Splicing factor 3B subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0131751 RchiOBHm_Chr3g0476491 RchiOBHm_Chr5g0047881 RchiOBHm_Chr5g0067151 RchiOBHm_Chr7g0239741 RchiOBHm_Chr7g0239751 RchiOBHm_Chr7g0239811 RchiOBHm_Chr7g0240001 |
| rosa_laevigata | RLG00000017465 RLG00000029281 RLG00000036286 |
| rosa_multiflora | Rmu_sc0000389.1_g000043 Rmu_sc0000498.1_g000011 Rmu_sc0007193.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00059850 Rroxscaffold_2G00120160 Rroxscaffold_3G00230140 |
| rosa_rugosa | Rorug01G0042500 Rorug04G0302000 |
| rosa_samantha | Rh1AG075400 Rh1AG171100 Rh1BG070500 Rh1CG245100 Rh2AG507000 Rh2CG297600 Rh4BG005100 Rh4CG110500 Rh4CG199600 Rh4DG067400 Rh4DG185200 Rh5AG442100 Rh5BG324900 Rh5BG459100 Rh5CG481300 Rh5DG191400 Rh5DG204200 Rh5DG474100 Rh6AG039800 Rh7AG211400 Rh7BG184600 Rh7CG153700 Rh7CG246700 Rh7DG321300 |
| rosa_wichuraiana | Rw1G018320 Rw4G029660 Rw5G041310 Rw7G040450 Rw7G040500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 39 |
| AclWI | GGATC | 1 cut(s) | 41 |
| AcsI | RAATTY | 1 cut(s) | 82 |
| AcuI | CTGAAG | 1 cut(s) | 156 |
| AfaI | GTAC | 1 cut(s) | 77 |
| AgsI | TTSAA | 4 cut(s) | 13, 70, 98, 124 |
| AluBI | AGCT | 3 cut(s) | 20, 44, 153 |
| AluI | AGCT | 3 cut(s) | 20, 44, 153 |
| AlwI | GGATC | 1 cut(s) | 41 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 212 |
| ApeKI | GCWGC | 2 cut(s) | 41, 113 |
| ApoI | RAATTY | 1 cut(s) | 82 |
| BbvI | GCAGC | 2 cut(s) | 53, 125 |
| BfaI | CTAG | 1 cut(s) | 197 |
| BfmI | CTRYAG | 1 cut(s) | 111 |
| BisI | GCNGC | 2 cut(s) | 42, 114 |
| BlsI | GCNGC | 2 cut(s) | 43, 115 |
| BmsI | GCATC | 2 cut(s) | 22, 137 |
| Bpu10I | CCTNAGC | 1 cut(s) | 21 |
| BpuEI | CTTGAG | 1 cut(s) | 139 |
| Bsa29I | ATCGAT | 1 cut(s) | 106 |
| BseCI | ATCGAT | 1 cut(s) | 106 |
| BseGI | GGATG | 1 cut(s) | 37 |
| BseMII | CTCAG | 1 cut(s) | 35 |
| BseXI | GCAGC | 2 cut(s) | 53, 125 |
| BshVI | ATCGAT | 1 cut(s) | 106 |
| Bsp143I | GATC | 4 cut(s) | 46, 103, 107, 182 |
| BspACI | CCGC | 1 cut(s) | 39 |
| BspCNI | CTCAG | 1 cut(s) | 34 |
| BspDI | ATCGAT | 1 cut(s) | 106 |
| BspMAI | CTGCAG | 1 cut(s) | 115 |
| BspPI | GGATC | 1 cut(s) | 41 |
| BssMI | GATC | 4 cut(s) | 46, 103, 107, 182 |
| BstDEI | CTNAG | 1 cut(s) | 21 |
| BstF5I | GGATG | 1 cut(s) | 37 |
| BstKTI | GATC | 4 cut(s) | 49, 106, 110, 185 |
| BstMBI | GATC | 4 cut(s) | 46, 103, 107, 182 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 41 |
| BstSFI | CTRYAG | 1 cut(s) | 111 |
| BstV1I | GCAGC | 2 cut(s) | 53, 125 |
| Bsu15I | ATCGAT | 1 cut(s) | 106 |
| BsuTUI | ATCGAT | 1 cut(s) | 106 |
| BtsCI | GGATG | 1 cut(s) | 37 |
| BtsI | GCAGTG | 1 cut(s) | 213 |
| BtsIMutI | CAGTG | 1 cut(s) | 213 |
| CaiI | CAGNNNCTG | 1 cut(s) | 212 |
| ClaI | ATCGAT | 1 cut(s) | 106 |
| Csp6I | GTAC | 1 cut(s) | 76 |
| CviJI | RGCY | 3 cut(s) | 20, 44, 153 |
| CviKI_1 | RGCY | 3 cut(s) | 20, 44, 153 |
| CviQI | GTAC | 1 cut(s) | 76 |
| DdeI | CTNAG | 1 cut(s) | 21 |
| DpnI | GATC | 4 cut(s) | 48, 105, 109, 184 |
| DpnII | GATC | 4 cut(s) | 46, 103, 107, 182 |
| Eco57I | CTGAAG | 1 cut(s) | 156 |
| FaiI | YATR | 1 cut(s) | 118 |
| Fnu4HI | GCNGC | 2 cut(s) | 42, 114 |
| FokI | GGATG | 1 cut(s) | 44 |
| Fsp4HI | GCNGC | 2 cut(s) | 42, 114 |
| FspBI | CTAG | 1 cut(s) | 197 |
| GluI | GCNGC | 2 cut(s) | 42, 114 |
| HinfI | GANTC | 1 cut(s) | 98 |
| Hpy188I | TCNGA | 2 cut(s) | 103, 136 |
| Hpy188III | TCNNGA | 2 cut(s) | 13, 156 |
| HpyCH4V | TGCA | 3 cut(s) | 35, 113, 206 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 41 |
| HpyF3I | CTNAG | 1 cut(s) | 21 |
| Kzo9I | GATC | 4 cut(s) | 46, 103, 107, 182 |
| LpnPI | CCDG | 3 cut(s) | 8, 44, 64 |
| Lsp1109I | GCAGC | 2 cut(s) | 53, 125 |
| LweI | GCATC | 2 cut(s) | 22, 137 |
| MaeI | CTAG | 1 cut(s) | 197 |
| MaeIII | GTNAC | 1 cut(s) | 208 |
| MalI | GATC | 4 cut(s) | 48, 105, 109, 184 |
| MboI | GATC | 4 cut(s) | 46, 103, 107, 182 |
| MboII | GAAGA | 1 cut(s) | 123 |
| MluCI | AATT | 3 cut(s) | 53, 82, 186 |
| MspA1I | CMGCKG | 1 cut(s) | 44 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 41 |
| NdeII | GATC | 4 cut(s) | 46, 103, 107, 182 |
| NmuCI | GTSAC | 1 cut(s) | 208 |
| PfeI | GAWTC | 1 cut(s) | 98 |
| PkrI | GCNGC | 2 cut(s) | 43, 115 |
| PstI | CTGCAG | 1 cut(s) | 115 |
| PstNI | CAGNNNCTG | 1 cut(s) | 212 |
| PvuII | CAGCTG | 1 cut(s) | 44 |
| RsaI | GTAC | 1 cut(s) | 77 |
| RsaNI | GTAC | 1 cut(s) | 76 |
| SatI | GCNGC | 2 cut(s) | 42, 114 |
| Sau3AI | GATC | 4 cut(s) | 46, 103, 107, 182 |
| SetI | ASST | 5 cut(s) | 22, 27, 46, 155, 198 |
| SfaNI | GCATC | 2 cut(s) | 22, 137 |
| SfcI | CTRYAG | 1 cut(s) | 111 |
| SmlI | CTYRAG | 1 cut(s) | 154 |
| SmoI | CTYRAG | 1 cut(s) | 154 |
| Sse9I | AATT | 3 cut(s) | 53, 82, 186 |
| SsiI | CCGC | 1 cut(s) | 39 |
| SspMI | CTAG | 1 cut(s) | 197 |
| TaqI | TCGA | 1 cut(s) | 106 |
| TasI | AATT | 3 cut(s) | 53, 82, 186 |
| TfiI | GAWTC | 1 cut(s) | 98 |
| TscAI | CASTG | 1 cut(s) | 213 |
| TseFI | GTSAC | 1 cut(s) | 208 |
| TseI | GCWGC | 2 cut(s) | 41, 113 |
| Tsp45I | GTSAC | 1 cut(s) | 208 |
| TspRI | CASTG | 1 cut(s) | 213 |
| XapI | RAATTY | 1 cut(s) | 82 |
| XspI | CTAG | 1 cut(s) | 197 |