WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0131751 RchiOBHm_Chr3g0476491 RchiOBHm_Chr5g0047881 RchiOBHm_Chr5g0067151 RchiOBHm_Chr7g0239741 RchiOBHm_Chr7g0239751 RchiOBHm_Chr7g0239811 RchiOBHm_Chr7g0240001 |
| rosa_laevigata | RLG00000017465 RLG00000029281 RLG00000036286 |
| rosa_multiflora | Rmu_sc0000389.1_g000043 Rmu_sc0000498.1_g000011 Rmu_sc0007193.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00059850 Rroxscaffold_2G00120160 Rroxscaffold_3G00230140 |
| rosa_rugosa | Rorug01G0042500 Rorug04G0302000 |
| rosa_samantha | Rh1AG075400 Rh1AG171100 Rh1BG070500 Rh1CG245100 Rh2AG507000 Rh2CG297600 Rh4BG005100 Rh4CG110500 Rh4CG199600 Rh4DG067400 Rh4DG185200 Rh5AG442100 Rh5BG324900 Rh5BG459100 Rh5CG481300 Rh5DG191400 Rh5DG204200 Rh5DG474100 Rh6AG039800 Rh7AG211400 Rh7BG184600 Rh7CG153700 Rh7CG246700 Rh7DG321300 |
| rosa_wichuraiana | Rw1G018320 Rw4G029660 Rw5G041310 Rw7G040450 Rw7G040500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 71 |
| AccI | GTMKAC | 1 cut(s) | 78 |
| AciI | CCGC | 1 cut(s) | 61 |
| AfaI | GTAC | 1 cut(s) | 200 |
| AjnI | CCWGG | 1 cut(s) | 12 |
| AluBI | AGCT | 1 cut(s) | 137 |
| AluI | AGCT | 1 cut(s) | 137 |
| Ama87I | CYCGRG | 1 cut(s) | 71 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 240 |
| AsuHPI | GGTGA | 2 cut(s) | 121, 178 |
| AvaI | CYCGRG | 1 cut(s) | 71 |
| BbsI | GAAGAC | 1 cut(s) | 36 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 26, 60 |
| BciT130I | CCWGG | 1 cut(s) | 14 |
| BfaI | CTAG | 1 cut(s) | 138 |
| BmcAI | AGTACT | 1 cut(s) | 200 |
| Bme1390I | CCNGG | 1 cut(s) | 14 |
| BmeT110I | CYCGRG | 1 cut(s) | 71 |
| BmrFI | CCNGG | 1 cut(s) | 14 |
| BpiI | GAAGAC | 1 cut(s) | 36 |
| BsaJI | CCNNGG | 2 cut(s) | 12, 167 |
| BseBI | CCWGG | 1 cut(s) | 14 |
| BseDI | CCNNGG | 2 cut(s) | 12, 167 |
| BsiHKCI | CYCGRG | 1 cut(s) | 71 |
| BsoBI | CYCGRG | 1 cut(s) | 71 |
| Bsp19I | CCATGG | 1 cut(s) | 167 |
| BspACI | CCGC | 1 cut(s) | 61 |
| BssECI | CCNNGG | 2 cut(s) | 12, 167 |
| BssT1I | CCWWGG | 1 cut(s) | 167 |
| Bst2UI | CCWGG | 1 cut(s) | 14 |
| Bst4CI | ACNGT | 1 cut(s) | 203 |
| Bst6I | CTCTTC | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 1 cut(s) | 219 |
| BstDSI | CCRYGG | 1 cut(s) | 167 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 134 |
| BstNI | CCWGG | 1 cut(s) | 14 |
| BstSCI | CCNGG | 1 cut(s) | 12 |
| BstV2I | GAAGAC | 1 cut(s) | 36 |
| BtgI | CCRYGG | 1 cut(s) | 167 |
| Cac8I | GCNNGC | 1 cut(s) | 219 |
| Csp6I | GTAC | 1 cut(s) | 199 |
| CviAII | CATG | 1 cut(s) | 168 |
| CviJI | RGCY | 5 cut(s) | 58, 69, 128, 137, 178 |
| CviKI_1 | RGCY | 5 cut(s) | 58, 69, 128, 137, 178 |
| CviQI | GTAC | 1 cut(s) | 199 |
| Eam1104I | CTCTTC | 1 cut(s) | 107 |
| EarI | CTCTTC | 1 cut(s) | 107 |
| Eco130I | CCWWGG | 1 cut(s) | 167 |
| Eco88I | CYCGRG | 1 cut(s) | 71 |
| EcoRII | CCWGG | 1 cut(s) | 12 |
| EcoT14I | CCWWGG | 1 cut(s) | 167 |
| ErhI | CCWWGG | 1 cut(s) | 167 |
| FaeI | CATG | 1 cut(s) | 171 |
| FaiI | YATR | 4 cut(s) | 155, 169, 209, 247 |
| FatI | CATG | 1 cut(s) | 167 |
| FauI | CCCGC | 1 cut(s) | 68 |
| FblI | GTMKAC | 1 cut(s) | 78 |
| FspBI | CTAG | 1 cut(s) | 138 |
| Hin1II | CATG | 1 cut(s) | 171 |
| HincII | GTYRAC | 1 cut(s) | 79 |
| HindII | GTYRAC | 1 cut(s) | 79 |
| HinfI | GANTC | 2 cut(s) | 5, 98 |
| HphI | GGTGA | 2 cut(s) | 121, 178 |
| Hpy166II | GTNNAC | 1 cut(s) | 79 |
| Hpy8I | GTNNAC | 1 cut(s) | 79 |
| Hpy99I | CGWCG | 3 cut(s) | 83, 86, 89 |
| HpyAV | CCTTC | 1 cut(s) | 224 |
| HpyCH4III | ACNGT | 1 cut(s) | 203 |
| HpyCH4V | TGCA | 1 cut(s) | 221 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 134 |
| Hsp92II | CATG | 1 cut(s) | 171 |
| LpnPI | CCDG | 3 cut(s) | 26, 143, 202 |
| MaeI | CTAG | 1 cut(s) | 138 |
| MboII | GAAGA | 2 cut(s) | 41, 124 |
| MluCI | AATT | 1 cut(s) | 181 |
| MnlI | CCTC | 4 cut(s) | 19, 67, 80, 168 |
| MroXI | GAANNNNTTC | 1 cut(s) | 240 |
| MseI | TTAA | 1 cut(s) | 180 |
| MspR9I | CCNGG | 1 cut(s) | 14 |
| MvaI | CCWGG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 134 |
| NcoI | CCATGG | 1 cut(s) | 167 |
| NlaIII | CATG | 1 cut(s) | 171 |
| PaeR7I | CTCGAG | 1 cut(s) | 71 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 78, 84 |
| PdmI | GAANNNNTTC | 1 cut(s) | 240 |
| PfeI | GAWTC | 2 cut(s) | 5, 98 |
| Psp6I | CCWGG | 1 cut(s) | 12 |
| PspGI | CCWGG | 1 cut(s) | 12 |
| PspXI | VCTCGAGB | 1 cut(s) | 71 |
| RsaI | GTAC | 1 cut(s) | 200 |
| RsaNI | GTAC | 1 cut(s) | 199 |
| SalI | GTCGAC | 1 cut(s) | 77 |
| SaqAI | TTAA | 1 cut(s) | 180 |
| ScaI | AGTACT | 1 cut(s) | 200 |
| ScrFI | CCNGG | 1 cut(s) | 14 |
| SetI | ASST | 4 cut(s) | 78, 96, 111, 139 |
| Sfr274I | CTCGAG | 1 cut(s) | 71 |
| SlaI | CTCGAG | 1 cut(s) | 71 |
| SmlI | CTYRAG | 1 cut(s) | 71 |
| SmoI | CTYRAG | 1 cut(s) | 71 |
| Sse9I | AATT | 1 cut(s) | 181 |
| SsiI | CCGC | 1 cut(s) | 61 |
| SspMI | CTAG | 1 cut(s) | 138 |
| StyD4I | CCNGG | 1 cut(s) | 12 |
| StyI | CCWWGG | 1 cut(s) | 167 |
| TaaI | ACNGT | 1 cut(s) | 203 |
| TaqI | TCGA | 3 cut(s) | 72, 78, 101 |
| TasI | AATT | 1 cut(s) | 181 |
| TatI | WGTACW | 1 cut(s) | 198 |
| TfiI | GAWTC | 2 cut(s) | 5, 98 |
| Tru1I | TTAA | 1 cut(s) | 180 |
| Tru9I | TTAA | 1 cut(s) | 180 |
| XhoI | CTCGAG | 1 cut(s) | 71 |
| XmiI | GTMKAC | 1 cut(s) | 78 |
| XmnI | GAANNNNTTC | 1 cut(s) | 240 |
| XspI | CTAG | 1 cut(s) | 138 |
| ZrmI | AGTACT | 1 cut(s) | 200 |