Rorug06G0200000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001615
Physical Location & Seq
Reverse (-)
32128788 .. 32131572
2785 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0200000.1

Sequence Viewer

Length: 2199 bp
ATGCCATCAATGGCTTACATTTCTCTCTCCAAACCCTCCCAATGGCGACCCCGCTCCCTCACCCTCCTCCGCCTCTTCTGCTCCTCCACCGAAACCCCAACCCCCCAACCCGACCCGCAAAATGGATCCGCCGCCGCCCCGACGGCCCCAAGACCCAGGCAGCCGCGTCGGGTCCGGAGCCCGGAAAAGCCCGAGGACATTATCTGCAGAATGATGGCGAATCGGGCCTGGACGACCCGGTTGCAGAACTCCATCCGCGATTTGGTACCCGAATTCGACCACAATCTCGTCTGGAATGTCCTTCACGGAGCCAAGACCTCCGACCAAGCCCTCCAATTCTTCCGATGGGTCGAGCGTTCCAGGTTGTTTCAGCATGATAGGGAGACCCATTTGAAGATAATTGAGATTCTGGGCCGAGCTTCGAAGCTCAACCATGCCCGGTGTATCCTACTAGATATGCCCAAGAAGGGTGTGCAATGGGATGAGGACCTCTTCATTCATCTTATTGATAGTTATGGCAAGGCCGGCATTGTTCAGGAGTCGGTCAAGCTTTTCAATCAGATGAAGGAACTGGGCGTGGAGCGGAGTCTCAAGTCGTATGAGGCTCTGTTCAAGAGTATTTTGCGGAGGGGGCGGTATATGATGGGGAAGAGGTACTTTAATCATATGTTGGCTGAGGGAATAGAGCCGACTCGGCATACTTATAATATTATGATTTGGGGTTTCTTCTTGTCCTTGAGATTGGAGACTGCAAAGCGGTTTTTTGAGGACATGAAAAGTAGAGGAGTTAGTCCTGATGTTGTCACCTATAACACCATGATTAATGGGTATAATCGGTTTAAGCTGATGGATGAGGCCGAGCAGTTGTTTGTAGAGTTGAAGGGAAAGAATATACAGCCCAATGTTATAAGTTATACTACCATGATTAAAGGGTATGTTTCTGTTGGGAGAGTGGATGATGGGTTCAGGCTGTTTCAAGAGATGAAGTCTTTTGGTATCAAGCCTAATGATGTCACCTTTTCGACTTTATTGCCAGGCCTTTGTGATGCGGAGAAAAAGGATGAAGCTCAGAATATATTGAGTGAGATGGTTGAGAGGCATATTGCTCCCAAGGATAATTCAATCTTTGAGAAATTGTTATATTGTCAGTGTAAGTCTGGAGATTTGGATGCGGCAGCCGATGTGCTCAAGGCAATGATTAGGCTGCACATTCCGACAGAAGCTGGTCATTATGGTATCCTTATTGAGAACTTTTGCAAGGCCGGGGTGTATGATCGAGCAGTTCACTTGCTTGATAAGCTCATTGAGAAAGAAATTATTATGAGGCCCCAGACTACTATGGAATTGGAGGCTAGTGCTTACAACCCAATGATTGAGCATCTGTGCAACCATGGGCAGACAGGTAAAGCTGAAGTCCTCTTCAGGCAGTTGATGAAAAAGGGTGTTCAGGATTCAGTTGCCTTCAATAATCTGATCCGTGGGCATGCCAAGGAGGGAAATTCTGATTCTGCGTTTGAGATTTTGAAGATTATGGGTAGAAGAGGGGTTCCTAGAGAAGCAGATTCCTACAAGTTGCTCATTAAGAGCTACCTAAGTAAAGGTGAACCAGCTGATGCTAAAACAGCTTTGGACAGTATGATTGAAAATGGGCATGTTCCAGAATCATCACTATTCAGGTCAGTAATGGAGAGTCTATTTGAAGATGGTAGGGTTCAAACGGCAAGCCGCGTAATGAAGAGTATGGTAGAGAAGGGAGTGAATGAGAACATGGATTTAGTTGCCAAGATCTTGGAAGCCCTCTTTATCAGAGGTCATGTTGAGGAAGCGCTTGGACGGATTGATCTACTTATGCAAAGTGGGTGTGCACCTGAATTTGACAGCCTCTTATCTCTTCTTGCTGAAAAAGGAAAGACCATTGCAGCTGTTAAGCTATTAGATTTTTGCCTTGAGAGAGATTGCATGGTAGAATTTTCAAGCTATGATAAGGTGTTGGATGCTCTCTTAGCATCAGGAAAGACTCTAAATGCGTACTCAATTTTGTGTAAAATAATGGAGAAGGGAGGGGTCACTGATTGGCGTAGCACTGACGATCTGATTAAGAGCCTCAATCTAGAGGGTAACACAAAACAAGCTGACGTCCTCTCTAGAATGATAAAGGGAGGGAAGGAGAAAGACAGTCGAAGTAAAATGGGTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

732

Amino Acids

83.0

Weight (kDa)

8.67

Isoelectric Point (pI)

40.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 199 - 242 1.1e-06 PPR repeat family
PPR_3 PF13812 221 - 277 5.1e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 234 - 277 2.3e-14 PPR repeat family
PPR_3 PF13812 254 - 313 8.3e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 261 - 292 4.2e-10 PPR repeat
PPR_2 PF13041 265 - 313 3.7e-16 PPR repeat family
PPR PF01535 268 - 298 2.1e-07 PPR repeat
PPR_3 PF13812 289 - 344 7.3e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 296 - 329 3.3e-09 PPR repeat
PPR_2 PF13041 300 - 349 9.9e-18 PPR repeat family
PPR PF01535 303 - 333 4.5e-08 PPR repeat
PPR_long PF17177 318 - 437 5.6e-12 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 323 - 370 3.1e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 332 - 364 2.3e-07 PPR repeat
PPR_2 PF13041 484 - 529 1.6e-07 PPR repeat family
TPR_24 PF23276 495 - 611 2.9e-08 Fungal tetratrico peptide repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 705, 908
AatII GACGTC 1 cut(s) 2139
Acc65I GGTACC 1 cut(s) 265
AccB1I GGYRCC 1 cut(s) 265
AccBSI CCGCTC 2 cut(s) 54, 583
AccII CGCG 3 cut(s) 166, 258, 1728
AccIII TCCGGA 1 cut(s) 174
AclWI GGATC 3 cut(s) 120, 133, 1468
AcsI RAATTY 4 cut(s) 272, 1498, 1871, 1967
AcuI CTGAAG 2 cut(s) 1405, 1431
AcyI GRCGYC 1 cut(s) 2136
AfaI GTAC 3 cut(s) 267, 656, 2030
AfeI AGCGCT 1 cut(s) 1827
AfiI CCNNNNNNNGG 5 cut(s) 42, 122, 181, 262, 467
AjnI CCWGG 4 cut(s) 155, 227, 359, 1033
AloI GAACNNNNNNTCC 2 cut(s) 947, 979
Alw21I GWGCWC 2 cut(s) 1188, 1867
Alw26I GTCTC 3 cut(s) 377, 593, 740
Alw44I GTGCAC 1 cut(s) 1863
AlwI GGATC 3 cut(s) 120, 133, 1468
AlwNI CAGNNNCTG 1 cut(s) 1223
Ama87I CYCGRG 1 cut(s) 191
Aor13HI TCCGGA 1 cut(s) 174
Aor51HI AGCGCT 1 cut(s) 1827
AoxI GGCC 8 cut(s) 144, 225, 412, 522, 855, 1036, 1260, 1325
ApaLI GTGCAC 1 cut(s) 1863
ApeKI GCWGC 4 cut(s) 160, 1175, 1204, 1919
ApoI RAATTY 4 cut(s) 272, 1498, 1871, 1967
AseI ATTAAT 1 cut(s) 822
Asp718I GGTACC 1 cut(s) 265
AspLEI GCGC 1 cut(s) 1828
AspS9I GGNCC 6 cut(s) 145, 172, 225, 412, 487, 1326
AsuC2I CCSGG 4 cut(s) 182, 238, 439, 1264
AsuHPI GGTGA 4 cut(s) 52, 796, 1006, 1613
AsuII TTCGAA 1 cut(s) 422
AvaI CYCGRG 1 cut(s) 191
AvaII GGWCC 2 cut(s) 172, 487
BaeGI GKGCMC 1 cut(s) 1867
BamHI GGATCC 1 cut(s) 125
BanI GGYRCC 1 cut(s) 265
BanII GRGCYC 1 cut(s) 182
Bbv12I GWGCWC 2 cut(s) 1188, 1867
BbvCI CCTCAGC 1 cut(s) 675
BbvI GCAGC 4 cut(s) 172, 1187, 1191, 1931
BccI CCATC 9 cut(s) 13, 208, 260, 339, 637, 841, 953, 1081, 1697
BceAI ACGGC 2 cut(s) 159, 1734
BcgI CGANNNNNNTGC 6 cut(s) 149, 183, 223, 257, 1012, 1046
BciT130I CCWGG 4 cut(s) 157, 229, 361, 1035
BciVI GTATCC 2 cut(s) 455, 1247
BcnI CCSGG 4 cut(s) 182, 238, 439, 1264
BcoDI GTCTC 3 cut(s) 377, 593, 740
BfaI CTAG 5 cut(s) 452, 1353, 1551, 2111, 2145
BfmI CTRYAG 1 cut(s) 205
BfoI RGCGCY 1 cut(s) 1829
BfuI GTATCC 2 cut(s) 455, 1247
BglI GCCNNNNNGGC 2 cut(s) 143, 694
BglII AGATCT 1 cut(s) 1785
BisI GCNGC 9 cut(s) 132, 135, 161, 164, 1173, 1176, 1205, 1726, 1920
BlsI GCNGC 9 cut(s) 133, 136, 162, 165, 1174, 1177, 1206, 1727, 1921
Bme1390I CCNGG 8 cut(s) 157, 182, 229, 238, 361, 439, 1035, 1264
Bme18I GGWCC 2 cut(s) 172, 487
BmeT110I CYCGRG 1 cut(s) 191
BmgT120I GGNCC 6 cut(s) 145, 172, 225, 412, 487, 1326
BmiI GGNNCC 8 cut(s) 127, 147, 173, 179, 267, 310, 1328, 1548
BmrFI CCNGG 8 cut(s) 157, 182, 229, 238, 361, 439, 1035, 1264
BmrI ACTGGG 1 cut(s) 581
BmsI GCATC 6 cut(s) 1036, 1159, 1387, 1603, 1984, 2015
BmuI ACTGGG 1 cut(s) 581
BpmI CTGGAG 1 cut(s) 1179
Bpu10I CCTNAGC 1 cut(s) 675
Bpu14I TTCGAA 1 cut(s) 422
BpuEI CTTGAG 4 cut(s) 575, 757, 1172, 1967
BpuMI CCSGG 4 cut(s) 182, 238, 439, 1264
BsaHI GRCGYC 1 cut(s) 2136
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 7 cut(s) 155, 192, 1110, 1263, 1390, 1477, 1488
BsaWI WCCGGW 1 cut(s) 174
Bsc4I CCNNNNNNNGG 5 cut(s) 42, 122, 181, 262, 467
Bse118I RCCGGY 1 cut(s) 524
Bse1I ACTGG 1 cut(s) 576
Bse3DI GCAATG 3 cut(s) 482, 1200, 1914
BseAI TCCGGA 1 cut(s) 174
BseBI CCWGG 4 cut(s) 157, 229, 361, 1035
BseDI CCNNGG 7 cut(s) 155, 192, 1110, 1263, 1390, 1477, 1488
BseGI GGATG 7 cut(s) 252, 487, 856, 961, 1066, 1174, 1999
BseLI CCNNNNNNNGG 5 cut(s) 42, 122, 181, 262, 467
BseMI GCAATG 3 cut(s) 482, 1200, 1914
BseMII CTCAG 2 cut(s) 666, 1082
BseNI ACTGG 1 cut(s) 576
BseRI GAGGAG 3 cut(s) 56, 73, 798
BseSI GKGCMC 1 cut(s) 1867
BseXI GCAGC 4 cut(s) 172, 1187, 1191, 1931
BsgI GTGCAG 1 cut(s) 1190
Bsh1236I CGCG 3 cut(s) 166, 258, 1728
BshFI GGCC 8 cut(s) 146, 227, 414, 524, 857, 1038, 1262, 1327
BshNI GGYRCC 1 cut(s) 265
BsiHKAI GWGCWC 2 cut(s) 1188, 1867
BsiHKCI CYCGRG 1 cut(s) 191
BsiSI CCGG 6 cut(s) 175, 182, 238, 439, 525, 1263
BslI CCNNNNNNNGG 5 cut(s) 42, 122, 181, 262, 467
BsmAI GTCTC 3 cut(s) 377, 593, 740
BsnI GGCC 8 cut(s) 146, 227, 414, 524, 857, 1038, 1262, 1327
Bso31I GGTCTC 1 cut(s) 377
BsoBI CYCGRG 1 cut(s) 191
Bsp119I TTCGAA 1 cut(s) 422
Bsp1286I GDGCHC 3 cut(s) 182, 1188, 1867
Bsp13I TCCGGA 1 cut(s) 174
Bsp143I GATC 6 cut(s) 125, 1273, 1473, 1785, 1840, 2089
Bsp19I CCATGG 1 cut(s) 1390
BspANI GGCC 8 cut(s) 146, 227, 414, 524, 857, 1038, 1262, 1327
BspCNI CTCAG 2 cut(s) 667, 1081
BspEI TCCGGA 1 cut(s) 174
BspFNI CGCG 3 cut(s) 166, 258, 1728
BspLI GGNNCC 8 cut(s) 127, 147, 173, 179, 267, 310, 1328, 1548
BspMAI CTGCAG 1 cut(s) 209
BspPI GGATC 3 cut(s) 120, 133, 1468
BspT104I TTCGAA 1 cut(s) 422
BspT107I GGYRCC 1 cut(s) 265
BspTNI GGTCTC 1 cut(s) 377
BsrBI CCGCTC 2 cut(s) 54, 583
BsrDI GCAATG 3 cut(s) 482, 1200, 1914
BsrFI RCCGGY 1 cut(s) 524
BsrI ACTGG 1 cut(s) 576
BssAI RCCGGY 1 cut(s) 524
BssECI CCNNGG 7 cut(s) 155, 192, 1110, 1263, 1390, 1477, 1488
BssMI GATC 6 cut(s) 125, 1273, 1473, 1785, 1840, 2089
BssNI GRCGYC 1 cut(s) 2136
BssT1I CCWWGG 3 cut(s) 1110, 1390, 1488
Bst2UI CCWGG 4 cut(s) 157, 229, 361, 1035
Bst4CI ACNGT 2 cut(s) 1634, 2177
Bst6I CTCTTC 7 cut(s) 80, 497, 644, 1424, 1534, 1730, 1896
BstACI GRCGYC 1 cut(s) 2136
BstBI TTCGAA 1 cut(s) 422
BstC8I GCNNGC 3 cut(s) 526, 1485, 1723
BstDEI CTNAG 4 cut(s) 675, 1068, 1592, 2002
BstDSI CCRYGG 2 cut(s) 1390, 1477
BstF5I GGATG 7 cut(s) 252, 487, 856, 961, 1066, 1174, 1999
BstFNI CGCG 3 cut(s) 166, 258, 1728
BstH2I RGCGCY 1 cut(s) 1829
BstHHI GCGC 1 cut(s) 1828
BstKTI GATC 6 cut(s) 128, 1276, 1476, 1788, 1843, 2092
BstMAI GTCTC 3 cut(s) 377, 593, 740
BstMBI GATC 6 cut(s) 125, 1273, 1473, 1785, 1840, 2089
BstMWI GCNNNNNNNGC 9 cut(s) 78, 143, 224, 525, 631, 694, 1297, 1622, 2003
BstNI CCWGG 4 cut(s) 157, 229, 361, 1035
BstNSI RCATGY 2 cut(s) 1487, 1655
BstSCI CCNGG 8 cut(s) 155, 180, 227, 236, 359, 437, 1033, 1262
BstSFI CTRYAG 1 cut(s) 205
BstSLI GKGCMC 1 cut(s) 1867
BstUI CGCG 3 cut(s) 166, 258, 1728
BstV1I GCAGC 4 cut(s) 172, 1187, 1191, 1931
BstX2I RGATCY 2 cut(s) 125, 1785
BstXI CCANNNNNNTGG 1 cut(s) 1789
BstYI RGATCY 2 cut(s) 125, 1785
BsuI GTATCC 2 cut(s) 455, 1247
BsuRI GGCC 8 cut(s) 146, 227, 414, 524, 857, 1038, 1262, 1327
BtgI CCRYGG 2 cut(s) 1390, 1477
BtsCI GGATG 7 cut(s) 252, 487, 856, 961, 1066, 1174, 1999
BtsIMutI CAGTG 3 cut(s) 1154, 2067, 2082
Cac8I GCNNGC 3 cut(s) 526, 1485, 1723
CaiI CAGNNNCTG 1 cut(s) 1223
CfoI GCGC 1 cut(s) 1828
Cfr10I RCCGGY 1 cut(s) 524
Cfr13I GGNCC 6 cut(s) 145, 172, 225, 412, 487, 1326
CseI GACGC 1 cut(s) 155
Csp6I GTAC 3 cut(s) 266, 655, 2029
CviQI GTAC 3 cut(s) 266, 655, 2029
DdeI CTNAG 4 cut(s) 675, 1068, 1592, 2002
DpnI GATC 6 cut(s) 127, 1275, 1475, 1787, 1842, 2091
DpnII GATC 6 cut(s) 125, 1273, 1473, 1785, 1840, 2089
Eam1104I CTCTTC 7 cut(s) 80, 497, 644, 1424, 1534, 1730, 1896
EarI CTCTTC 7 cut(s) 80, 497, 644, 1424, 1534, 1730, 1896
EciI GGCGGA 2 cut(s) 59, 118
Eco130I CCWWGG 3 cut(s) 1110, 1390, 1488
Eco147I AGGCCT 1 cut(s) 1038
Eco24I GRGCYC 1 cut(s) 182
Eco31I GGTCTC 1 cut(s) 377
Eco47I GGWCC 2 cut(s) 172, 487
Eco47III AGCGCT 1 cut(s) 1827
Eco57I CTGAAG 2 cut(s) 1405, 1431
Eco88I CYCGRG 1 cut(s) 191
EcoO109I RGGNCCY 2 cut(s) 487, 1326
EcoRI GAATTC 1 cut(s) 272
EcoRII CCWGG 4 cut(s) 155, 227, 359, 1033
EcoT14I CCWWGG 3 cut(s) 1110, 1390, 1488
EcoT38I GRGCYC 1 cut(s) 182
ErhI CCWWGG 3 cut(s) 1110, 1390, 1488
FalI AAGNNNNNCTT 2 cut(s) 641, 673
FauI CCCGC 2 cut(s) 59, 123
FauNDI CATATG 1 cut(s) 666
Fnu4HI GCNGC 9 cut(s) 132, 135, 161, 164, 1173, 1176, 1205, 1726, 1920
FokI GGATG 7 cut(s) 239, 494, 863, 968, 1073, 1181, 2006
FriOI GRGCYC 1 cut(s) 182
Fsp4HI GCNGC 9 cut(s) 132, 135, 161, 164, 1173, 1176, 1205, 1726, 1920
FspBI CTAG 5 cut(s) 452, 1353, 1551, 2111, 2145
GlaI GCGC 1 cut(s) 1827
GluI GCNGC 9 cut(s) 132, 135, 161, 164, 1173, 1176, 1205, 1726, 1920
GsuI CTGGAG 1 cut(s) 1179
HaeII RGCGCY 1 cut(s) 1829
HaeIII GGCC 8 cut(s) 146, 227, 414, 524, 857, 1038, 1262, 1327
HapII CCGG 6 cut(s) 175, 182, 238, 439, 525, 1263
HgaI GACGC 1 cut(s) 155
HhaI GCGC 1 cut(s) 1828
Hin1I GRCGYC 1 cut(s) 2136
Hin6I GCGC 1 cut(s) 1826
HinP1I GCGC 1 cut(s) 1826
HindIII AAGCTT 1 cut(s) 548
HpaII CCGG 6 cut(s) 175, 182, 238, 439, 525, 1263
HphI GGTGA 4 cut(s) 52, 796, 1006, 1613
Hpy166II GTNNAC 3 cut(s) 1285, 1604, 1865
Hpy188I TCNGA 9 cut(s) 322, 344, 561, 1071, 1215, 1473, 1504, 1808, 2094
Hpy8I GTNNAC 3 cut(s) 1285, 1604, 1865
Hpy99I CGWCG 2 cut(s) 145, 171
HpyAV CCTTC 8 cut(s) 311, 460, 559, 874, 1471, 1744, 2050, 2158
HpyCH4III ACNGT 2 cut(s) 1634, 2177
HpyCH4IV ACGT 1 cut(s) 2136
HpyF10VI GCNNNNNNNGC 9 cut(s) 78, 143, 224, 525, 631, 694, 1297, 1622, 2003
HpyF3I CTNAG 4 cut(s) 675, 1068, 1592, 2002
HpySE526I ACGT 1 cut(s) 2136
Hsp92I GRCGYC 1 cut(s) 2136
HspAI GCGC 1 cut(s) 1826
Kpn2I TCCGGA 1 cut(s) 174
KpnI GGTACC 1 cut(s) 269
KroI GCCGGC 1 cut(s) 524
KroNI GCCGGC 1 cut(s) 526
Kzo9I GATC 6 cut(s) 125, 1273, 1473, 1785, 1840, 2089
LmnI GCTCC 6 cut(s) 59, 86, 177, 308, 580, 1111
Lsp1109I GCAGC 4 cut(s) 172, 1187, 1191, 1931
LweI GCATC 6 cut(s) 1036, 1159, 1387, 1603, 1984, 2015
MaeI CTAG 5 cut(s) 452, 1353, 1551, 2111, 2145
MaeII ACGT 1 cut(s) 2136
MaeIII GTNAC 4 cut(s) 802, 1012, 2065, 2117
MalI GATC 6 cut(s) 127, 1275, 1475, 1787, 1842, 2091
MbiI CCGCTC 2 cut(s) 54, 583
MboI GATC 6 cut(s) 125, 1273, 1473, 1785, 1840, 2089
MflI RGATCY 2 cut(s) 125, 1785
MhlI GDGCHC 3 cut(s) 182, 1188, 1867
MlyI GAGTC 5 cut(s) 548, 595, 685, 1699, 2011
MmeI TCCRAC 3 cut(s) 345, 1238, 1971
MroI TCCGGA 1 cut(s) 174
MroNI GCCGGC 1 cut(s) 524
MseI TTAA 7 cut(s) 660, 822, 840, 927, 1581, 1926, 2097
MspA1I CMGCKG 2 cut(s) 1610, 1922
MspI CCGG 6 cut(s) 175, 182, 238, 439, 525, 1263
MspR9I CCNGG 8 cut(s) 157, 182, 229, 238, 361, 439, 1035, 1264
MvaI CCWGG 4 cut(s) 157, 229, 361, 1035
MvnI CGCG 3 cut(s) 166, 258, 1728
MwoI GCNNNNNNNGC 9 cut(s) 78, 143, 224, 525, 631, 694, 1297, 1622, 2003
NaeI GCCGGC 1 cut(s) 526
NciI CCSGG 4 cut(s) 182, 238, 439, 1264
NcoI CCATGG 1 cut(s) 1390
NdeI CATATG 1 cut(s) 666
NdeII GATC 6 cut(s) 125, 1273, 1473, 1785, 1840, 2089
NgoMIV GCCGGC 1 cut(s) 524
NlaIV GGNNCC 8 cut(s) 127, 147, 173, 179, 267, 310, 1328, 1548
NmeAIII GCCGAG 3 cut(s) 440, 673, 883
NmuCI GTSAC 3 cut(s) 802, 1012, 2065
NspI RCATGY 2 cut(s) 1487, 1655
NspV TTCGAA 1 cut(s) 422
PaeI GCATGC 1 cut(s) 1487
PceI AGGCCT 1 cut(s) 1038
PdiI GCCGGC 1 cut(s) 526
PfeI GAWTC 6 cut(s) 220, 406, 1451, 1505, 1562, 1661
PkrI GCNGC 9 cut(s) 133, 136, 162, 165, 1174, 1177, 1206, 1727, 1921
PleI GAGTC 5 cut(s) 547, 594, 685, 1698, 2011
PpsI GAGTC 5 cut(s) 547, 594, 685, 1698, 2011
PpuMI RGGWCCY 1 cut(s) 487
PshBI ATTAAT 1 cut(s) 822
PsiI TTATAA 2 cut(s) 705, 908
Psp5II RGGWCCY 1 cut(s) 487
Psp6I CCWGG 4 cut(s) 155, 227, 359, 1033
PspGI CCWGG 4 cut(s) 155, 227, 359, 1033
PspN4I GGNNCC 8 cut(s) 127, 147, 173, 179, 267, 310, 1328, 1548
PspPI GGNCC 6 cut(s) 145, 172, 225, 412, 487, 1326
PspPPI RGGWCCY 1 cut(s) 487
PstI CTGCAG 1 cut(s) 209
PstNI CAGNNNCTG 1 cut(s) 1223
PsuI RGATCY 2 cut(s) 125, 1785
PvuII CAGCTG 2 cut(s) 1610, 1922
RsaI GTAC 3 cut(s) 267, 656, 2030
RsaNI GTAC 3 cut(s) 266, 655, 2029
SaqAI TTAA 7 cut(s) 660, 822, 840, 927, 1581, 1926, 2097
SatI GCNGC 9 cut(s) 132, 135, 161, 164, 1173, 1176, 1205, 1726, 1920
Sau3AI GATC 6 cut(s) 125, 1273, 1473, 1785, 1840, 2089
Sau96I GGNCC 6 cut(s) 145, 172, 225, 412, 487, 1326
SchI GAGTC 5 cut(s) 548, 595, 685, 1699, 2011
ScrFI CCNGG 8 cut(s) 157, 182, 229, 238, 361, 439, 1035, 1264
SduI GDGCHC 3 cut(s) 182, 1188, 1867
SfaNI GCATC 6 cut(s) 1036, 1159, 1387, 1603, 1984, 2015
SfcI CTRYAG 1 cut(s) 205
SfuI TTCGAA 1 cut(s) 422
SinI GGWCC 2 cut(s) 172, 487
SmlI CTYRAG 4 cut(s) 590, 736, 1187, 1946
SmoI CTYRAG 4 cut(s) 590, 736, 1187, 1946
SphI GCATGC 1 cut(s) 1487
SseBI AGGCCT 1 cut(s) 1038
SspI AATATT 1 cut(s) 709
SspMI CTAG 5 cut(s) 452, 1353, 1551, 2111, 2145
StuI AGGCCT 1 cut(s) 1038
StyD4I CCNGG 8 cut(s) 155, 180, 227, 236, 359, 437, 1033, 1262
StyI CCWWGG 3 cut(s) 1110, 1390, 1488
TaaI ACNGT 2 cut(s) 1634, 2177
TaiI ACGT 1 cut(s) 2139
TaqI TCGA 6 cut(s) 276, 351, 422, 1022, 1276, 2179
TaqII GACCGA 1 cut(s) 532
TauI GCSGC 5 cut(s) 134, 137, 166, 1175, 1728
TfiI GAWTC 6 cut(s) 220, 406, 1451, 1505, 1562, 1661
Tru1I TTAA 7 cut(s) 660, 822, 840, 927, 1581, 1926, 2097
Tru9I TTAA 7 cut(s) 660, 822, 840, 927, 1581, 1926, 2097
TscAI CASTG 3 cut(s) 1154, 2074, 2089
TseFI GTSAC 3 cut(s) 802, 1012, 2065
TseI GCWGC 4 cut(s) 160, 1175, 1204, 1919
Tsp45I GTSAC 3 cut(s) 802, 1012, 2065
TspDTI ATGAA 8 cut(s) 484, 488, 578, 788, 998, 1077, 1448, 1748
TspGWI ACGGA 3 cut(s) 321, 1466, 1849
TspRI CASTG 3 cut(s) 1154, 2074, 2089
VneI GTGCAC 1 cut(s) 1863
VpaK11BI GGWCC 2 cut(s) 172, 487
VspI ATTAAT 1 cut(s) 822
XapI RAATTY 4 cut(s) 272, 1498, 1871, 1967
XbaI TCTAGA 2 cut(s) 2110, 2144
XceI RCATGY 2 cut(s) 1487, 1655
XcmI CCANNNNNNNNNTGG 1 cut(s) 259
XspI CTAG 5 cut(s) 452, 1353, 1551, 2111, 2145
ZraI GACGTC 1 cut(s) 2137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.