Agamous-like MADS-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0131751 RchiOBHm_Chr3g0476491 RchiOBHm_Chr5g0047881 RchiOBHm_Chr5g0067151 RchiOBHm_Chr7g0239741 RchiOBHm_Chr7g0239751 RchiOBHm_Chr7g0239811 RchiOBHm_Chr7g0240001 |
| rosa_laevigata | RLG00000017465 RLG00000029281 RLG00000036286 |
| rosa_multiflora | Rmu_sc0000389.1_g000043 Rmu_sc0000498.1_g000011 Rmu_sc0007193.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00059850 Rroxscaffold_2G00120160 Rroxscaffold_3G00230140 |
| rosa_rugosa | Rorug01G0042500 Rorug04G0302000 |
| rosa_samantha | Rh1AG075400 Rh1AG171100 Rh1BG070500 Rh1CG245100 Rh2AG507000 Rh2CG297600 Rh4BG005100 Rh4CG110500 Rh4CG199600 Rh4DG067400 Rh4DG185200 Rh5AG442100 Rh5BG324900 Rh5BG459100 Rh5CG481300 Rh5DG191400 Rh5DG204200 Rh5DG474100 Rh6AG039800 Rh7AG211400 Rh7BG184600 Rh7CG153700 Rh7CG246700 Rh7DG321300 |
| rosa_wichuraiana | Rw1G018320 Rw4G029660 Rw5G041310 Rw7G040450 Rw7G040500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 362 |
| AcuI | CTGAAG | 1 cut(s) | 336 |
| AgsI | TTSAA | 2 cut(s) | 283, 504 |
| AjiI | CACGTC | 1 cut(s) | 199 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 521, 553 |
| AluBI | AGCT | 5 cut(s) | 80, 145, 229, 279, 515 |
| AluI | AGCT | 5 cut(s) | 80, 145, 229, 279, 515 |
| Alw26I | GTCTC | 1 cut(s) | 381 |
| AoxI | GGCC | 1 cut(s) | 489 |
| ApeKI | GCWGC | 1 cut(s) | 512 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 452, 484 |
| AspS9I | GGNCC | 1 cut(s) | 522 |
| AsuHPI | GGTGA | 2 cut(s) | 470, 562 |
| AvaII | GGWCC | 1 cut(s) | 522 |
| AxyI | CCTNAGG | 1 cut(s) | 192 |
| BauI | CACGAG | 1 cut(s) | 402 |
| BbsI | GAAGAC | 1 cut(s) | 118 |
| BbvI | GCAGC | 1 cut(s) | 524 |
| BclI | TGATCA | 1 cut(s) | 555 |
| BcoDI | GTCTC | 1 cut(s) | 381 |
| BfaI | CTAG | 3 cut(s) | 270, 299, 568 |
| BisI | GCNGC | 2 cut(s) | 362, 513 |
| BlsI | GCNGC | 2 cut(s) | 363, 514 |
| Bme18I | GGWCC | 1 cut(s) | 522 |
| BmgBI | CACGTC | 1 cut(s) | 199 |
| BmgT120I | GGNCC | 1 cut(s) | 522 |
| BpiI | GAAGAC | 1 cut(s) | 118 |
| Bpu10I | CCTNAGC | 1 cut(s) | 81 |
| BpuEI | CTTGAG | 2 cut(s) | 56, 242 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 365, 395 |
| Bse1I | ACTGG | 2 cut(s) | 142, 159 |
| Bse21I | CCTNAGG | 1 cut(s) | 192 |
| Bse3DI | GCAATG | 1 cut(s) | 265 |
| BseGI | GGATG | 2 cut(s) | 190, 208 |
| BseMI | GCAATG | 1 cut(s) | 265 |
| BseMII | CTCAG | 2 cut(s) | 95, 392 |
| BseNI | ACTGG | 2 cut(s) | 142, 159 |
| BseRI | GAGGAG | 1 cut(s) | 194 |
| BseXI | GCAGC | 1 cut(s) | 524 |
| BshFI | GGCC | 1 cut(s) | 491 |
| BsmAI | GTCTC | 1 cut(s) | 381 |
| BsnI | GGCC | 1 cut(s) | 491 |
| Bsp143I | GATC | 1 cut(s) | 555 |
| BspACI | CCGC | 1 cut(s) | 362 |
| BspANI | GGCC | 1 cut(s) | 491 |
| BspCNI | CTCAG | 2 cut(s) | 94, 391 |
| BsrDI | GCAATG | 1 cut(s) | 265 |
| BsrI | ACTGG | 2 cut(s) | 142, 159 |
| BssMI | GATC | 1 cut(s) | 555 |
| BssSI | CACGAG | 1 cut(s) | 402 |
| Bst2BI | CACGAG | 1 cut(s) | 402 |
| Bst4CI | ACNGT | 1 cut(s) | 443 |
| BstC8I | GCNNGC | 2 cut(s) | 60, 143 |
| BstDEI | CTNAG | 4 cut(s) | 81, 192, 378, 474 |
| BstF5I | GGATG | 2 cut(s) | 190, 208 |
| BstKTI | GATC | 1 cut(s) | 558 |
| BstMAI | GTCTC | 1 cut(s) | 381 |
| BstMBI | GATC | 1 cut(s) | 555 |
| BstV1I | GCAGC | 1 cut(s) | 524 |
| BstV2I | GAAGAC | 1 cut(s) | 118 |
| Bsu36I | CCTNAGG | 1 cut(s) | 192 |
| BsuRI | GGCC | 1 cut(s) | 491 |
| BtgZI | GCGATG | 1 cut(s) | 117 |
| BtrI | CACGTC | 1 cut(s) | 199 |
| BtsCI | GGATG | 2 cut(s) | 190, 208 |
| BtsIMutI | CAGTG | 4 cut(s) | 135, 166, 336, 386 |
| Cac8I | GCNNGC | 2 cut(s) | 60, 143 |
| Cfr13I | GGNCC | 1 cut(s) | 522 |
| CseI | GACGC | 1 cut(s) | 236 |
| CviAII | CATG | 1 cut(s) | 526 |
| CviJI | RGCY | 7 cut(s) | 80, 92, 145, 229, 279, 491, 515 |
| CviKI_1 | RGCY | 7 cut(s) | 80, 92, 145, 229, 279, 491, 515 |
| DdeI | CTNAG | 4 cut(s) | 81, 192, 378, 474 |
| DpnI | GATC | 1 cut(s) | 557 |
| DpnII | GATC | 1 cut(s) | 555 |
| Eco47I | GGWCC | 1 cut(s) | 522 |
| Eco57I | CTGAAG | 1 cut(s) | 336 |
| Eco81I | CCTNAGG | 1 cut(s) | 192 |
| FaeI | CATG | 1 cut(s) | 529 |
| FaiI | YATR | 5 cut(s) | 170, 393, 412, 426, 527 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 204, 236 |
| FatI | CATG | 1 cut(s) | 525 |
| FbaI | TGATCA | 1 cut(s) | 555 |
| Fnu4HI | GCNGC | 2 cut(s) | 362, 513 |
| FokI | GGATG | 2 cut(s) | 197, 215 |
| Fsp4HI | GCNGC | 2 cut(s) | 362, 513 |
| FspBI | CTAG | 3 cut(s) | 270, 299, 568 |
| GluI | GCNGC | 2 cut(s) | 362, 513 |
| HaeIII | GGCC | 1 cut(s) | 491 |
| HgaI | GACGC | 1 cut(s) | 236 |
| Hin1II | CATG | 1 cut(s) | 529 |
| HincII | GTYRAC | 1 cut(s) | 439 |
| HindII | GTYRAC | 1 cut(s) | 439 |
| HindIII | AAGCTT | 1 cut(s) | 143 |
| HinfI | GANTC | 2 cut(s) | 238, 374 |
| HphI | GGTGA | 2 cut(s) | 470, 562 |
| Hpy166II | GTNNAC | 1 cut(s) | 439 |
| Hpy188III | TCNNGA | 3 cut(s) | 73, 83, 402 |
| Hpy8I | GTNNAC | 1 cut(s) | 439 |
| HpyAV | CCTTC | 4 cut(s) | 166, 311, 328, 502 |
| HpyCH4III | ACNGT | 1 cut(s) | 443 |
| HpyCH4IV | ACGT | 1 cut(s) | 198 |
| HpyCH4V | TGCA | 3 cut(s) | 292, 384, 535 |
| HpyF3I | CTNAG | 4 cut(s) | 81, 192, 378, 474 |
| HpySE526I | ACGT | 1 cut(s) | 198 |
| Hsp92II | CATG | 1 cut(s) | 529 |
| Ksp22I | TGATCA | 1 cut(s) | 555 |
| Kzo9I | GATC | 1 cut(s) | 555 |
| LpnPI | CCDG | 7 cut(s) | 48, 68, 123, 150, 172, 461, 505 |
| Lsp1109I | GCAGC | 1 cut(s) | 524 |
| MaeI | CTAG | 3 cut(s) | 270, 299, 568 |
| MaeII | ACGT | 1 cut(s) | 198 |
| MaeIII | GTNAC | 2 cut(s) | 40, 458 |
| MalI | GATC | 1 cut(s) | 557 |
| MboI | GATC | 1 cut(s) | 555 |
| MboII | GAAGA | 3 cut(s) | 25, 118, 364 |
| MfeI | CAATTG | 1 cut(s) | 242 |
| MluCI | AATT | 7 cut(s) | 86, 242, 287, 308, 418, 499, 563 |
| MlyI | GAGTC | 1 cut(s) | 383 |
| MnlI | CCTC | 6 cut(s) | 48, 103, 172, 175, 375, 398 |
| MseI | TTAA | 1 cut(s) | 311 |
| MslI | CAYNNNNRTG | 1 cut(s) | 530 |
| MunI | CAATTG | 1 cut(s) | 242 |
| NdeII | GATC | 1 cut(s) | 555 |
| NlaIII | CATG | 1 cut(s) | 529 |
| NmuCI | GTSAC | 2 cut(s) | 40, 458 |
| PfeI | GAWTC | 1 cut(s) | 238 |
| PkrI | GCNGC | 2 cut(s) | 363, 514 |
| PleI | GAGTC | 1 cut(s) | 382 |
| PpsI | GAGTC | 1 cut(s) | 382 |
| PspPI | GGNCC | 1 cut(s) | 522 |
| RseI | CAYNNNNRTG | 1 cut(s) | 530 |
| SaqAI | TTAA | 1 cut(s) | 311 |
| SatI | GCNGC | 2 cut(s) | 362, 513 |
| Sau3AI | GATC | 1 cut(s) | 555 |
| Sau96I | GGNCC | 1 cut(s) | 522 |
| SchI | GAGTC | 1 cut(s) | 383 |
| SinI | GGWCC | 1 cut(s) | 522 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 530 |
| SmlI | CTYRAG | 2 cut(s) | 71, 221 |
| SmoI | CTYRAG | 2 cut(s) | 71, 221 |
| Sse9I | AATT | 7 cut(s) | 86, 242, 287, 308, 418, 499, 563 |
| SsiI | CCGC | 1 cut(s) | 362 |
| SspMI | CTAG | 3 cut(s) | 270, 299, 568 |
| TaaI | ACNGT | 1 cut(s) | 443 |
| TaiI | ACGT | 1 cut(s) | 201 |
| TasI | AATT | 7 cut(s) | 86, 242, 287, 308, 418, 499, 563 |
| TauI | GCSGC | 1 cut(s) | 364 |
| TfiI | GAWTC | 1 cut(s) | 238 |
| Tru1I | TTAA | 1 cut(s) | 311 |
| Tru9I | TTAA | 1 cut(s) | 311 |
| TscAI | CASTG | 4 cut(s) | 142, 166, 336, 386 |
| TseFI | GTSAC | 2 cut(s) | 40, 458 |
| TseI | GCWGC | 1 cut(s) | 512 |
| Tsp45I | GTSAC | 2 cut(s) | 40, 458 |
| TspDTI | ATGAA | 3 cut(s) | 185, 231, 542 |
| TspRI | CASTG | 4 cut(s) | 142, 166, 336, 386 |
| VpaK11BI | GGWCC | 1 cut(s) | 522 |
| XspI | CTAG | 3 cut(s) | 270, 299, 568 |