Domain of unknown function (DUF4378)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0131751 RchiOBHm_Chr3g0476491 RchiOBHm_Chr5g0047881 RchiOBHm_Chr5g0067151 RchiOBHm_Chr7g0239741 RchiOBHm_Chr7g0239751 RchiOBHm_Chr7g0239811 RchiOBHm_Chr7g0240001 |
| rosa_laevigata | RLG00000017465 RLG00000029281 RLG00000036286 |
| rosa_multiflora | Rmu_sc0000389.1_g000043 Rmu_sc0000498.1_g000011 Rmu_sc0007193.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00059850 Rroxscaffold_2G00120160 Rroxscaffold_3G00230140 |
| rosa_rugosa | Rorug01G0042500 Rorug04G0302000 |
| rosa_samantha | Rh1AG075400 Rh1AG171100 Rh1BG070500 Rh1CG245100 Rh2AG507000 Rh2CG297600 Rh4BG005100 Rh4CG110500 Rh4CG199600 Rh4DG067400 Rh4DG185200 Rh5AG442100 Rh5BG324900 Rh5BG459100 Rh5CG481300 Rh5DG191400 Rh5DG204200 Rh5DG474100 Rh6AG039800 Rh7AG211400 Rh7BG184600 Rh7CG153700 Rh7CG246700 Rh7DG321300 |
| rosa_wichuraiana | Rw1G018320 Rw4G029660 Rw5G041310 Rw7G040450 Rw7G040500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 149, 215, 281 |
| AclWI | GGATC | 1 cut(s) | 370 |
| AfaI | GTAC | 3 cut(s) | 181, 247, 313 |
| AgsI | TTSAA | 2 cut(s) | 441, 482 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 101 |
| AluBI | AGCT | 1 cut(s) | 29 |
| AluI | AGCT | 1 cut(s) | 29 |
| AlwI | GGATC | 1 cut(s) | 370 |
| ApeKI | GCWGC | 4 cut(s) | 5, 212, 278, 461 |
| AspS9I | GGNCC | 1 cut(s) | 385 |
| AvaII | GGWCC | 1 cut(s) | 385 |
| BbsI | GAAGAC | 3 cut(s) | 160, 226, 292 |
| BbvI | GCAGC | 3 cut(s) | 224, 290, 473 |
| BceAI | ACGGC | 1 cut(s) | 395 |
| BciVI | GTATCC | 3 cut(s) | 213, 279, 345 |
| BfuI | GTATCC | 3 cut(s) | 213, 279, 345 |
| BisI | GCNGC | 7 cut(s) | 6, 150, 213, 216, 279, 282, 462 |
| BlsI | GCNGC | 7 cut(s) | 7, 151, 214, 217, 280, 283, 463 |
| Bme18I | GGWCC | 1 cut(s) | 385 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 101 |
| BmgT120I | GGNCC | 1 cut(s) | 385 |
| BmiI | GGNNCC | 1 cut(s) | 387 |
| BmsI | GCATC | 1 cut(s) | 53 |
| BpiI | GAAGAC | 3 cut(s) | 160, 226, 292 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 127, 159 |
| BpmI | CTGGAG | 1 cut(s) | 129 |
| BpuEI | CTTGAG | 1 cut(s) | 365 |
| Bse1I | ACTGG | 1 cut(s) | 115 |
| Bse3DI | GCAATG | 3 cut(s) | 169, 235, 301 |
| BseGI | GGATG | 1 cut(s) | 68 |
| BseMI | GCAATG | 3 cut(s) | 169, 235, 301 |
| BseNI | ACTGG | 1 cut(s) | 115 |
| BseXI | GCAGC | 3 cut(s) | 224, 290, 473 |
| BseYI | CCCAGC | 1 cut(s) | 473 |
| Bsh1285I | CGRYCG | 1 cut(s) | 94 |
| BsiEI | CGRYCG | 1 cut(s) | 94 |
| BsmI | GAATGC | 1 cut(s) | 19 |
| Bsp143I | GATC | 2 cut(s) | 91, 362 |
| BspACI | CCGC | 3 cut(s) | 149, 215, 281 |
| BspLI | GGNNCC | 1 cut(s) | 387 |
| BspPI | GGATC | 1 cut(s) | 370 |
| BsrDI | GCAATG | 3 cut(s) | 169, 235, 301 |
| BsrI | ACTGG | 1 cut(s) | 115 |
| BssMI | GATC | 2 cut(s) | 91, 362 |
| BstF5I | GGATG | 1 cut(s) | 68 |
| BstKTI | GATC | 2 cut(s) | 94, 365 |
| BstMBI | GATC | 2 cut(s) | 91, 362 |
| BstMCI | CGRYCG | 1 cut(s) | 94 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 470 |
| BstNSI | RCATGY | 3 cut(s) | 180, 246, 312 |
| BstV1I | GCAGC | 3 cut(s) | 224, 290, 473 |
| BstV2I | GAAGAC | 3 cut(s) | 160, 226, 292 |
| BsuI | GTATCC | 3 cut(s) | 213, 279, 345 |
| BtsCI | GGATG | 1 cut(s) | 68 |
| BtsIMutI | CAGTG | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 1 cut(s) | 385 |
| Csp6I | GTAC | 3 cut(s) | 180, 246, 312 |
| CviJI | RGCY | 7 cut(s) | 5, 29, 126, 197, 263, 329, 464 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 29, 126, 197, 263, 329, 464 |
| CviQI | GTAC | 3 cut(s) | 180, 246, 312 |
| DpnI | GATC | 2 cut(s) | 93, 364 |
| DpnII | GATC | 2 cut(s) | 91, 362 |
| DriI | GACNNNNNGTC | 1 cut(s) | 101 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 101 |
| Eco47I | GGWCC | 1 cut(s) | 385 |
| EcoO109I | RGGNCCY | 1 cut(s) | 385 |
| EcoT22I | ATGCAT | 4 cut(s) | 68, 178, 244, 310 |
| Fnu4HI | GCNGC | 7 cut(s) | 6, 150, 213, 216, 279, 282, 462 |
| FokI | GGATG | 1 cut(s) | 75 |
| Fsp4HI | GCNGC | 7 cut(s) | 6, 150, 213, 216, 279, 282, 462 |
| GluI | GCNGC | 7 cut(s) | 6, 150, 213, 216, 279, 282, 462 |
| GsaI | CCCAGC | 1 cut(s) | 477 |
| GsuI | CTGGAG | 1 cut(s) | 129 |
| HinfI | GANTC | 3 cut(s) | 139, 437, 482 |
| Hpy188I | TCNGA | 2 cut(s) | 367, 396 |
| Hpy188III | TCNNGA | 1 cut(s) | 489 |
| HpyAV | CCTTC | 1 cut(s) | 415 |
| HpyCH4V | TGCA | 8 cut(s) | 8, 19, 49, 66, 176, 242, 308, 446 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 470 |
| Kzo9I | GATC | 2 cut(s) | 91, 362 |
| LpnPI | CCDG | 4 cut(s) | 54, 96, 159, 459 |
| Lsp1109I | GCAGC | 3 cut(s) | 224, 290, 473 |
| LweI | GCATC | 1 cut(s) | 53 |
| MalI | GATC | 2 cut(s) | 93, 364 |
| MboI | GATC | 2 cut(s) | 91, 362 |
| MboII | GAAGA | 4 cut(s) | 160, 226, 292, 477 |
| MfeI | CAATTG | 1 cut(s) | 441 |
| MluCI | AATT | 2 cut(s) | 390, 441 |
| MnlI | CCTC | 8 cut(s) | 111, 116, 129, 153, 344, 353, 418, 475 |
| Mph1103I | ATGCAT | 4 cut(s) | 68, 178, 244, 310 |
| MspA1I | CMGCKG | 3 cut(s) | 149, 215, 281 |
| MunI | CAATTG | 1 cut(s) | 441 |
| Mva1269I | GAATGC | 1 cut(s) | 19 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 470 |
| NdeII | GATC | 2 cut(s) | 91, 362 |
| NlaIV | GGNNCC | 1 cut(s) | 387 |
| NsiI | ATGCAT | 4 cut(s) | 68, 178, 244, 310 |
| NspI | RCATGY | 3 cut(s) | 180, 246, 312 |
| PctI | GAATGC | 1 cut(s) | 19 |
| PfeI | GAWTC | 3 cut(s) | 139, 437, 482 |
| PkrI | GCNGC | 7 cut(s) | 7, 151, 214, 217, 280, 283, 463 |
| Ple19I | CGATCG | 1 cut(s) | 94 |
| PpuMI | RGGWCCY | 1 cut(s) | 385 |
| Psp5II | RGGWCCY | 1 cut(s) | 385 |
| PspFI | CCCAGC | 1 cut(s) | 473 |
| PspN4I | GGNNCC | 1 cut(s) | 387 |
| PspPI | GGNCC | 1 cut(s) | 385 |
| PspPPI | RGGWCCY | 1 cut(s) | 385 |
| PvuI | CGATCG | 1 cut(s) | 94 |
| RsaI | GTAC | 3 cut(s) | 181, 247, 313 |
| RsaNI | GTAC | 3 cut(s) | 180, 246, 312 |
| SatI | GCNGC | 7 cut(s) | 6, 150, 213, 216, 279, 282, 462 |
| Sau3AI | GATC | 2 cut(s) | 91, 362 |
| Sau96I | GGNCC | 1 cut(s) | 385 |
| SetI | ASST | 2 cut(s) | 31, 429 |
| SfaNI | GCATC | 1 cut(s) | 53 |
| SinI | GGWCC | 1 cut(s) | 385 |
| SmlI | CTYRAG | 1 cut(s) | 380 |
| SmoI | CTYRAG | 1 cut(s) | 380 |
| Sse9I | AATT | 2 cut(s) | 390, 441 |
| SsiI | CCGC | 3 cut(s) | 149, 215, 281 |
| TaqI | TCGA | 2 cut(s) | 90, 94 |
| TaqII | GACCGA | 1 cut(s) | 413 |
| TasI | AATT | 2 cut(s) | 390, 441 |
| TatI | WGTACW | 3 cut(s) | 179, 245, 311 |
| TauI | GCSGC | 3 cut(s) | 152, 218, 284 |
| TfiI | GAWTC | 3 cut(s) | 139, 437, 482 |
| TscAI | CASTG | 1 cut(s) | 115 |
| TseI | GCWGC | 4 cut(s) | 5, 212, 278, 461 |
| TspDTI | ATGAA | 1 cut(s) | 83 |
| TspRI | CASTG | 1 cut(s) | 115 |
| VpaK11BI | GGWCC | 1 cut(s) | 385 |
| XceI | RCATGY | 3 cut(s) | 180, 246, 312 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 107 |
| Zsp2I | ATGCAT | 4 cut(s) | 68, 178, 244, 310 |