Rw2G032850

No description available

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
53901110 .. 53903145
2036 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G032850.1

Sequence Viewer

Length: 450 bp
ATGATCAATTTGCATATTAACAGAAATACTGAAAGTGAAGTAGAGATTCATAGAAAGAGTTGGATCAGGTTTGAGAGGGATCTTTCAGCAAAAGAAGAGATCGTATGCAACAGTCTTTGTATCGTTTTACTACCACTGTTCCTTTGTCTGTTGGTTAACATTATCTTGATCTCTTATTATTATTCAGACACTAGAAACGGTGTGCTATCAGCTTCTGTAACTGTGGGTTCAGTTATGGCGTCAAAGATGAGATGCAGCAGAACAAAAAAATTGCTACAACAAGGTCATGCTGAAAATTATAATGATCAAAGGAGAATGGAAGAAATGTATAATCATCAGAATTTTGTTTCCAGTACAGTTCAAAGTGAAGGTTCTGTTTCTAAGAGAGGTCAACATTCTGAGGTTAAATCAAGGACATCAACACGTGCATTTGAGTTAGCAATGACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

149

Amino Acids

17.13

Weight (kDa)

8.98

Isoelectric Point (pI)

50.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 300
AclWI GGATC 2 cut(s) 71, 87
AcsI RAATTY 1 cut(s) 340
AcvI CACGTG 1 cut(s) 425
AcyI GRCGYC 1 cut(s) 239
AfaI GTAC 1 cut(s) 355
AflIII ACRYGT 1 cut(s) 422
AgsI TTSAA 1 cut(s) 362
AluBI AGCT 1 cut(s) 212
AluI AGCT 1 cut(s) 212
AlwI GGATC 2 cut(s) 71, 87
AlwNI CAGNNNCTG 1 cut(s) 215
ApeKI GCWGC 1 cut(s) 255
ApoI RAATTY 1 cut(s) 340
BbrPI CACGTG 1 cut(s) 425
BbvI GCAGC 1 cut(s) 267
BclI TGATCA 2 cut(s) 3, 304
BfaI CTAG 1 cut(s) 192
BisI GCNGC 1 cut(s) 256
BlsI GCNGC 1 cut(s) 257
BmsI GCATC 1 cut(s) 242
BsaAI YACGTR 1 cut(s) 425
BsaHI GRCGYC 1 cut(s) 239
Bse1I ACTGG 1 cut(s) 351
Bse3DI GCAATG 1 cut(s) 447
BseMI GCAATG 1 cut(s) 447
BseMII CTCAG 1 cut(s) 390
BseNI ACTGG 1 cut(s) 351
BseXI GCAGC 1 cut(s) 267
Bsp143I GATC 6 cut(s) 3, 63, 79, 99, 168, 304
BspCNI CTCAG 1 cut(s) 391
BspPI GGATC 2 cut(s) 71, 87
BsrDI GCAATG 1 cut(s) 447
BsrI ACTGG 1 cut(s) 351
BssMI GATC 6 cut(s) 3, 63, 79, 99, 168, 304
BssNI GRCGYC 1 cut(s) 239
Bst4CI ACNGT 5 cut(s) 113, 138, 200, 223, 358
Bst6I CTCTTC 1 cut(s) 90
BstACI GRCGYC 1 cut(s) 239
BstBAI YACGTR 1 cut(s) 425
BstDEI CTNAG 2 cut(s) 381, 399
BstKTI GATC 6 cut(s) 6, 66, 82, 102, 171, 307
BstMBI GATC 6 cut(s) 3, 63, 79, 99, 168, 304
BstV1I GCAGC 1 cut(s) 267
BstX2I RGATCY 1 cut(s) 79
BstYI RGATCY 1 cut(s) 79
BtsIMutI CAGTG 1 cut(s) 134
CaiI CAGNNNCTG 1 cut(s) 215
CseI GACGC 1 cut(s) 228
Csp6I GTAC 1 cut(s) 354
CviAII CATG 1 cut(s) 287
CviJI RGCY 1 cut(s) 212
CviKI_1 RGCY 1 cut(s) 212
CviQI GTAC 1 cut(s) 354
DdeI CTNAG 2 cut(s) 381, 399
DpnI GATC 6 cut(s) 5, 65, 81, 101, 170, 306
DpnII GATC 6 cut(s) 3, 63, 79, 99, 168, 304
Eam1104I CTCTTC 1 cut(s) 90
EarI CTCTTC 1 cut(s) 90
Eco72I CACGTG 1 cut(s) 425
FaeI CATG 1 cut(s) 290
FaiI YATR 8 cut(s) 15, 51, 106, 236, 288, 300, 330, 448
FatI CATG 1 cut(s) 286
FbaI TGATCA 2 cut(s) 3, 304
Fnu4HI GCNGC 1 cut(s) 256
Fsp4HI GCNGC 1 cut(s) 256
FspBI CTAG 1 cut(s) 192
GluI GCNGC 1 cut(s) 256
HgaI GACGC 1 cut(s) 228
Hin1I GRCGYC 1 cut(s) 239
Hin1II CATG 1 cut(s) 290
HincII GTYRAC 2 cut(s) 157, 392
HindII GTYRAC 2 cut(s) 157, 392
HinfI GANTC 1 cut(s) 46
HpaI GTTAAC 1 cut(s) 157
Hpy166II GTNNAC 2 cut(s) 157, 392
Hpy188I TCNGA 3 cut(s) 187, 339, 400
Hpy188III TCNNGA 1 cut(s) 166
Hpy8I GTNNAC 2 cut(s) 157, 392
HpyAV CCTTC 1 cut(s) 362
HpyCH4III ACNGT 5 cut(s) 113, 138, 200, 223, 358
HpyCH4IV ACGT 1 cut(s) 424
HpyCH4V TGCA 4 cut(s) 13, 108, 255, 428
HpyF3I CTNAG 2 cut(s) 381, 399
HpySE526I ACGT 1 cut(s) 424
Hsp92I GRCGYC 1 cut(s) 239
Hsp92II CATG 1 cut(s) 290
Ksp22I TGATCA 2 cut(s) 3, 304
KspAI GTTAAC 1 cut(s) 157
Kzo9I GATC 6 cut(s) 3, 63, 79, 99, 168, 304
LpnPI CCDG 2 cut(s) 52, 364
Lsp1109I GCAGC 1 cut(s) 267
LweI GCATC 1 cut(s) 242
MaeI CTAG 1 cut(s) 192
MaeII ACGT 1 cut(s) 424
MaeIII GTNAC 1 cut(s) 217
MalI GATC 6 cut(s) 5, 65, 81, 101, 170, 306
MboI GATC 6 cut(s) 3, 63, 79, 99, 168, 304
MboII GAAGA 2 cut(s) 107, 332
MflI RGATCY 1 cut(s) 79
MluCI AATT 4 cut(s) 7, 269, 295, 340
MmeI TCCRAC 1 cut(s) 41
MnlI CCTC 3 cut(s) 69, 380, 394
MseI TTAA 3 cut(s) 18, 156, 405
NdeII GATC 6 cut(s) 3, 63, 79, 99, 168, 304
NlaIII CATG 1 cut(s) 290
PfeI GAWTC 1 cut(s) 46
PkrI GCNGC 1 cut(s) 257
PmaCI CACGTG 1 cut(s) 425
PmlI CACGTG 1 cut(s) 425
Ppu21I YACGTR 1 cut(s) 425
PsiI TTATAA 1 cut(s) 300
PspCI CACGTG 1 cut(s) 425
PstNI CAGNNNCTG 1 cut(s) 215
PsuI RGATCY 1 cut(s) 79
RsaI GTAC 1 cut(s) 355
RsaNI GTAC 1 cut(s) 354
SaqAI TTAA 3 cut(s) 18, 156, 405
SatI GCNGC 1 cut(s) 256
Sau3AI GATC 6 cut(s) 3, 63, 79, 99, 168, 304
SetI ASST 7 cut(s) 71, 214, 286, 373, 391, 405, 427
SfaNI GCATC 1 cut(s) 242
SgeI CNNG 9 cut(s) 79, 178, 204, 293, 299, 363, 423, 435, 437
Sse9I AATT 4 cut(s) 7, 269, 295, 340
SspMI CTAG 1 cut(s) 192
TaaI ACNGT 5 cut(s) 113, 138, 200, 223, 358
TaiI ACGT 1 cut(s) 427
TasI AATT 4 cut(s) 7, 269, 295, 340
TatI WGTACW 1 cut(s) 353
TfiI GAWTC 1 cut(s) 46
Tru1I TTAA 3 cut(s) 18, 156, 405
Tru9I TTAA 3 cut(s) 18, 156, 405
TscAI CASTG 1 cut(s) 141
TseI GCWGC 1 cut(s) 255
TspDTI ATGAA 1 cut(s) 38
TspRI CASTG 1 cut(s) 141
XapI RAATTY 1 cut(s) 340
XspI CTAG 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.