RchiOBHm_Chr2g0103891

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
15230405 .. 15232130
1726 bp
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UTR
Exon/CDS
Intron
PRQ47823

Sequence Viewer

Length: 183 bp
ATGCAGAAGCATTTACACATCATTCTACTGCCACTGTTCCTTTGTGTATTGGTTAATACTATCTTGACCTCTTATTCTTATTCAGATTGTTGGAACAGTGTGCAGTCAGATTGTTTAACTGCTTTGAATTCAGTTATGGCTCCAAAGATGAGGTGGACAAGAAGTAAGAGATTGTTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

60

Amino Acids

6.98

Weight (kDa)

9.02

Isoelectric Point (pI)

68.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 127
AgsI TTSAA 1 cut(s) 127
ApoI RAATTY 1 cut(s) 127
BmiI GGNNCC 1 cut(s) 141
BsgI GTGCAG 1 cut(s) 122
BspLI GGNNCC 1 cut(s) 141
Bst4CI ACNGT 2 cut(s) 36, 98
BtsIMutI CAGTG 2 cut(s) 32, 103
CviJI RGCY 1 cut(s) 140
CviKI_1 RGCY 1 cut(s) 140
EcoRI GAATTC 1 cut(s) 127
FaiI YATR 1 cut(s) 137
FspEI CC 9 cut(s) 35, 45, 53, 76, 82, 122, 136, 139, 156
Hpy166II GTNNAC 1 cut(s) 156
Hpy188I TCNGA 2 cut(s) 85, 109
Hpy188III TCNNGA 1 cut(s) 64
Hpy8I GTNNAC 1 cut(s) 156
HpyCH4III ACNGT 2 cut(s) 36, 98
HpyCH4V TGCA 2 cut(s) 4, 103
LmnI GCTCC 1 cut(s) 145
MluCI AATT 1 cut(s) 127
MmeI TCCRAC 1 cut(s) 71
MnlI CCTC 2 cut(s) 79, 144
MseI TTAA 2 cut(s) 54, 116
NlaIV GGNNCC 1 cut(s) 141
PspN4I GGNNCC 1 cut(s) 141
SaqAI TTAA 2 cut(s) 54, 116
SetI ASST 2 cut(s) 71, 155
SgeI CNNG 2 cut(s) 76, 171
Sse9I AATT 1 cut(s) 127
TaaI ACNGT 2 cut(s) 36, 98
TasI AATT 1 cut(s) 127
Tru1I TTAA 2 cut(s) 54, 116
Tru9I TTAA 2 cut(s) 54, 116
TscAI CASTG 2 cut(s) 39, 103
TspRI CASTG 2 cut(s) 39, 103
XapI RAATTY 1 cut(s) 127
XcmI CCANNNNNNNNNTGG 1 cut(s) 150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.