1173
HhaI GCGC 2 cut(s) 68, 1172
Hin1I GRCGYC 2 cut(s) 582, 1184
Hin1II CATG 4 cut(s) 147, 1093, 1228, 1419
Hin6I GCGC 2 cut(s) 66, 1170
HinP1I GCGC 2 cut(s) 66, 1170
HindIII AAGCTT 1 cut(s) 659
HinfI GANTC 5 cut(s) 4, 50, 327, 651, 1080
HpaII CCGG 7 cut(s) 324, 456, 462, 528, 554, 723, 1181
HphI GGTGA 1 cut(s) 532
Hpy166II GTNNAC 5 cut(s) 795, 802, 1028, 1039, 1321
Hpy188I TCNGA 4 cut(s) 338, 656, 1263, 1403
Hpy188III TCNNGA 4 cut(s) 259, 938, 1054, 1294
Hpy8I GTNNAC 5 cut(s) 795, 802, 1028, 1039, 1321
Hpy99I CGWCG 3 cut(s) 416, 431, 833
HpyAV CCTTC 3 cut(s) 206, 451, 616
HpyCH4III ACNGT 8 cut(s) 97, 173, 412, 508, 674, 799, 1025, 1371
HpyCH4IV ACGT 2 cut(s) 471, 1041
HpyCH4V TGCA 5 cut(s) 238, 300, 1028, 1154, 1415
HpyF10VI GCNNNNNNNGC 4 cut(s) 244, 537, 1127, 1283
HpyF3I CTNAG 2 cut(s) 813, 984
HpySE526I ACGT 2 cut(s) 471, 1041
Hsp92I GRCGYC 2 cut(s) 582, 1184
Hsp92II CATG 4 cut(s) 147, 1093, 1228, 1419
HspAI GCGC 2 cut(s) 66, 1170
KflI GGGWCCC 1 cut(s) 112
KroI GCCGGC 1 cut(s) 1180
KroNI GCCGGC 1 cut(s) 1182
Kzo9I GATC 7 cut(s) 54, 634, 646, 978, 1113, 1158, 1290
LmnI GCTCC 4 cut(s) 352, 458, 556, 874
Lsp1109I GCAGC 2 cut(s) 571, 1153
LweI GCATC 3 cut(s) 309, 384, 1358
MaeI CTAG 2 cut(s) 9, 24
MaeII ACGT 2 cut(s) 471, 1041
MaeIII GTNAC 3 cut(s) 97, 401, 1042
MalI GATC 7 cut(s) 56, 636, 648, 980, 1115, 1160, 1292
MboI GATC 7 cut(s) 54, 634, 646, 978, 1113, 1158, 1290
MboII GAAGA 3 cut(s) 245, 436, 590
MfeI CAATTG 1 cut(s) 615
MhlI GDGCHC 4 cut(s) 357, 504, 879, 1030
MlsI TGGCCA 3 cut(s) 390, 1286, 1393
MluNI TGGCCA 3 cut(s) 390, 1286, 1393
MlyI GAGTC 1 cut(s) 59
MmeI TCCRAC 2 cut(s) 316, 691
Mox20I TGGCCA 3 cut(s) 390, 1286, 1393
MroNI GCCGGC 1 cut(s) 1180
MscI TGGCCA 3 cut(s) 390, 1286, 1393
MslI CAYNNNNRTG 1 cut(s) 882
Msp20I TGGCCA 3 cut(s) 390, 1286, 1393
MspA1I CMGCKG 3 cut(s) 108, 544, 570
MspI CCGG 7 cut(s) 324, 456, 462, 528, 554, 723, 1181
MspR9I CCNGG 4 cut(s) 554, 601, 1379, 1390
MunI CAATTG 1 cut(s) 615
MvaI CCWGG 3 cut(s) 601, 1379, 1390
MvnI CGCG 1 cut(s) 66
MwoI GCNNNNNNNGC 4 cut(s) 244, 537, 1127, 1283
NaeI GCCGGC 1 cut(s) 1182
NciI CCSGG 1 cut(s) 554
NdeII GATC 7 cut(s) 54, 634, 646, 978, 1113, 1158, 1290
NgoMIV GCCGGC 1 cut(s) 1180
NlaIII CATG 4 cut(s) 147, 1093, 1228, 1419
NlaIV GGNNCC 8 cut(s) 113, 114, 460, 605, 721, 1068, 1260, 1328
NmeAIII GCCGAG 3 cut(s) 105, 423, 714
NmuCI GTSAC 3 cut(s) 97, 401, 1042
PaeR7I CTCGAG 1 cut(s) 497
PceI AGGCCT 1 cut(s) 1130
PcsI WCGNNNNNNNCGW 1 cut(s) 504
PdiI GCCGGC 1 cut(s) 1182
PfeI GAWTC 3 cut(s) 327, 651, 1080
PkrI GCNGC 8 cut(s) 561, 572, 586, 929, 1143, 1279, 1348, 1384
Ple19I CGATCG 1 cut(s) 57
PleI GAGTC 1 cut(s) 58
PpsI GAGTC 1 cut(s) 58
PpuMI RGGWCCY 1 cut(s) 112
PsiI TTATAA 1 cut(s) 177
Psp124BI GAGCTC 1 cut(s) 357
Psp5II RGGWCCY 1 cut(s) 112
Psp6I CCWGG 3 cut(s) 599, 1377, 1388
PspFI CCCAGC 2 cut(s) 108, 348
PspGI CCWGG 3 cut(s) 599, 1377, 1388
PspN4I GGNNCC 8 cut(s) 113, 114, 460, 605, 721, 1068, 1260, 1328
PspPI GGNCC 6 cut(s) 112, 493, 525, 604, 1066, 1305
PspPPI RGGWCCY 1 cut(s) 112
PspXI VCTCGAGB 1 cut(s) 497
PvuI CGATCG 1 cut(s) 57
PvuII CAGCTG 2 cut(s) 108, 544
RsaI GTAC 2 cut(s) 676, 1244
RsaNI GTAC 2 cut(s) 675, 1243
RseI CAYNNNNRTG 1 cut(s) 882
SacI GAGCTC 1 cut(s) 357
SatI GCNGC 8 cut(s) 560, 571, 585, 928, 1142, 1278, 1347, 1383
Sau3AI GATC 7 cut(s) 54, 634, 646, 978, 1113, 1158, 1290
Sau96I GGNCC 6 cut(s) 112, 493, 525, 604, 1066, 1305
SchI GAGTC 1 cut(s) 59
ScrFI CCNGG 4 cut(s) 554, 601, 1379, 1390
SduI GDGCHC 4 cut(s) 357, 504, 879, 1030
SfaNI GCATC 3 cut(s) 309, 384, 1358
Sfr274I CTCGAG 1 cut(s) 497
SinI GGWCC 5 cut(s) 112, 493, 525, 1066, 1305
SlaI CTCGAG 1 cut(s) 497
SmiMI CAYNNNNRTG 1 cut(s) 882
SmlI CTYRAG 2 cut(s) 31, 497
SmoI CTYRAG 2 cut(s) 31, 497
SpeI ACTAGT 1 cut(s) 23
SseBI AGGCCT 1 cut(s) 1130
SsiI CCGC 9 cut(s) 420, 538, 570, 585, 928, 1119, 1277, 1346, 1382
SspMI CTAG 2 cut(s) 9, 24
SstI GAGCTC 1 cut(s) 357
StuI AGGCCT 1 cut(s) 1130
StyD4I CCNGG 4 cut(s) 552, 599, 1377, 1388
StyI CCWWGG 2 cut(s) 1208, 1394
TaaI ACNGT 8 cut(s) 97, 173, 412, 508, 674, 799, 1025, 1371
TaiI ACGT 2 cut(s) 474, 1044
TaqI TCGA 9 cut(s) 53, 366, 498, 513, 649, 765, 782, 900, 939
TaqII GACCGA 1 cut(s) 305
TatI WGTACW 1 cut(s) 1242
TauI GCSGC 6 cut(s) 573, 587, 930, 1280, 1349, 1385
TfiI GAWTC 3 cut(s) 327, 651, 1080
TscAI CASTG 1 cut(s) 1009
TseFI GTSAC 3 cut(s) 97, 401, 1042
TseI GCWGC 2 cut(s) 559, 1141
Tsp45I GTSAC 3 cut(s) 97, 401, 1042
TspDTI ATGAA 2 cut(s) 132, 1078
TspGWI ACGGA 4 cut(s) 786, 817, 1061, 1230
TspRI CASTG 1 cut(s) 1009
VneI GTGCAC 1 cut(s) 1026
VpaK11BI GGWCC 5 cut(s) 112, 493, 525, 1066, 1305
XagI CCTNNNNNAGG 1 cut(s) 1393
XapI RAATTY 6 cut(s) 16, 81, 138, 179, 205, 219
XcmI CCANNNNNNNNNTGG 2 cut(s) 614, 1315
XhoI CTCGAG 1 cut(s) 497
XmiI GTMKAC 1 cut(s) 801
XspI CTAG 2 cut(s) 9, 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.