Splicing factor 3B subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0131751 RchiOBHm_Chr3g0476491 RchiOBHm_Chr5g0047881 RchiOBHm_Chr5g0067151 RchiOBHm_Chr7g0239741 RchiOBHm_Chr7g0239751 RchiOBHm_Chr7g0239811 RchiOBHm_Chr7g0240001 |
| rosa_laevigata | RLG00000017465 RLG00000029281 RLG00000036286 |
| rosa_multiflora | Rmu_sc0000389.1_g000043 Rmu_sc0000498.1_g000011 Rmu_sc0007193.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00059850 Rroxscaffold_2G00120160 Rroxscaffold_3G00230140 |
| rosa_rugosa | Rorug01G0042500 Rorug04G0302000 |
| rosa_samantha | Rh1AG075400 Rh1AG171100 Rh1BG070500 Rh1CG245100 Rh2AG507000 Rh2CG297600 Rh4BG005100 Rh4CG110500 Rh4CG199600 Rh4DG067400 Rh4DG185200 Rh5AG442100 Rh5BG324900 Rh5BG459100 Rh5CG481300 Rh5DG191400 Rh5DG204200 Rh5DG474100 Rh6AG039800 Rh7AG211400 Rh7BG184600 Rh7CG153700 Rh7CG246700 Rh7DG321300 |
| rosa_wichuraiana | Rw1G018320 Rw4G029660 Rw5G041310 Rw7G040450 Rw7G040500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 167 |
| AccII | CGCG | 1 cut(s) | 14 |
| AciI | CCGC | 1 cut(s) | 12 |
| AclWI | GGATC | 1 cut(s) | 95 |
| AcsI | RAATTY | 1 cut(s) | 136 |
| AfaI | GTAC | 1 cut(s) | 131 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 51 |
| AgsI | TTSAA | 3 cut(s) | 65, 124, 152 |
| AluBI | AGCT | 1 cut(s) | 98 |
| AluI | AGCT | 1 cut(s) | 98 |
| AlwI | GGATC | 1 cut(s) | 95 |
| ApeKI | GCWGC | 1 cut(s) | 95 |
| ApoI | RAATTY | 1 cut(s) | 136 |
| BbvI | GCAGC | 1 cut(s) | 107 |
| BfmI | CTRYAG | 1 cut(s) | 93 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| BmsI | GCATC | 1 cut(s) | 76 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 51 |
| BseGI | GGATG | 2 cut(s) | 21, 91 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 51 |
| BseRI | GAGGAG | 2 cut(s) | 18, 21 |
| BseXI | GCAGC | 1 cut(s) | 107 |
| Bsh1236I | CGCG | 1 cut(s) | 14 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 51 |
| BsmI | GAATGC | 1 cut(s) | 165 |
| Bsp143I | GATC | 1 cut(s) | 100 |
| BspACI | CCGC | 1 cut(s) | 12 |
| BspFNI | CGCG | 1 cut(s) | 14 |
| BspMAI | CTGCAG | 1 cut(s) | 97 |
| BspPI | GGATC | 1 cut(s) | 95 |
| BssMI | GATC | 1 cut(s) | 100 |
| BstF5I | GGATG | 2 cut(s) | 21, 91 |
| BstFNI | CGCG | 1 cut(s) | 14 |
| BstKTI | GATC | 1 cut(s) | 103 |
| BstMBI | GATC | 1 cut(s) | 100 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 95 |
| BstSFI | CTRYAG | 1 cut(s) | 93 |
| BstUI | CGCG | 1 cut(s) | 14 |
| BstV1I | GCAGC | 1 cut(s) | 107 |
| BtsCI | GGATG | 2 cut(s) | 21, 91 |
| Csp6I | GTAC | 1 cut(s) | 130 |
| CviJI | RGCY | 1 cut(s) | 98 |
| CviKI_1 | RGCY | 1 cut(s) | 98 |
| CviQI | GTAC | 1 cut(s) | 130 |
| DpnI | GATC | 1 cut(s) | 102 |
| DpnII | GATC | 1 cut(s) | 100 |
| FaiI | YATR | 6 cut(s) | 18, 72, 77, 167, 175, 177 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| FokI | GGATG | 2 cut(s) | 8, 98 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| GluI | GCNGC | 1 cut(s) | 96 |
| HinfI | GANTC | 1 cut(s) | 152 |
| Hpy188III | TCNNGA | 1 cut(s) | 156 |
| HpyAV | CCTTC | 1 cut(s) | 55 |
| HpyCH4IV | ACGT | 1 cut(s) | 39 |
| HpyCH4V | TGCA | 2 cut(s) | 89, 95 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 95 |
| HpySE526I | ACGT | 1 cut(s) | 39 |
| Kzo9I | GATC | 1 cut(s) | 100 |
| LpnPI | CCDG | 3 cut(s) | 98, 118, 141 |
| Lsp1109I | GCAGC | 1 cut(s) | 107 |
| LweI | GCATC | 1 cut(s) | 76 |
| MaeII | ACGT | 1 cut(s) | 39 |
| MalI | GATC | 1 cut(s) | 102 |
| MboI | GATC | 1 cut(s) | 100 |
| MluCI | AATT | 2 cut(s) | 107, 136 |
| MnlI | CCTC | 3 cut(s) | 36, 39, 42 |
| MspA1I | CMGCKG | 1 cut(s) | 98 |
| Mva1269I | GAATGC | 1 cut(s) | 165 |
| MvnI | CGCG | 1 cut(s) | 14 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 95 |
| NdeII | GATC | 1 cut(s) | 100 |
| PctI | GAATGC | 1 cut(s) | 165 |
| PfeI | GAWTC | 1 cut(s) | 152 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| PsiI | TTATAA | 1 cut(s) | 167 |
| PstI | CTGCAG | 1 cut(s) | 97 |
| PvuII | CAGCTG | 1 cut(s) | 98 |
| RsaI | GTAC | 1 cut(s) | 131 |
| RsaNI | GTAC | 1 cut(s) | 130 |
| SatI | GCNGC | 1 cut(s) | 96 |
| Sau3AI | GATC | 1 cut(s) | 100 |
| SetI | ASST | 3 cut(s) | 42, 100, 174 |
| SfaNI | GCATC | 1 cut(s) | 76 |
| SfcI | CTRYAG | 1 cut(s) | 93 |
| SgeI | CNNG | 5 cut(s) | 25, 61, 125, 145, 168 |
| Sse9I | AATT | 2 cut(s) | 107, 136 |
| SsiI | CCGC | 1 cut(s) | 12 |
| SspI | AATATT | 1 cut(s) | 189 |
| TaiI | ACGT | 1 cut(s) | 42 |
| TasI | AATT | 2 cut(s) | 107, 136 |
| TfiI | GAWTC | 1 cut(s) | 152 |
| TseI | GCWGC | 1 cut(s) | 95 |
| XapI | RAATTY | 1 cut(s) | 136 |