Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0001615

Physical Location & Seq

Genomic Coordinates Forward (+)

14413719 .. 14418306

Gene Structure 4588 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g16180.18

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2967 bp

ATGCGGAAGAGAGTTCTGACGAAGCCAAAGTTTCAATACAATTTCATGATGATCGATACTTACAATCTTGAAAACAAAAACTCTTTCATTTTGCATATCCTTGGACATTTAATATTTATACAGTACTTAAACGACAAATGTTTTAATGTTTTGAAATTTTTCTTAACGGGTCATAACGGGTCGGATAACGGGTGTGACACGACACGACCCGTTAAGATAACAGGTGTTACACGAAAACGACACGAAAACGACAAACACGACCCGTTTGCCAGGCCTAGATCACATCCTGCACATATTCTACATTATAGCCTGCATATCGAGCCATTGAAGTGGCTCATCGAGCTACAATCGAACAATTCCATATACCCATTCCATTTAAGGCGAGATAAAATGGGCGGGCAATCTTTGGACCAAAAACAAGCAAGAGATGGAATACCAGAAAGAGAAAGTGTACCCAATATTGCATTTGTTAACACACAACAAATGAAAATTAAACTAGTCATCGTTACCTTAAAAAATAGTCCACATTTTCAAACGTTGTTTATCTCAATTATGGATAACTACATATTAGAGAGATTGCAGGAAGTTAGAGAGAGTATGAGAAAACAATTATTTTGTATTATATTTCACACTGAATCCTTACAAGCTATTTTTATATATATACTGCACTTTCCTTACGAACTACGGCAGCACATCAGCCATTGGATTGATCTTGTGTTTTTATACCTTTACATCCCCCTCAATCTCATGTTTATTAGAACTAAGCATGAGATTGGAACAGTGATCTTGAAACAGAGAAATAGACAATCCTTTAGTAAGAATATCAGCAAATTGCTCCTTGGAAGAGACACGTTGCACGTCTATCTCAATATGCTTTACTCGAGAATGAAAGATTGGATTAGAGGACAATGCTATTCACATAGAAGCTGCCGTATCCAAGAGACCTCTACAACAGTAATGGCAAGTGCTCTGTATTCGGCCTCAGTAGAGGATCTGGACATCGTGTGTTGTTTCTTGGAGGCCCAAGAAATAGAAGATCCCCGGCCCAATCTGCATCCCTATAAGCTTGAAGATGTAGTGCATTTTCACTGCAACTACATGAATATCCAAAGGATTGTGCATAAATTGGCAACATTGATTGACTGCAAATGTAATATTTGTCCTGGTAAAGGTCAAATATTGCAATGTGCCAACAATACTGAGATATTGTTGTGGATTGAAGACATGGTGTGGCACAGGATTTGGCATCTTGCATATCCACCTTGGCTAGAAGATCTTGAATATACTTGGTTTGGGAAACAAATAAGTAAATTACCCAAATCCTTCATATCGAATTCTTATGTCAAGGCTGAAATGATCTCAGAAATAAGAGAAGAACTACTGCCAGCATTAAAGCCTAAACCTAGTAAGAAACTTGTAAATTTCTCATTCCATGCCCTGGGGGCCTATTTAAGGATGAGAAGAGCTCACAAACCCCGGAGGCTGACTCATTATTCAAGTAGATCACCATTTGTAAGGGCTAGAATTAACCTGACAGTGACCATCCTCTTGACTATATCTTTTAGGTACAAGGCGAGCTTTATACATCGTTATAGACCCATTTGGATTCTTCTTAAGCCTGTACACCCACTCACAACTAGGGGTGGGCAAGGTTTGTTTTGCAATTCGGTTCGATGCGGTTTTGAAGCCAAAACTGAAATGAAACCAAACCGTTTGGTTCGGTTCGGTGCGGTTTCAAACGGTTTCGGTTTGGTTTTTAAGAAAAAAATGTACAATTTGCAATTTAACATATTAATAAGCAATTGTGATGTTAAAACATGTTTGTGCAACAAAAGGGTGTCCCTTACAATGTTTATCATAAAACAAACTAGAATATGTGATACCATAACAAAGGTCCTTCAAGTTAATGAACGAAAGAAAGTGATGAATGATGATATTCTAGTGTGGTTGAATGGACATTTAATTAAATATTTATTAATATTTGCGGTGCAGTTTTCAAAAGCCAAAACCGAAACCAAACCGTTTTCTATGTTGCAATTTGGTTTCAAAACTAAAACCGTTTCAAAACTGCAAAACCAAACCATTCGGTGCGGTTTGATTTGGTTCGTGTTTCGGTTTCAGTTTTCGGTTCTAAGTGCCCACCCTTACTTACAAGCAACCAAGTTTTTGCCAATAGGAAGAGGTACAAGTGTCCAAGTCTTCTGTGCTTGCAAAGCATTGATCTCATCTTGCATGGCAACCTGCCATTCTGGGACTTTACTAGCTATTTTATACGAAGATGGTTCTGTAATAGACACAACTGATGATGTGACAGAAGCTGAGAATGCTTTTCTCTTAGAAATCCCACTCTTGGACCTTGTTTCAGGATCCACAGGGATTAAAGACTGTGTAGCTGGGATAGGAGCCATCAAGGGTGAAGATGACATATCTGGGTTAGTAGTAGGTGTAGGCAAAGGCATAGGGTTGGTGGGGGAAGAATTTGATAACTCTGGAGCTGTAGTGGGAGATGCCAAAGACTTTGAAGCACTAAAGATCATAGAAGAAGACTCTAGAGCTCGAGGGGCTGAATGCAATGATGTAGATGATGATGAAGATGTACAAAGATGGTGTTTGTGTAGTATAAGATTGAGAAATCAGATCCAAATAGGGATAAGTGTTTTCATCAAAGATTACATATATATCCCTGCATATCCCAAAAATATTGTCTCAATAGGGGAAAGCAACTACATCGAAAATCCTTTAAATGTGTCAACACTGGTGATTTCTGAAACAAACAGGTATATGGAGACTAAATTGCACATGCATGAAACCAAAACTGTGAAGGCTTTCTCTCAGCAAGACCATTTTGCTCAGGTGTATAAGGACAAGACTTGTGATGCACTATGCCTTTATCTAGTAAAAACTCATGAAACTGCACAAAGGTATGAAACACCTCACTTTTATTCATTAAAGGAAATATCCAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

989

Amino Acids

114.27

Weight (kDa)

9.15

Isoelectric Point (pI)

42.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001615)

Species	Orthologous Gene IDs
malus_domestica	MD00G1174900.v1.1 MD01G1174900.v1.1
pyrus_communis	pycom01g02540 pycom02g08640 pycom02g21750 pycom05g02950 pycom05g07810 pycom07g08030 pycom11g21700 pycom13g23410 pycom16g13490 pycom17g16180
rosa_chinensis	RchiOBHm_Chr6g0247261 RchiOBHm_Chr7g0204481
rosa_laevigata	RLG00000007852 RLG00000013807 RLG00000018815 RLG00000023656 RLG00000036145 RLG00000036151
rosa_multiflora	Rmu_sc0000367.1_g000212
rosa_roxburghii	Rroxscaffold_1G00054610 Rroxscaffold_3G00223650 Rroxscaffold_4G00310010 Rroxscaffold_4G00326510 Rroxscaffold_5G00347060 Rroxscaffold_7G00200030
rosa_rugosa	Rorug02G0466400 Rorug04G0195600 Rorug06G0200000
rosa_samantha	Rh2DG335000 Rh4BG049400 Rh4CG056000 Rh4CG286000 Rh4DG269000 Rh6AG158900 Rh6AG260100 Rh6BG163100 Rh6BG263200 Rh6CG155300 Rh6CG155400 Rh6CG262200 Rh6CG325100 Rh6DG138200 Rh6DG148900 Rh6DG254100 Rh6DG254400 Rh6DG310900 Rh7DG185300
rosa_wichuraiana	Rw1G006920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2249
AccB7I	CCANNNNNTGG	1 cut(s)	1438
AciI	CCGC	6 cut(s)	4, 396, 1677, 1730, 1985, 2091
AclI	AACGTT	1 cut(s)	536
AclWI	GGATC	5 cut(s)	999, 1031, 2361, 2374, 2632
AcsI	RAATTY	4 cut(s)	155, 1333, 1420, 2477
AfaI	GTAC	7 cut(s)	125, 453, 1568, 1623, 1772, 2185, 2598
AfiI	CCNNNNNNNGG	4 cut(s)	1169, 1438, 1452, 2350
AflII	CTTAAG	1 cut(s)	1613
AflIII	ACRYGT	2 cut(s)	849, 1817
AhlI	ACTAGT	1 cut(s)	496
AjiI	CACGTC	1 cut(s)	859
AjnI	CCWGG	4 cut(s)	269, 1162, 1437, 2960
AjuI	GAANNNNNNNTTGG	2 cut(s)	877, 909
Alw21I	GWGCWC	3 cut(s)	970, 1468, 2557
Alw26I	GTCTC	4 cut(s)	840, 935, 2710, 2780
AlwI	GGATC	5 cut(s)	999, 1031, 2361, 2374, 2632
AlwNI	CAGNNNCTG	1 cut(s)	2318
Ama87I	CYCGRG	2 cut(s)	880, 2556
AoxI	GGCC	5 cut(s)	272, 978, 1020, 1043, 1443
ApeKI	GCWGC	2 cut(s)	688, 927
ApoI	RAATTY	4 cut(s)	155, 1333, 1420, 2477
ArsI	GACNNNNNNTTYG	2 cut(s)	2688, 2720
AseI	ATTAAT	2 cut(s)	1793, 1976
Asp700I	GAANNNNTTC	2 cut(s)	158, 2825
AspS9I	GGNCC	6 cut(s)	409, 1021, 1044, 1443, 1894, 2353
AsuC2I	CCSGG	2 cut(s)	1042, 1477
AsuHPI	GGTGA	3 cut(s)	1497, 2426, 2770
AvaI	CYCGRG	2 cut(s)	880, 2556
AvaII	GGWCC	3 cut(s)	409, 1894, 2353
BaeGI	GKGCMC	1 cut(s)	2140
BaeI	ACNNNNGTAYC	2 cut(s)	2175, 2208
BamHI	GGATCC	1 cut(s)	2366
BanII	GRGCYC	2 cut(s)	1468, 2557
BbsI	GAAGAC	3 cut(s)	1227, 2191, 2550
Bbv12I	GWGCWC	3 cut(s)	970, 1468, 2557
BbvI	GCAGC	2 cut(s)	700, 914
BccI	CCATC	5 cut(s)	422, 1550, 2273, 2414, 2598
BceAI	ACGGC	2 cut(s)	701, 915
BcgI	CGANNNNNNTGC	4 cut(s)	248, 282, 2710, 2744
BciT130I	CCWGG	4 cut(s)	271, 1164, 1439, 2962
BciVI	GTATCC	1 cut(s)	944
BcnI	CCSGG	2 cut(s)	1042, 1477
BcoDI	GTCTC	4 cut(s)	840, 935, 2710, 2780
BcuI	ACTAGT	1 cut(s)	496
BfmI	CTRYAG	1 cut(s)	2496
BfrI	CTTAAG	1 cut(s)	1613
BfuAI	ACCTGC	1 cut(s)	2249
BfuI	GTATCC	1 cut(s)	944
BglI	GCCNNNNNGGC	1 cut(s)	1442
BglII	AGATCT	1 cut(s)	1273
BisI	GCNGC	2 cut(s)	689, 928
BlsI	GCNGC	2 cut(s)	690, 929
BmcAI	AGTACT	1 cut(s)	125
Bme1390I	CCNGG	6 cut(s)	271, 1042, 1164, 1439, 1477, 2962
Bme18I	GGWCC	3 cut(s)	409, 1894, 2353
BmeT110I	CYCGRG	2 cut(s)	880, 2556
BmgBI	CACGTC	1 cut(s)	859
BmgT120I	GGNCC	6 cut(s)	409, 1021, 1044, 1443, 1894, 2353
BmiI	GGNNCC	3 cut(s)	1444, 2368, 2404
BmrFI	CCNGG	6 cut(s)	271, 1042, 1164, 1439, 1477, 2962
BmsI	GCATC	5 cut(s)	1063, 1255, 1664, 2497, 2866
BpiI	GAAGAC	3 cut(s)	1227, 2191, 2550
BplI	GAGNNNNNCTC	4 cut(s)	1450, 1482, 1471, 1503
BpmI	CTGGAG	1 cut(s)	2511
Bpu10I	CCTNAGC	1 cut(s)	2850
BpuMI	CCSGG	2 cut(s)	1042, 1477
Bsa29I	ATCGAT	1 cut(s)	54
BsaI	GGTCTC	1 cut(s)	935
BsaJI	CCNNGG	7 cut(s)	100, 838, 1040, 1262, 1437, 1438, 1475
BsaXI	ACNNNNNCTCC	2 cut(s)	2484, 2514
Bsc4I	CCNNNNNNNGG	4 cut(s)	1169, 1438, 1452, 2350
Bse1I	ACTGG	1 cut(s)	2760
Bse3DI	GCAATG	2 cut(s)	1190, 2578
BseBI	CCWGG	4 cut(s)	271, 1164, 1439, 2962
BseCI	ATCGAT	1 cut(s)	54
BseDI	CCNNGG	7 cut(s)	100, 838, 1040, 1262, 1437, 1438, 1475
BseGI	GGATG	5 cut(s)	283, 732, 1054, 1461, 1542
BseLI	CCNNNNNNNGG	4 cut(s)	1169, 1438, 1452, 2350
BseMI	GCAATG	2 cut(s)	1190, 2578
BseMII	CTCAG	6 cut(s)	996, 1191, 1374, 2310, 2846, 2864
BseNI	ACTGG	1 cut(s)	2760
BseSI	GKGCMC	1 cut(s)	2140
BseXI	GCAGC	2 cut(s)	700, 914
BseYI	CCCAGC	1 cut(s)	2393
BsgI	GTGCAG	4 cut(s)	273, 650, 2009, 2898
BshFI	GGCC	5 cut(s)	274, 980, 1022, 1045, 1445
BshVI	ATCGAT	1 cut(s)	54
BsiHKAI	GWGCWC	3 cut(s)	970, 1468, 2557
BsiHKCI	CYCGRG	2 cut(s)	880, 2556
BsiSI	CCGG	2 cut(s)	1042, 1477
BslFI	GGGAC	2 cut(s)	1825, 2266
BslI	CCNNNNNNNGG	4 cut(s)	1169, 1438, 1452, 2350
BsmAI	GTCTC	4 cut(s)	840, 935, 2710, 2780
BsmFI	GGGAC	2 cut(s)	1825, 2266
BsmI	GAATGC	2 cut(s)	2329, 2573
BsnI	GGCC	5 cut(s)	274, 980, 1022, 1045, 1445
Bso31I	GGTCTC	1 cut(s)	935
BsoBI	CYCGRG	2 cut(s)	880, 2556
Bsp1286I	GDGCHC	4 cut(s)	970, 1468, 2140, 2557
Bsp1407I	TGTACA	3 cut(s)	1621, 1770, 2596
BspACI	CCGC	6 cut(s)	4, 396, 1677, 1730, 1985, 2091
BspANI	GGCC	5 cut(s)	274, 980, 1022, 1045, 1445
BspCNI	CTCAG	6 cut(s)	995, 1192, 1373, 2311, 2845, 2863
BspDI	ATCGAT	1 cut(s)	54
BspHI	TCATGA	2 cut(s)	45, 2905
BspLI	GGNNCC	3 cut(s)	1444, 2368, 2404
BspMI	ACCTGC	1 cut(s)	2249
BspPI	GGATC	5 cut(s)	999, 1031, 2361, 2374, 2632
BspQI	GCTCTTC	1 cut(s)	1456
BspTI	CTTAAG	1 cut(s)	1613
BspTNI	GGTCTC	1 cut(s)	935
BsrDI	GCAATG	2 cut(s)	1190, 2578
BsrGI	TGTACA	3 cut(s)	1621, 1770, 2596
BsrI	ACTGG	1 cut(s)	2760
BssECI	CCNNGG	7 cut(s)	100, 838, 1040, 1262, 1437, 1438, 1475
BssT1I	CCWWGG	3 cut(s)	100, 838, 1262
Bst2UI	CCWGG	4 cut(s)	271, 1164, 1439, 2962
Bst6I	CTCTTC	4 cut(s)	2, 838, 1456, 2173
BstAFI	CTTAAG	1 cut(s)	1613
BstAUI	TGTACA	3 cut(s)	1621, 1770, 2596
BstC8I	GCNNGC	5 cut(s)	311, 398, 1386, 1576, 2209
BstDEI	CTNAG	9 cut(s)	762, 982, 1200, 1360, 2132, 2319, 2335, 2832, 2850
BstENI	CCTNNNNNAGG	2 cut(s)	1167, 1450
BstF5I	GGATG	5 cut(s)	283, 732, 1054, 1461, 1542
BstMAI	GTCTC	4 cut(s)	840, 935, 2710, 2780
BstMWI	GCNNNNNNNGC	7 cut(s)	319, 340, 1051, 1442, 2213, 2324, 2561
BstNI	CCWGG	4 cut(s)	271, 1164, 1439, 2962
BstNSI	RCATGY	2 cut(s)	1821, 2803
BstSCI	CCNGG	6 cut(s)	269, 1040, 1162, 1437, 1475, 2960
BstSFI	CTRYAG	1 cut(s)	2496
BstSLI	GKGCMC	1 cut(s)	2140
BstV1I	GCAGC	2 cut(s)	700, 914
BstV2I	GAAGAC	3 cut(s)	1227, 2191, 2550
BstX2I	RGATCY	5 cut(s)	991, 1036, 1273, 2366, 2637
BstXI	CCANNNNNNTGG	1 cut(s)	330
BstYI	RGATCY	5 cut(s)	991, 1036, 1273, 2366, 2637
Bsu15I	ATCGAT	1 cut(s)	54
BsuI	GTATCC	1 cut(s)	944
BsuRI	GGCC	5 cut(s)	274, 980, 1022, 1045, 1445
BsuTUI	ATCGAT	1 cut(s)	54
BtrI	CACGTC	1 cut(s)	859
BtsCI	GGATG	5 cut(s)	283, 732, 1054, 1461, 1542
BtsI	GCAGTG	1 cut(s)	1087
BtsIMutI	CAGTG	5 cut(s)	630, 786, 1087, 1542, 2753
BveI	ACCTGC	1 cut(s)	2249
Cac8I	GCNNGC	5 cut(s)	311, 398, 1386, 1576, 2209
CaiI	CAGNNNCTG	1 cut(s)	2318
CciI	TCATGA	2 cut(s)	45, 2905
Cfr13I	GGNCC	6 cut(s)	409, 1021, 1044, 1443, 1894, 2353
ClaI	ATCGAT	1 cut(s)	54
Csp6I	GTAC	7 cut(s)	124, 452, 1567, 1622, 1771, 2184, 2597
CviQI	GTAC	7 cut(s)	124, 452, 1567, 1622, 1771, 2184, 2597
DdeI	CTNAG	9 cut(s)	762, 982, 1200, 1360, 2132, 2319, 2335, 2832, 2850
DraI	TTTAAA	1 cut(s)	2742
Eam1104I	CTCTTC	4 cut(s)	2, 838, 1456, 2173
EarI	CTCTTC	4 cut(s)	2, 838, 1456, 2173
Ecl136II	GAGCTC	2 cut(s)	1466, 2555
Eco130I	CCWWGG	3 cut(s)	100, 838, 1262
Eco147I	AGGCCT	1 cut(s)	274
Eco24I	GRGCYC	2 cut(s)	1468, 2557
Eco31I	GGTCTC	1 cut(s)	935
Eco47I	GGWCC	3 cut(s)	409, 1894, 2353
Eco53kI	GAGCTC	2 cut(s)	1466, 2555
Eco88I	CYCGRG	2 cut(s)	880, 2556
EcoICRI	GAGCTC	2 cut(s)	1466, 2555
EcoNI	CCTNNNNNAGG	2 cut(s)	1167, 1450
EcoO109I	RGGNCCY	2 cut(s)	1443, 1894
EcoRI	GAATTC	1 cut(s)	1333
EcoRII	CCWGG	4 cut(s)	269, 1162, 1437, 2960
EcoT14I	CCWWGG	3 cut(s)	100, 838, 1262
EcoT22I	ATGCAT	1 cut(s)	2805
EcoT38I	GRGCYC	2 cut(s)	1468, 2557
ErhI	CCWWGG	3 cut(s)	100, 838, 1262
FalI	AAGNNNNNCTT	2 cut(s)	1562, 1594
FaqI	GGGAC	2 cut(s)	1825, 2266
FauI	CCCGC	1 cut(s)	389
Fnu4HI	GCNGC	2 cut(s)	689, 928
FokI	GGATG	5 cut(s)	270, 719, 1041, 1468, 1529
FriOI	GRGCYC	2 cut(s)	1468, 2557
Fsp4HI	GCNGC	2 cut(s)	689, 928
GluI	GCNGC	2 cut(s)	689, 928
GsaI	CCCAGC	1 cut(s)	2397
GsuI	CTGGAG	1 cut(s)	2511
HaeIII	GGCC	5 cut(s)	274, 980, 1022, 1045, 1445
HapII	CCGG	2 cut(s)	1042, 1477
HincII	GTYRAC	2 cut(s)	472, 2751
HindII	GTYRAC	2 cut(s)	472, 2751
HindIII	AAGCTT	1 cut(s)	1064
HinfI	GANTC	4 cut(s)	635, 1486, 1606, 2546
HpaI	GTTAAC	1 cut(s)	472
HpaII	CCGG	2 cut(s)	1042, 1477
HphI	GGTGA	3 cut(s)	1497, 2426, 2770
Hpy166II	GTNNAC	5 cut(s)	452, 472, 524, 1624, 2751
Hpy188I	TCNGA	5 cut(s)	18, 184, 1363, 2637, 2767
Hpy8I	GTNNAC	5 cut(s)	452, 472, 524, 1624, 2751
HpyAV	CCTTC	3 cut(s)	1333, 1907, 2815
HpyCH4IV	ACGT	3 cut(s)	536, 851, 858
HpyF10VI	GCNNNNNNNGC	7 cut(s)	319, 340, 1051, 1442, 2213, 2324, 2561
HpyF3I	CTNAG	9 cut(s)	762, 982, 1200, 1360, 2132, 2319, 2335, 2832, 2850
HpySE526I	ACGT	3 cut(s)	536, 851, 858
KspAI	GTTAAC	1 cut(s)	472
LguI	GCTCTTC	1 cut(s)	1456
LmnI	GCTCC	3 cut(s)	840, 2402, 2492
Lsp1109I	GCAGC	2 cut(s)	700, 914
LweI	GCATC	5 cut(s)	1063, 1255, 1664, 2497, 2866
MaeII	ACGT	3 cut(s)	536, 851, 858
MaeIII	GTNAC	5 cut(s)	194, 226, 505, 1537, 2308
MfeI	CAATTG	1 cut(s)	1801
MflI	RGATCY	5 cut(s)	991, 1036, 1273, 2366, 2637
MhlI	GDGCHC	4 cut(s)	970, 1468, 2140, 2557
MlyI	GAGTC	2 cut(s)	1480, 2540
MmeI	TCCRAC	1 cut(s)	162
Mph1103I	ATGCAT	1 cut(s)	2805
MroXI	GAANNNNTTC	2 cut(s)	158, 2825
MslI	CAYNNNNRTG	3 cut(s)	328, 1822, 2802
MspCI	CTTAAG	1 cut(s)	1613
MspI	CCGG	2 cut(s)	1042, 1477
MspR9I	CCNGG	6 cut(s)	271, 1042, 1164, 1439, 1477, 2962
MunI	CAATTG	1 cut(s)	1801
Mva1269I	GAATGC	2 cut(s)	2329, 2573
MvaI	CCWGG	4 cut(s)	271, 1164, 1439, 2962
MwoI	GCNNNNNNNGC	7 cut(s)	319, 340, 1051, 1442, 2213, 2324, 2561
NciI	CCSGG	2 cut(s)	1042, 1477
NlaIV	GGNNCC	3 cut(s)	1444, 2368, 2404
NmuCI	GTSAC	3 cut(s)	194, 1537, 2308
NsiI	ATGCAT	1 cut(s)	2805
NspI	RCATGY	2 cut(s)	1821, 2803
PacI	TTAATTAA	1 cut(s)	1965
PaeR7I	CTCGAG	2 cut(s)	880, 2556
PagI	TCATGA	2 cut(s)	45, 2905
PasI	CCCWGGG	1 cut(s)	1438
PceI	AGGCCT	1 cut(s)	274
PciI	ACATGT	1 cut(s)	1817
PciSI	GCTCTTC	1 cut(s)	1456
PcsI	WCGNNNNNNNCGW	1 cut(s)	255
PctI	GAATGC	2 cut(s)	2329, 2573
PdmI	GAANNNNTTC	2 cut(s)	158, 2825
PfeI	GAWTC	2 cut(s)	635, 1606
PflMI	CCANNNNNTGG	1 cut(s)	1438
PkrI	GCNGC	2 cut(s)	690, 929
PleI	GAGTC	2 cut(s)	1480, 2540
PpsI	GAGTC	2 cut(s)	1480, 2540
PpuMI	RGGWCCY	1 cut(s)	1894
PscI	ACATGT	1 cut(s)	1817
PshBI	ATTAAT	2 cut(s)	1793, 1976
Psp124BI	GAGCTC	2 cut(s)	1468, 2557
Psp1406I	AACGTT	1 cut(s)	536
Psp5II	RGGWCCY	1 cut(s)	1894
Psp6I	CCWGG	4 cut(s)	269, 1162, 1437, 2960
PspFI	CCCAGC	1 cut(s)	2393
PspGI	CCWGG	4 cut(s)	269, 1162, 1437, 2960
PspN4I	GGNNCC	3 cut(s)	1444, 2368, 2404
PspPI	GGNCC	6 cut(s)	409, 1021, 1044, 1443, 1894, 2353
PspPPI	RGGWCCY	1 cut(s)	1894
PspXI	VCTCGAGB	1 cut(s)	2556
PstNI	CAGNNNCTG	1 cut(s)	2318
PsuI	RGATCY	5 cut(s)	991, 1036, 1273, 2366, 2637
RsaI	GTAC	7 cut(s)	125, 453, 1568, 1623, 1772, 2185, 2598
RsaNI	GTAC	7 cut(s)	124, 452, 1567, 1622, 1771, 2184, 2597
RseI	CAYNNNNRTG	3 cut(s)	328, 1822, 2802
SacI	GAGCTC	2 cut(s)	1468, 2557
SapI	GCTCTTC	1 cut(s)	1456
SatI	GCNGC	2 cut(s)	689, 928
Sau96I	GGNCC	6 cut(s)	409, 1021, 1044, 1443, 1894, 2353
ScaI	AGTACT	1 cut(s)	125
SchI	GAGTC	2 cut(s)	1480, 2540
ScrFI	CCNGG	6 cut(s)	271, 1042, 1164, 1439, 1477, 2962
SduI	GDGCHC	4 cut(s)	970, 1468, 2140, 2557
SfaNI	GCATC	5 cut(s)	1063, 1255, 1664, 2497, 2866
SfcI	CTRYAG	1 cut(s)	2496
Sfr274I	CTCGAG	2 cut(s)	880, 2556
SinI	GGWCC	3 cut(s)	409, 1894, 2353
SlaI	CTCGAG	2 cut(s)	880, 2556
SmiMI	CAYNNNNRTG	3 cut(s)	328, 1822, 2802
SmlI	CTYRAG	3 cut(s)	880, 1613, 2556
SmoI	CTYRAG	3 cut(s)	880, 1613, 2556
SpeI	ACTAGT	1 cut(s)	496
SseBI	AGGCCT	1 cut(s)	274
SsiI	CCGC	6 cut(s)	4, 396, 1677, 1730, 1985, 2091
SspI	AATATT	7 cut(s)	114, 460, 1156, 1179, 1970, 1980, 2701
SstI	GAGCTC	2 cut(s)	1468, 2557
StuI	AGGCCT	1 cut(s)	274
StyD4I	CCNGG	6 cut(s)	269, 1040, 1162, 1437, 1475, 2960
StyI	CCWWGG	3 cut(s)	100, 838, 1262
TaiI	ACGT	3 cut(s)	539, 854, 861
TaqI	TCGA	9 cut(s)	54, 318, 339, 350, 881, 1331, 1672, 2557, 2730
TatI	WGTACW	4 cut(s)	123, 1621, 1770, 2596
TfiI	GAWTC	2 cut(s)	635, 1606
TscAI	CASTG	5 cut(s)	637, 786, 1094, 1542, 2760
TseFI	GTSAC	3 cut(s)	194, 1537, 2308
TseI	GCWGC	2 cut(s)	688, 927
Tsp45I	GTSAC	3 cut(s)	194, 1537, 2308
TspRI	CASTG	5 cut(s)	637, 786, 1094, 1542, 2760
Van91I	CCANNNNNTGG	1 cut(s)	1438
Vha464I	CTTAAG	1 cut(s)	1613
VpaK11BI	GGWCC	3 cut(s)	409, 1894, 2353
VspI	ATTAAT	2 cut(s)	1793, 1976
XagI	CCTNNNNNAGG	2 cut(s)	1167, 1450
XapI	RAATTY	4 cut(s)	155, 1333, 1420, 2477
XbaI	TCTAGA	1 cut(s)	2549
XceI	RCATGY	2 cut(s)	1821, 2803
XhoI	CTCGAG	2 cut(s)	880, 2556
XmnI	GAANNNNTTC	2 cut(s)	158, 2825
ZrmI	AGTACT	1 cut(s)	125
Zsp2I	ATGCAT	1 cut(s)	2805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.