Rh7BG056200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
3748235 .. 3760674
12440 bp
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UTR
Exon/CDS
Intron
Rh7BG056200.1

Sequence Viewer

Length: 399 bp
ATGTTGCAGGGCTGGTCTCGCTATTCACTGAAGCCTGAGGATAATCATCACCCACCCTGCAATATAACTGCTGAAATGTCAAATAGTTTTTGTGCAAATGATGAACAAAATACTGCTTCAAGTACAGAAGAAACATCCATCACCGTCAATTCCTATCACGACCTGCTCTCAAACTCGAATTTTACTGATAATCTGATAGAGAAAGATGTAGCTAAAATCAAATACAAAAGGAGTTGCTCTGTAGAACAAGTAACTCCATCGAGCACAAATCACAGCTGCATAATCATTGATCCAGACATTGACCAAAAACAAGAGTACGAAGAAGAGGAAGCAGAACAAGGAAGCACCACTTCATCATCACTGGCAAAAGAAGAACATGAGAAGGAAAACAAGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

132

Amino Acids

14.92

Weight (kDa)

4.57

Isoelectric Point (pI)

61.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 171
AclWI GGATC 1 cut(s) 284
AcsI RAATTY 1 cut(s) 178
AcuI CTGAAG 1 cut(s) 50
AfaI GTAC 2 cut(s) 124, 317
AgsI TTSAA 1 cut(s) 120
AluBI AGCT 2 cut(s) 212, 276
AluI AGCT 2 cut(s) 212, 276
Alw21I GWGCWC 1 cut(s) 266
Alw26I GTCTC 1 cut(s) 21
AlwI GGATC 1 cut(s) 284
ApeKI GCWGC 1 cut(s) 276
ApoI RAATTY 1 cut(s) 178
AsuHPI GGTGA 2 cut(s) 41, 133
AxyI CCTNAGG 1 cut(s) 36
Bbv12I GWGCWC 1 cut(s) 266
BbvI GCAGC 1 cut(s) 263
BccI CCATC 2 cut(s) 146, 265
BcoDI GTCTC 1 cut(s) 21
BfmI CTRYAG 1 cut(s) 240
BfuAI ACCTGC 1 cut(s) 171
BisI GCNGC 1 cut(s) 277
BlsI GCNGC 1 cut(s) 278
BsaBI GATNNNNATC 1 cut(s) 45
BsaI GGTCTC 1 cut(s) 21
Bse1I ACTGG 1 cut(s) 366
Bse21I CCTNAGG 1 cut(s) 36
Bse8I GATNNNNATC 1 cut(s) 45
BseGI GGATG 1 cut(s) 134
BseJI GATNNNNATC 1 cut(s) 45
BseMII CTCAG 1 cut(s) 27
BseNI ACTGG 1 cut(s) 366
BseXI GCAGC 1 cut(s) 263
BsiHKAI GWGCWC 1 cut(s) 266
BsmAI GTCTC 1 cut(s) 21
Bso31I GGTCTC 1 cut(s) 21
Bsp1286I GDGCHC 1 cut(s) 266
Bsp143I GATC 1 cut(s) 289
BspCNI CTCAG 1 cut(s) 28
BspMI ACCTGC 1 cut(s) 171
BspPI GGATC 1 cut(s) 284
BspTNI GGTCTC 1 cut(s) 21
BsrI ACTGG 1 cut(s) 366
BssMI GATC 1 cut(s) 289
Bst4CI ACNGT 1 cut(s) 145
Bst6I CTCTTC 1 cut(s) 318
BstDEI CTNAG 1 cut(s) 36
BstF5I GGATG 1 cut(s) 134
BstKTI GATC 1 cut(s) 292
BstMAI GTCTC 1 cut(s) 21
BstMBI GATC 1 cut(s) 289
BstMWI GCNNNNNNNGC 1 cut(s) 18
BstSFI CTRYAG 1 cut(s) 240
BstV1I GCAGC 1 cut(s) 263
Bsu36I CCTNAGG 1 cut(s) 36
BtsCI GGATG 1 cut(s) 134
BtsIMutI CAGTG 2 cut(s) 26, 359
BveI ACCTGC 1 cut(s) 171
Csp6I GTAC 2 cut(s) 123, 316
CviAII CATG 1 cut(s) 377
CviJI RGCY 4 cut(s) 12, 34, 212, 276
CviKI_1 RGCY 4 cut(s) 12, 34, 212, 276
CviQI GTAC 2 cut(s) 123, 316
DdeI CTNAG 1 cut(s) 36
DpnI GATC 1 cut(s) 291
DpnII GATC 1 cut(s) 289
Eam1104I CTCTTC 1 cut(s) 318
EarI CTCTTC 1 cut(s) 318
Eco31I GGTCTC 1 cut(s) 21
Eco57I CTGAAG 1 cut(s) 50
Eco81I CCTNAGG 1 cut(s) 36
FaeI CATG 1 cut(s) 380
FaiI YATR 3 cut(s) 65, 281, 378
FalI AAGNNNNNCTT 2 cut(s) 334, 366
FatI CATG 1 cut(s) 376
Fnu4HI GCNGC 1 cut(s) 277
FokI GGATG 1 cut(s) 121
Fsp4HI GCNGC 1 cut(s) 277
GluI GCNGC 1 cut(s) 277
Hin1II CATG 1 cut(s) 380
HphI GGTGA 2 cut(s) 41, 133
Hpy188I TCNGA 1 cut(s) 195
Hpy188III TCNNGA 2 cut(s) 158, 293
HpyAV CCTTC 1 cut(s) 376
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4V TGCA 4 cut(s) 7, 60, 95, 279
HpyF10VI GCNNNNNNNGC 1 cut(s) 18
HpyF3I CTNAG 1 cut(s) 36
Hsp92II CATG 1 cut(s) 380
Kzo9I GATC 1 cut(s) 289
LpnPI CCDG 5 cut(s) 48, 70, 176, 306, 347
Lsp1109I GCAGC 1 cut(s) 263
MaeIII GTNAC 1 cut(s) 250
MalI GATC 1 cut(s) 291
MboI GATC 1 cut(s) 289
MboII GAAGA 4 cut(s) 140, 332, 335, 383
MhlI GDGCHC 1 cut(s) 266
MluCI AATT 2 cut(s) 148, 178
MnlI CCTC 2 cut(s) 31, 319
MspA1I CMGCKG 1 cut(s) 276
MwoI GCNNNNNNNGC 1 cut(s) 18
NdeII GATC 1 cut(s) 289
NlaIII CATG 1 cut(s) 380
PkrI GCNGC 1 cut(s) 278
PvuII CAGCTG 1 cut(s) 276
RsaI GTAC 2 cut(s) 124, 317
RsaNI GTAC 2 cut(s) 123, 316
SatI GCNGC 1 cut(s) 277
Sau3AI GATC 1 cut(s) 289
SduI GDGCHC 1 cut(s) 266
SetI ASST 3 cut(s) 165, 214, 278
SfcI CTRYAG 1 cut(s) 240
Sse9I AATT 2 cut(s) 148, 178
TaaI ACNGT 1 cut(s) 145
TaqI TCGA 2 cut(s) 176, 260
TasI AATT 2 cut(s) 148, 178
TatI WGTACW 1 cut(s) 122
TscAI CASTG 2 cut(s) 33, 366
TseI GCWGC 1 cut(s) 276
TspDTI ATGAA 2 cut(s) 117, 342
TspRI CASTG 2 cut(s) 33, 366
XapI RAATTY 1 cut(s) 178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.