Rmu_sc0001123.1_g000024

protein modification by small protein conjugation or removal

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001123.1
Physical Location & Seq
Forward (+)
99530 .. 103487
3958 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001123.1_g000024.1.cds

Sequence Viewer

Length: 1200 bp
atgtccaccgagatgtatttttgtagcaatgtgtttcaaagaaaagatgtatccctcgactctgcagtccaaagcaactggcgcgtgatcagaataacgcacgccatgatgacgggaacctactggggtgatgccactacagacgttggcattcatgatatatgtactctaggggacgaagaaattgttgtcggactccctgaattcctatccgaaaggcaaaagtatacagagaagctggctaaagttcttactgaaatgagagtcccagaatttgagcaaccacctatcattgataaactatttacggcggttgaactggctgacaaccccgactggcctattattgcttgccacctaatggacgtcaccttatttcatcaaatgatcagtgataggtgcacggcctatcaattagagtgttttgagaaagtgagaattgatagtttggaagatattgttagacagcaacaatgtgtcatttgtaaggagagccttgatcactttgagggtttagatgaagggattgatcgtggtcagctgatgattattcgcttgtcctgctcacatctttatcacgaagattgcattgcccaatggcttgcgaatagtcagttctgtcccatatgccgatgctcaatgtcagttgtggaacaggcgatgctgcttgttgaacaggagatgccggttgtggaacaggtgatgtcagttgtggaacaggctattgaagcatcatggcggcatctgcattggcctattctgctcacagcatctgcgggtggtatattaactgctatgctggccgagactaagctgctggctagtaggaaaacagcgaagaatagaactctcccagtacaagcctccaagggagctggctgttacttagacgaagggtttgcaatatattgctacccgaatgagacagccgtgttgaggctcaaggaactagaggtgcaggtgctggaaatttctattaaagaccgcacgattcctgtaaacaactctgctgctaagtactgccagggtgatggttatactagtccgcaaccgccagatttgtccgggacacctttcacttactctcagagtcacaatacatttgtttcggcgagttgcgacctcctggccgtggtgtacaactcatcttacaagttacaacccaggcatccttggtgggtgcagctcagtttgtggtga

Protein Analysis

399

Amino Acids

45.22

Weight (kDa)

4.98

Isoelectric Point (pI)

42.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 949
AasI GACNNNNNNGTC 1 cut(s) 65
AatII GACGTC 1 cut(s) 369
Acc36I ACCTGC 1 cut(s) 949
AccB7I CCANNNNNTGG 1 cut(s) 361
AccI GTMKAC 1 cut(s) 227
AccII CGCG 1 cut(s) 84
AciI CCGC 6 cut(s) 311, 739, 776, 985, 1046, 1052
AcoI YGGCCR 2 cut(s) 801, 1128
AcsI RAATTY 3 cut(s) 203, 272, 969
AcyI GRCGYC 1 cut(s) 366
AfaI GTAC 4 cut(s) 166, 858, 1019, 1139
AfiI CCNNNNNNNGG 3 cut(s) 361, 936, 1132
AgsI TTSAA 4 cut(s) 38, 317, 674, 728
AhlI ACTAGT 1 cut(s) 1040
AjnI CCWGG 3 cut(s) 1023, 1125, 1163
AluBI AGCT 5 cut(s) 238, 541, 814, 875, 1186
AluI AGCT 5 cut(s) 238, 541, 814, 875, 1186
Alw21I GWGCWC 1 cut(s) 404
Alw26I GTCTC 2 cut(s) 800, 917
Alw44I GTGCAC 1 cut(s) 400
AlwNI CAGNNNCTG 2 cut(s) 773, 964
AoxI GGCC 5 cut(s) 338, 405, 752, 801, 1128
ApaLI GTGCAC 1 cut(s) 400
ApeKI GCWGC 4 cut(s) 664, 814, 1010, 1183
ApoI RAATTY 3 cut(s) 203, 272, 969
ArsI GACNNNNNNTTYG 2 cut(s) 881, 913
AspLEI GCGC 1 cut(s) 84
AsuC2I CCSGG 1 cut(s) 1066
AsuHPI GGTGA 4 cut(s) 140, 361, 712, 1040
BaeGI GKGCMC 1 cut(s) 404
Bbv12I GWGCWC 1 cut(s) 404
BbvI GCAGC 4 cut(s) 651, 801, 997, 1195
BccI CCATC 1 cut(s) 1025
BceAI ACGGC 4 cut(s) 324, 420, 914, 1115
BcgI CGANNNNNNTGC 2 cut(s) 881, 915
BciT130I CCWGG 3 cut(s) 1025, 1127, 1165
BciVI GTATCC 1 cut(s) 61
BclI TGATCA 3 cut(s) 87, 387, 499
BcnI CCSGG 1 cut(s) 1066
BcoDI GTCTC 2 cut(s) 800, 917
BcuI ACTAGT 1 cut(s) 1040
BfaI CTAG 4 cut(s) 170, 822, 950, 1041
BfmI CTRYAG 2 cut(s) 63, 138
BfuAI ACCTGC 1 cut(s) 949
BfuI GTATCC 1 cut(s) 61
BisI GCNGC 5 cut(s) 665, 740, 815, 1011, 1184
BlsI GCNGC 5 cut(s) 666, 741, 816, 1012, 1185
BmcAI AGTACT 1 cut(s) 1019
Bme1390I CCNGG 4 cut(s) 1025, 1066, 1127, 1165
BmiI GGNNCC 1 cut(s) 118
BmrFI CCNGG 4 cut(s) 1025, 1066, 1127, 1165
BmrI ACTGGG 2 cut(s) 133, 848
BmsI GCATC 8 cut(s) 121, 623, 651, 672, 740, 751, 779, 1177
BmuI ACTGGG 2 cut(s) 133, 848
BpuEI CTTGAG 1 cut(s) 926
BpuMI CCSGG 1 cut(s) 1066
BsaHI GRCGYC 1 cut(s) 366
BsaJI CCNNGG 5 cut(s) 867, 1024, 1131, 1163, 1172
Bsc4I CCNNNNNNNGG 3 cut(s) 361, 936, 1132
Bse118I RCCGGY 1 cut(s) 685
Bse1I ACTGG 5 cut(s) 83, 128, 324, 341, 854
Bse3DI GCAATG 2 cut(s) 34, 588
BseBI CCWGG 3 cut(s) 1025, 1127, 1165
BseDI CCNNGG 5 cut(s) 867, 1024, 1131, 1163, 1172
BseGI GGATG 1 cut(s) 1168
BseLI CCNNNNNNNGG 3 cut(s) 361, 936, 1132
BseMI GCAATG 2 cut(s) 34, 588
BseMII CTCAG 1 cut(s) 1100
BseNI ACTGG 5 cut(s) 83, 128, 324, 341, 854
BseSI GKGCMC 1 cut(s) 404
BseXI GCAGC 4 cut(s) 651, 801, 997, 1195
BsgI GTGCAG 1 cut(s) 977
Bsh1236I CGCG 1 cut(s) 84
BshFI GGCC 5 cut(s) 340, 407, 754, 803, 1130
BsiHKAI GWGCWC 1 cut(s) 404
BsiSI CCGG 2 cut(s) 686, 1065
BslFI GGGAC 4 cut(s) 188, 251, 606, 1081
BslI CCNNNNNNNGG 3 cut(s) 361, 936, 1132
BsmAI GTCTC 2 cut(s) 800, 917
BsmFI GGGAC 4 cut(s) 188, 251, 606, 1081
BsmI GAATGC 1 cut(s) 150
BsnI GGCC 5 cut(s) 340, 407, 754, 803, 1130
Bsp1286I GDGCHC 1 cut(s) 404
Bsp1407I TGTACA 1 cut(s) 1137
Bsp143I GATC 4 cut(s) 87, 387, 499, 529
BspACI CCGC 6 cut(s) 311, 739, 776, 985, 1046, 1052
BspANI GGCC 5 cut(s) 340, 407, 754, 803, 1130
BspCNI CTCAG 2 cut(s) 1099, 1200
BspFNI CGCG 1 cut(s) 84
BspHI TCATGA 1 cut(s) 154
BspLI GGNNCC 1 cut(s) 118
BspMAI CTGCAG 1 cut(s) 67
BspMI ACCTGC 1 cut(s) 949
BsrDI GCAATG 2 cut(s) 34, 588
BsrFI RCCGGY 1 cut(s) 685
BsrGI TGTACA 1 cut(s) 1137
BsrI ACTGG 5 cut(s) 83, 128, 324, 341, 854
BssAI RCCGGY 1 cut(s) 685
BssECI CCNNGG 5 cut(s) 867, 1024, 1131, 1163, 1172
BssMI GATC 4 cut(s) 87, 387, 499, 529
BssNAI GTATAC 1 cut(s) 228
BssNI GRCGYC 1 cut(s) 366
BssT1I CCWWGG 2 cut(s) 867, 1172
Bst1107I GTATAC 1 cut(s) 228
Bst2UI CCWGG 3 cut(s) 1025, 1127, 1165
BstACI GRCGYC 1 cut(s) 366
BstAUI TGTACA 1 cut(s) 1137
BstC8I GCNNGC 7 cut(s) 102, 240, 352, 603, 801, 819, 877
BstDEI CTNAG 5 cut(s) 810, 886, 1014, 1086, 1187
BstDSI CCRYGG 1 cut(s) 1131
BstF5I GGATG 1 cut(s) 1168
BstFNI CGCG 1 cut(s) 84
BstHHI GCGC 1 cut(s) 84
BstKTI GATC 4 cut(s) 90, 390, 502, 532
BstMAI GTCTC 2 cut(s) 800, 917
BstMBI GATC 4 cut(s) 87, 387, 499, 529
BstMWI GCNNNNNNNGC 6 cut(s) 81, 561, 728, 745, 760, 800
BstNI CCWGG 3 cut(s) 1025, 1127, 1165
BstSCI CCNGG 4 cut(s) 1023, 1064, 1125, 1163
BstSFI CTRYAG 2 cut(s) 63, 138
BstSLI GKGCMC 1 cut(s) 404
BstUI CGCG 1 cut(s) 84
BstV1I GCAGC 4 cut(s) 651, 801, 997, 1195
BstXI CCANNNNNNTGG 1 cut(s) 1031
BstZ17I GTATAC 1 cut(s) 228
BsuI GTATCC 1 cut(s) 61
BsuRI GGCC 5 cut(s) 340, 407, 754, 803, 1130
BtgI CCRYGG 1 cut(s) 1131
BtgZI GCGATG 1 cut(s) 674
BtsCI GGATG 1 cut(s) 1168
BtsIMutI CAGTG 1 cut(s) 397
BveI ACCTGC 1 cut(s) 949
Cac8I GCNNGC 7 cut(s) 102, 240, 352, 603, 801, 819, 877
CaiI CAGNNNCTG 2 cut(s) 773, 964
CciI TCATGA 1 cut(s) 154
CfoI GCGC 1 cut(s) 84
Cfr10I RCCGGY 1 cut(s) 685
Csp6I GTAC 4 cut(s) 165, 857, 1018, 1138
CviAII CATG 3 cut(s) 106, 155, 735
CviQI GTAC 4 cut(s) 165, 857, 1018, 1138
DdeI CTNAG 5 cut(s) 810, 886, 1014, 1086, 1187
DpnI GATC 4 cut(s) 89, 389, 501, 531
DpnII GATC 4 cut(s) 87, 387, 499, 529
DrdI GACNNNNNNGTC 1 cut(s) 65
DseDI GACNNNNNNGTC 1 cut(s) 65
EaeI YGGCCR 2 cut(s) 801, 1128
Eco130I CCWWGG 2 cut(s) 867, 1172
EcoRI GAATTC 1 cut(s) 203
EcoRII CCWGG 3 cut(s) 1023, 1125, 1163
EcoT14I CCWWGG 2 cut(s) 867, 1172
ErhI CCWWGG 2 cut(s) 867, 1172
FaeI CATG 3 cut(s) 109, 158, 738
FaqI GGGAC 4 cut(s) 188, 251, 606, 1081
FatI CATG 3 cut(s) 105, 154, 734
FauI CCCGC 1 cut(s) 769
FauNDI CATATG 1 cut(s) 626
FbaI TGATCA 3 cut(s) 87, 387, 499
FblI GTMKAC 1 cut(s) 227
Fnu4HI GCNGC 5 cut(s) 665, 740, 815, 1011, 1184
FokI GGATG 1 cut(s) 1155
Fsp4HI GCNGC 5 cut(s) 665, 740, 815, 1011, 1184
FspBI CTAG 4 cut(s) 170, 822, 950, 1041
GlaI GCGC 1 cut(s) 83
GluI GCNGC 5 cut(s) 665, 740, 815, 1011, 1184
HaeIII GGCC 5 cut(s) 340, 407, 754, 803, 1130
HapII CCGG 2 cut(s) 686, 1065
HhaI GCGC 1 cut(s) 84
Hin1I GRCGYC 1 cut(s) 366
Hin1II CATG 3 cut(s) 109, 158, 738
Hin6I GCGC 1 cut(s) 82
HinP1I GCGC 1 cut(s) 82
HinfI GANTC 5 cut(s) 59, 195, 264, 991, 1090
HpaII CCGG 2 cut(s) 686, 1065
HphI GGTGA 4 cut(s) 140, 361, 712, 1040
Hpy166II GTNNAC 5 cut(s) 6, 228, 402, 1000, 1138
Hpy188I TCNGA 4 cut(s) 92, 194, 214, 1089
Hpy188III TCNNGA 2 cut(s) 155, 578
Hpy8I GTNNAC 5 cut(s) 6, 228, 402, 1000, 1138
HpyAV CCTTC 2 cut(s) 515, 887
HpyCH4IV ACGT 2 cut(s) 144, 366
HpyCH4V TGCA 7 cut(s) 65, 402, 588, 748, 902, 958, 1183
HpyF10VI GCNNNNNNNGC 6 cut(s) 81, 561, 728, 745, 760, 800
HpyF3I CTNAG 5 cut(s) 810, 886, 1014, 1086, 1187
HpySE526I ACGT 2 cut(s) 144, 366
Hsp92I GRCGYC 1 cut(s) 366
Hsp92II CATG 3 cut(s) 109, 158, 738
HspAI GCGC 1 cut(s) 82
Ksp22I TGATCA 3 cut(s) 87, 387, 499
Kzo9I GATC 4 cut(s) 87, 387, 499, 529
LmnI GCTCC 1 cut(s) 872
Lsp1109I GCAGC 4 cut(s) 651, 801, 997, 1195
LweI GCATC 8 cut(s) 121, 623, 651, 672, 740, 751, 779, 1177
MaeI CTAG 4 cut(s) 170, 822, 950, 1041
MaeII ACGT 2 cut(s) 144, 366
MaeIII GTNAC 4 cut(s) 367, 881, 1091, 1155
MalI GATC 4 cut(s) 89, 389, 501, 531
MboI GATC 4 cut(s) 87, 387, 499, 529
MboII GAAGA 4 cut(s) 191, 464, 593, 850
MhlI GDGCHC 1 cut(s) 404
MluCI AATT 6 cut(s) 183, 203, 272, 413, 438, 969
MlyI GAGTC 4 cut(s) 53, 189, 273, 1099
MmeI TCCRAC 1 cut(s) 172
MnlI CCTC 6 cut(s) 65, 502, 874, 930, 946, 1133
MseI TTAA 2 cut(s) 788, 978
MslI CAYNNNNRTG 1 cut(s) 11
MspA1I CMGCKG 1 cut(s) 541
MspI CCGG 2 cut(s) 686, 1065
MspR9I CCNGG 4 cut(s) 1025, 1066, 1127, 1165
Mva1269I GAATGC 1 cut(s) 150
MvaI CCWGG 3 cut(s) 1025, 1127, 1165
MvnI CGCG 1 cut(s) 84
MwoI GCNNNNNNNGC 6 cut(s) 81, 561, 728, 745, 760, 800
NciI CCSGG 1 cut(s) 1066
NdeI CATATG 1 cut(s) 626
NdeII GATC 4 cut(s) 87, 387, 499, 529
NlaIII CATG 3 cut(s) 109, 158, 738
NlaIV GGNNCC 1 cut(s) 118
NmeAIII GCCGAG 1 cut(s) 829
NmuCI GTSAC 2 cut(s) 367, 1091
PagI TCATGA 1 cut(s) 154
PaqCI CACCTGC 1 cut(s) 949
PctI GAATGC 1 cut(s) 150
PfeI GAWTC 1 cut(s) 991
PflMI CCANNNNNTGG 1 cut(s) 361
PfoI TCCNGGA 1 cut(s) 1064
PkrI GCNGC 5 cut(s) 666, 741, 816, 1012, 1185
PleI GAGTC 4 cut(s) 53, 189, 272, 1098
PpsI GAGTC 4 cut(s) 53, 189, 272, 1098
Psp6I CCWGG 3 cut(s) 1023, 1125, 1163
PspGI CCWGG 3 cut(s) 1023, 1125, 1163
PspN4I GGNNCC 1 cut(s) 118
PstI CTGCAG 1 cut(s) 67
PstNI CAGNNNCTG 2 cut(s) 773, 964
PvuII CAGCTG 1 cut(s) 541
RsaI GTAC 4 cut(s) 166, 858, 1019, 1139
RsaNI GTAC 4 cut(s) 165, 857, 1018, 1138
RseI CAYNNNNRTG 1 cut(s) 11
SaqAI TTAA 2 cut(s) 788, 978
SatI GCNGC 5 cut(s) 665, 740, 815, 1011, 1184
Sau3AI GATC 4 cut(s) 87, 387, 499, 529
ScaI AGTACT 1 cut(s) 1019
SchI GAGTC 4 cut(s) 53, 189, 273, 1099
ScrFI CCNGG 4 cut(s) 1025, 1066, 1127, 1165
SduI GDGCHC 1 cut(s) 404
SfaNI GCATC 8 cut(s) 121, 623, 651, 672, 740, 751, 779, 1177
SfcI CTRYAG 2 cut(s) 63, 138
SmiMI CAYNNNNRTG 1 cut(s) 11
SmlI CTYRAG 1 cut(s) 941
SmoI CTYRAG 1 cut(s) 941
SpeI ACTAGT 1 cut(s) 1040
Sse9I AATT 6 cut(s) 183, 203, 272, 413, 438, 969
SsiI CCGC 6 cut(s) 311, 739, 776, 985, 1046, 1052
SspMI CTAG 4 cut(s) 170, 822, 950, 1041
StyD4I CCNGG 4 cut(s) 1023, 1064, 1125, 1163
StyI CCWWGG 2 cut(s) 867, 1172
TaiI ACGT 2 cut(s) 147, 369
TaqI TCGA 1 cut(s) 57
TasI AATT 6 cut(s) 183, 203, 272, 413, 438, 969
TatI WGTACW 4 cut(s) 164, 856, 1017, 1137
TauI GCSGC 1 cut(s) 742
TfiI GAWTC 1 cut(s) 991
Tru1I TTAA 2 cut(s) 788, 978
Tru9I TTAA 2 cut(s) 788, 978
TscAI CASTG 1 cut(s) 397
TseFI GTSAC 2 cut(s) 367, 1091
TseI GCWGC 4 cut(s) 664, 814, 1010, 1183
Tsp45I GTSAC 2 cut(s) 367, 1091
TspDTI ATGAA 3 cut(s) 143, 368, 534
TspRI CASTG 1 cut(s) 397
Van91I CCANNNNNTGG 1 cut(s) 361
VneI GTGCAC 1 cut(s) 400
XapI RAATTY 3 cut(s) 203, 272, 969
XmiI GTMKAC 1 cut(s) 227
XspI CTAG 4 cut(s) 170, 822, 950, 1041
ZraI GACGTC 1 cut(s) 367
ZrmI AGTACT 1 cut(s) 1019
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.