protein modification by small protein conjugation or removal
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 42 - 80 | 1.7e-12 | Leucine rich repeat N-terminal domain |
| LRR_14 | PF23598 | 106 - 315 | 1.6e-09 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 272 - 328 | 5e-08 | Leucine rich repeat |
| LRR_8 | PF13855 | 345 - 403 | 2.6e-08 | Leucine rich repeat |
| LRR_8 | PF13855 | 368 - 428 | 1.2e-07 | Leucine rich repeat |
| LRR_14 | PF23598 | 725 - 808 | 9e-06 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 769 - 812 | 3.8e-06 | Leucine rich repeat |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 970 |
| Acc36I | ACCTGC | 1 cut(s) | 1082 |
| AccII | CGCG | 1 cut(s) | 2570 |
| AciI | CCGC | 7 cut(s) | 1640, 1823, 2103, 2234, 2519, 2679, 2785 |
| AclWI | GGATC | 2 cut(s) | 1441, 1464 |
| AcoI | YGGCCR | 3 cut(s) | 63, 623, 1945 |
| AcsI | RAATTY | 4 cut(s) | 1759, 2229, 2373, 2445 |
| AcuI | CTGAAG | 1 cut(s) | 647 |
| AfaI | GTAC | 4 cut(s) | 1149, 1752, 1882, 2771 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 482, 1069, 2543 |
| AflII | CTTAAG | 1 cut(s) | 2693 |
| AflIII | ACRYGT | 3 cut(s) | 588, 1626, 2038 |
| AjnI | CCWGG | 4 cut(s) | 60, 518, 2536, 2727 |
| Alw26I | GTCTC | 3 cut(s) | 1034, 1163, 2618 |
| AlwI | GGATC | 2 cut(s) | 1441, 1464 |
| Ama87I | CYCGRG | 2 cut(s) | 1151, 1160 |
| AoxI | GGCC | 5 cut(s) | 63, 160, 623, 1357, 1945 |
| ApaI | GGGCCC | 1 cut(s) | 1361 |
| ApeKI | GCWGC | 3 cut(s) | 213, 801, 948 |
| ApoI | RAATTY | 4 cut(s) | 1759, 2229, 2373, 2445 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 968, 1000 |
| AseI | ATTAAT | 1 cut(s) | 717 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 531 |
| AspA2I | CCTAGG | 1 cut(s) | 2623 |
| AspLEI | GCGC | 1 cut(s) | 1833 |
| AspS9I | GGNCC | 7 cut(s) | 364, 464, 845, 1357, 1358, 2047, 2513 |
| AsuHPI | GGTGA | 1 cut(s) | 329 |
| AvaI | CYCGRG | 2 cut(s) | 1151, 1160 |
| AvaII | GGWCC | 5 cut(s) | 364, 464, 845, 2047, 2513 |
| AvrII | CCTAGG | 1 cut(s) | 2623 |
| AxyI | CCTNAGG | 1 cut(s) | 967 |
| BaeGI | GKGCMC | 1 cut(s) | 1361 |
| BalI | TGGCCA | 2 cut(s) | 625, 1947 |
| BanII | GRGCYC | 1 cut(s) | 1361 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 906, 938 |
| BbsI | GAAGAC | 3 cut(s) | 853, 1548, 1638 |
| BbvI | GCAGC | 3 cut(s) | 200, 813, 960 |
| BccI | CCATC | 8 cut(s) | 857, 1591, 1888, 2287, 2537, 2555, 2603, 2665 |
| BceAI | ACGGC | 1 cut(s) | 50 |
| BciT130I | CCWGG | 4 cut(s) | 62, 520, 2538, 2729 |
| BciVI | GTATCC | 1 cut(s) | 915 |
| BcoDI | GTCTC | 3 cut(s) | 1034, 1163, 2618 |
| BfmI | CTRYAG | 1 cut(s) | 1811 |
| BfrI | CTTAAG | 1 cut(s) | 2693 |
| BfuAI | ACCTGC | 1 cut(s) | 1082 |
| BfuI | GTATCC | 1 cut(s) | 915 |
| BglII | AGATCT | 3 cut(s) | 892, 1189, 1483 |
| BisI | GCNGC | 5 cut(s) | 214, 802, 949, 1640, 2680 |
| BlnI | CCTAGG | 1 cut(s) | 2623 |
| BlsI | GCNGC | 5 cut(s) | 215, 803, 950, 1641, 2681 |
| Bme1390I | CCNGG | 4 cut(s) | 62, 520, 2538, 2729 |
| Bme18I | GGWCC | 5 cut(s) | 364, 464, 845, 2047, 2513 |
| BmeT110I | CYCGRG | 2 cut(s) | 1151, 1160 |
| BmgT120I | GGNCC | 7 cut(s) | 364, 464, 845, 1357, 1358, 2047, 2513 |
| BmiI | GGNNCC | 4 cut(s) | 847, 1359, 1496, 1668 |
| BmrFI | CCNGG | 4 cut(s) | 62, 520, 2538, 2729 |
| BmsI | GCATC | 3 cut(s) | 277, 439, 1722 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1214 |
| BpiI | GAAGAC | 3 cut(s) | 853, 1548, 1638 |
| BpmI | CTGGAG | 4 cut(s) | 131, 1178, 1653, 2559 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1295 |
| BpuEI | CTTGAG | 5 cut(s) | 569, 595, 1058, 1072, 1558 |
| BsaBI | GATNNNNATC | 3 cut(s) | 291, 693, 1308 |
| BsaI | GGTCTC | 2 cut(s) | 1034, 2618 |
| BsaJI | CCNNGG | 4 cut(s) | 1044, 1504, 1903, 2623 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1176, 1206, 1651, 1681 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 482, 1069, 2543 |
| Bse1I | ACTGG | 4 cut(s) | 148, 1063, 1216, 2665 |
| Bse21I | CCTNAGG | 1 cut(s) | 967 |
| Bse8I | GATNNNNATC | 3 cut(s) | 291, 693, 1308 |
| BseBI | CCWGG | 4 cut(s) | 62, 520, 2538, 2729 |
| BseDI | CCNNGG | 4 cut(s) | 1044, 1504, 1903, 2623 |
| BseGI | GGATG | 5 cut(s) | 175, 849, 1344, 1737, 2676 |
| BseJI | GATNNNNATC | 3 cut(s) | 291, 693, 1308 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 482, 1069, 2543 |
| BseMII | CTCAG | 5 cut(s) | 192, 382, 1017, 1286, 1626 |
| BseNI | ACTGG | 4 cut(s) | 148, 1063, 1216, 2665 |
| BseSI | GKGCMC | 1 cut(s) | 1361 |
| BseXI | GCAGC | 3 cut(s) | 200, 813, 960 |
| BseYI | CCCAGC | 3 cut(s) | 1354, 1360, 2647 |
| BsgI | GTGCAG | 3 cut(s) | 1596, 2041, 2661 |
| Bsh1236I | CGCG | 1 cut(s) | 2570 |
| BshFI | GGCC | 5 cut(s) | 65, 162, 625, 1359, 1947 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1151, 1160 |
| BslFI | GGGAC | 1 cut(s) | 831 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 482, 1069, 2543 |
| BsmAI | GTCTC | 3 cut(s) | 1034, 1163, 2618 |
| BsmFI | GGGAC | 1 cut(s) | 831 |
| BsmI | GAATGC | 1 cut(s) | 34 |
| BsnI | GGCC | 5 cut(s) | 65, 162, 625, 1359, 1947 |
| Bso31I | GGTCTC | 2 cut(s) | 1034, 2618 |
| BsoBI | CYCGRG | 2 cut(s) | 1151, 1160 |
| Bsp120I | GGGCCC | 1 cut(s) | 1357 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1361 |
| Bsp1407I | TGTACA | 1 cut(s) | 2769 |
| Bsp143I | GATC | 8 cut(s) | 511, 701, 820, 892, 1189, 1433, 1456, 1483 |
| Bsp19I | CCATGG | 1 cut(s) | 1504 |
| Bsp68I | TCGCGA | 1 cut(s) | 2570 |
| BspACI | CCGC | 7 cut(s) | 1640, 1823, 2103, 2234, 2519, 2679, 2785 |
| BspANI | GGCC | 5 cut(s) | 65, 162, 625, 1359, 1947 |
| BspCNI | CTCAG | 5 cut(s) | 193, 381, 1018, 1287, 1627 |
| BspFNI | CGCG | 1 cut(s) | 2570 |
| BspLI | GGNNCC | 4 cut(s) | 847, 1359, 1496, 1668 |
| BspMI | ACCTGC | 1 cut(s) | 1082 |
| BspPI | GGATC | 2 cut(s) | 1441, 1464 |
| BspQI | GCTCTTC | 1 cut(s) | 147 |
| BspTI | CTTAAG | 1 cut(s) | 2693 |
| BspTNI | GGTCTC | 2 cut(s) | 1034, 2618 |
| BsrGI | TGTACA | 1 cut(s) | 2769 |
| BsrI | ACTGG | 4 cut(s) | 148, 1063, 1216, 2665 |
| BssECI | CCNNGG | 4 cut(s) | 1044, 1504, 1903, 2623 |
| BssMI | GATC | 8 cut(s) | 511, 701, 820, 892, 1189, 1433, 1456, 1483 |
| BssT1I | CCWWGG | 4 cut(s) | 1044, 1504, 1903, 2623 |
| Bst2UI | CCWGG | 4 cut(s) | 62, 520, 2538, 2729 |
| Bst4CI | ACNGT | 5 cut(s) | 1755, 1983, 2129, 2551, 2764 |
| Bst6I | CTCTTC | 3 cut(s) | 147, 280, 738 |
| BstAFI | CTTAAG | 1 cut(s) | 2693 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2387 |
| BstAUI | TGTACA | 1 cut(s) | 2769 |
| BstC8I | GCNNGC | 6 cut(s) | 138, 235, 641, 872, 1665, 2032 |
| BstDSI | CCRYGG | 1 cut(s) | 1504 |
| BstF5I | GGATG | 5 cut(s) | 175, 849, 1344, 1737, 2676 |
| BstFNI | CGCG | 1 cut(s) | 2570 |
| BstHHI | GCGC | 1 cut(s) | 1833 |
| BstKTI | GATC | 8 cut(s) | 514, 704, 823, 895, 1192, 1436, 1459, 1486 |
| BstMAI | GTCTC | 3 cut(s) | 1034, 1163, 2618 |
| BstMBI | GATC | 8 cut(s) | 511, 701, 820, 892, 1189, 1433, 1456, 1483 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1664, 1803, 1914, 2387 |
| BstNI | CCWGG | 4 cut(s) | 62, 520, 2538, 2729 |
| BstNSI | RCATGY | 6 cut(s) | 140, 237, 592, 874, 1630, 2042 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1214 |
| BstSCI | CCNGG | 4 cut(s) | 60, 518, 2536, 2727 |
| BstSFI | CTRYAG | 1 cut(s) | 1811 |
| BstSLI | GKGCMC | 1 cut(s) | 1361 |
| BstUI | CGCG | 1 cut(s) | 2570 |
| BstV1I | GCAGC | 3 cut(s) | 200, 813, 960 |
| BstV2I | GAAGAC | 3 cut(s) | 853, 1548, 1638 |
| BstX2I | RGATCY | 4 cut(s) | 892, 1189, 1456, 1483 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 986, 1505, 1677, 2366 |
| BstYI | RGATCY | 4 cut(s) | 892, 1189, 1456, 1483 |
| Bsu36I | CCTNAGG | 1 cut(s) | 967 |
| BsuI | GTATCC | 1 cut(s) | 915 |
| BsuRI | GGCC | 5 cut(s) | 65, 162, 625, 1359, 1947 |
| BtgI | CCRYGG | 1 cut(s) | 1504 |
| BtsCI | GGATG | 5 cut(s) | 175, 849, 1344, 1737, 2676 |
| BtsI | GCAGTG | 2 cut(s) | 1584, 2649 |
| BtsIMutI | CAGTG | 5 cut(s) | 303, 466, 1584, 2649, 2658 |
| BtuMI | TCGCGA | 1 cut(s) | 2570 |
| BveI | ACCTGC | 1 cut(s) | 1082 |
| Cac8I | GCNNGC | 6 cut(s) | 138, 235, 641, 872, 1665, 2032 |
| CfoI | GCGC | 1 cut(s) | 1833 |
| Cfr13I | GGNCC | 7 cut(s) | 364, 464, 845, 1357, 1358, 2047, 2513 |
| Csp6I | GTAC | 4 cut(s) | 1148, 1751, 1881, 2770 |
| CviQI | GTAC | 4 cut(s) | 1148, 1751, 1881, 2770 |
| DpnI | GATC | 8 cut(s) | 513, 703, 822, 894, 1191, 1435, 1458, 1485 |
| DpnII | GATC | 8 cut(s) | 511, 701, 820, 892, 1189, 1433, 1456, 1483 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 970 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 970 |
| EaeI | YGGCCR | 3 cut(s) | 63, 623, 1945 |
| Eam1104I | CTCTTC | 3 cut(s) | 147, 280, 738 |
| EarI | CTCTTC | 3 cut(s) | 147, 280, 738 |
| Eco130I | CCWWGG | 4 cut(s) | 1044, 1504, 1903, 2623 |
| Eco147I | AGGCCT | 1 cut(s) | 162 |
| Eco24I | GRGCYC | 1 cut(s) | 1361 |
| Eco31I | GGTCTC | 2 cut(s) | 1034, 2618 |
| Eco32I | GATATC | 1 cut(s) | 2364 |
| Eco47I | GGWCC | 5 cut(s) | 364, 464, 845, 2047, 2513 |
| Eco57I | CTGAAG | 1 cut(s) | 647 |
| Eco81I | CCTNAGG | 1 cut(s) | 967 |
| Eco88I | CYCGRG | 2 cut(s) | 1151, 1160 |
| EcoO109I | RGGNCCY | 1 cut(s) | 845 |
| EcoRI | GAATTC | 1 cut(s) | 2445 |
| EcoRII | CCWGG | 4 cut(s) | 60, 518, 2536, 2727 |
| EcoRV | GATATC | 1 cut(s) | 2364 |
| EcoT14I | CCWWGG | 4 cut(s) | 1044, 1504, 1903, 2623 |
| EcoT22I | ATGCAT | 1 cut(s) | 36 |
| EcoT38I | GRGCYC | 1 cut(s) | 1361 |
| ErhI | CCWWGG | 4 cut(s) | 1044, 1504, 1903, 2623 |
| FaqI | GGGAC | 1 cut(s) | 831 |
| Fnu4HI | GCNGC | 5 cut(s) | 214, 802, 949, 1640, 2680 |
| FokI | GGATG | 5 cut(s) | 182, 836, 1351, 1744, 2683 |
| FriOI | GRGCYC | 1 cut(s) | 1361 |
| Fsp4HI | GCNGC | 5 cut(s) | 214, 802, 949, 1640, 2680 |
| GlaI | GCGC | 1 cut(s) | 1832 |
| GluI | GCNGC | 5 cut(s) | 214, 802, 949, 1640, 2680 |
| GsaI | CCCAGC | 3 cut(s) | 1358, 1364, 2651 |
| GsuI | CTGGAG | 4 cut(s) | 131, 1178, 1653, 2559 |
| HaeIII | GGCC | 5 cut(s) | 65, 162, 625, 1359, 1947 |
| HhaI | GCGC | 1 cut(s) | 1833 |
| Hin6I | GCGC | 1 cut(s) | 1831 |
| HinP1I | GCGC | 1 cut(s) | 1831 |
| HincII | GTYRAC | 3 cut(s) | 963, 1527, 1900 |
| HindII | GTYRAC | 3 cut(s) | 963, 1527, 1900 |
| HindIII | AAGCTT | 2 cut(s) | 1534, 2300 |
| HphI | GGTGA | 1 cut(s) | 329 |
| Hpy166II | GTNNAC | 8 cut(s) | 464, 963, 1253, 1527, 1900, 2513, 2687, 2770 |
| Hpy188I | TCNGA | 5 cut(s) | 541, 1239, 1636, 2271, 2723 |
| Hpy8I | GTNNAC | 8 cut(s) | 464, 963, 1253, 1527, 1900, 2513, 2687, 2770 |
| Hpy99I | CGWCG | 1 cut(s) | 1081 |
| HpyAV | CCTTC | 6 cut(s) | 380, 836, 908, 1660, 1875, 2020 |
| HpyCH4III | ACNGT | 5 cut(s) | 1755, 1983, 2129, 2551, 2764 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1664, 1803, 1914, 2387 |
| HspAI | GCGC | 1 cut(s) | 1831 |
| Kzo9I | GATC | 8 cut(s) | 511, 701, 820, 892, 1189, 1433, 1456, 1483 |
| LguI | GCTCTTC | 1 cut(s) | 147 |
| LmnI | GCTCC | 4 cut(s) | 107, 1672, 1714, 2072 |
| Lsp1109I | GCAGC | 3 cut(s) | 200, 813, 960 |
| LweI | GCATC | 3 cut(s) | 277, 439, 1722 |
| MaeIII | GTNAC | 4 cut(s) | 677, 2318, 2421, 2656 |
| MalI | GATC | 8 cut(s) | 513, 703, 822, 894, 1191, 1435, 1458, 1485 |
| MboI | GATC | 8 cut(s) | 511, 701, 820, 892, 1189, 1433, 1456, 1483 |
| MfeI | CAATTG | 2 cut(s) | 425, 980 |
| MflI | RGATCY | 4 cut(s) | 892, 1189, 1456, 1483 |
| MhlI | GDGCHC | 1 cut(s) | 1361 |
| MlsI | TGGCCA | 2 cut(s) | 625, 1947 |
| MluNI | TGGCCA | 2 cut(s) | 625, 1947 |
| MlyI | GAGTC | 5 cut(s) | 182, 430, 965, 995, 1165 |
| MmeI | TCCRAC | 4 cut(s) | 76, 129, 855, 1709 |
| Mox20I | TGGCCA | 2 cut(s) | 625, 1947 |
| Mph1103I | ATGCAT | 1 cut(s) | 36 |
| MroXI | GAANNNNTTC | 1 cut(s) | 531 |
| MscI | TGGCCA | 2 cut(s) | 625, 1947 |
| MslI | CAYNNNNRTG | 1 cut(s) | 869 |
| Msp20I | TGGCCA | 2 cut(s) | 625, 1947 |
| MspA1I | CMGCKG | 2 cut(s) | 1642, 2521 |
| MspCI | CTTAAG | 1 cut(s) | 2693 |
| MspR9I | CCNGG | 4 cut(s) | 62, 520, 2538, 2729 |
| MunI | CAATTG | 2 cut(s) | 425, 980 |
| Mva1269I | GAATGC | 1 cut(s) | 34 |
| MvaI | CCWGG | 4 cut(s) | 62, 520, 2538, 2729 |
| MvnI | CGCG | 1 cut(s) | 2570 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1664, 1803, 1914, 2387 |
| NcoI | CCATGG | 1 cut(s) | 1504 |
| NdeII | GATC | 8 cut(s) | 511, 701, 820, 892, 1189, 1433, 1456, 1483 |
| NlaIV | GGNNCC | 4 cut(s) | 847, 1359, 1496, 1668 |
| NmuCI | GTSAC | 3 cut(s) | 677, 2421, 2656 |
| NruI | TCGCGA | 1 cut(s) | 2570 |
| NsiI | ATGCAT | 1 cut(s) | 36 |
| NspI | RCATGY | 6 cut(s) | 140, 237, 592, 874, 1630, 2042 |
| PaeI | GCATGC | 3 cut(s) | 140, 237, 874 |
| PceI | AGGCCT | 1 cut(s) | 162 |
| PciI | ACATGT | 3 cut(s) | 588, 1626, 2038 |
| PciSI | GCTCTTC | 1 cut(s) | 147 |
| PctI | GAATGC | 1 cut(s) | 34 |
| PdmI | GAANNNNTTC | 1 cut(s) | 531 |
| PfoI | TCCNGGA | 3 cut(s) | 518, 2536, 2727 |
| PkrI | GCNGC | 5 cut(s) | 215, 803, 950, 1641, 2681 |
| PleI | GAGTC | 5 cut(s) | 181, 429, 964, 995, 1164 |
| PpsI | GAGTC | 5 cut(s) | 181, 429, 964, 995, 1164 |
| PpuMI | RGGWCCY | 1 cut(s) | 845 |
| PscI | ACATGT | 3 cut(s) | 588, 1626, 2038 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1214 |
| PshBI | ATTAAT | 1 cut(s) | 717 |
| Psp5II | RGGWCCY | 1 cut(s) | 845 |
| Psp6I | CCWGG | 4 cut(s) | 60, 518, 2536, 2727 |
| PspFI | CCCAGC | 3 cut(s) | 1354, 1360, 2647 |
| PspGI | CCWGG | 4 cut(s) | 60, 518, 2536, 2727 |
| PspN4I | GGNNCC | 4 cut(s) | 847, 1359, 1496, 1668 |
| PspOMI | GGGCCC | 1 cut(s) | 1357 |
| PspPI | GGNCC | 7 cut(s) | 364, 464, 845, 1357, 1358, 2047, 2513 |
| PspPPI | RGGWCCY | 1 cut(s) | 845 |
| PsuI | RGATCY | 4 cut(s) | 892, 1189, 1456, 1483 |
| RruI | TCGCGA | 1 cut(s) | 2570 |
| RsaI | GTAC | 4 cut(s) | 1149, 1752, 1882, 2771 |
| RsaNI | GTAC | 4 cut(s) | 1148, 1751, 1881, 2770 |
| RseI | CAYNNNNRTG | 1 cut(s) | 869 |
| SapI | GCTCTTC | 1 cut(s) | 147 |
| SatI | GCNGC | 5 cut(s) | 214, 802, 949, 1640, 2680 |
| Sau3AI | GATC | 8 cut(s) | 511, 701, 820, 892, 1189, 1433, 1456, 1483 |
| Sau96I | GGNCC | 7 cut(s) | 364, 464, 845, 1357, 1358, 2047, 2513 |
| SchI | GAGTC | 5 cut(s) | 182, 430, 965, 995, 1165 |
| ScrFI | CCNGG | 4 cut(s) | 62, 520, 2538, 2729 |
| SduI | GDGCHC | 1 cut(s) | 1361 |
| SfaNI | GCATC | 3 cut(s) | 277, 439, 1722 |
| SfcI | CTRYAG | 1 cut(s) | 1811 |
| SinI | GGWCC | 5 cut(s) | 364, 464, 845, 2047, 2513 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 869 |
| SmlI | CTYRAG | 6 cut(s) | 548, 574, 1037, 1051, 1537, 2693 |
| SmoI | CTYRAG | 6 cut(s) | 548, 574, 1037, 1051, 1537, 2693 |
| SphI | GCATGC | 3 cut(s) | 140, 237, 874 |
| SseBI | AGGCCT | 1 cut(s) | 162 |
| SsiI | CCGC | 7 cut(s) | 1640, 1823, 2103, 2234, 2519, 2679, 2785 |
| SspI | AATATT | 3 cut(s) | 777, 1479, 2065 |
| StuI | AGGCCT | 1 cut(s) | 162 |
| StyD4I | CCNGG | 4 cut(s) | 60, 518, 2536, 2727 |
| StyI | CCWWGG | 4 cut(s) | 1044, 1504, 1903, 2623 |
| TaaI | ACNGT | 5 cut(s) | 1755, 1983, 2129, 2551, 2764 |
| TaqI | TCGA | 4 cut(s) | 297, 510, 1399, 1548 |
| TatI | WGTACW | 1 cut(s) | 2769 |
| TauI | GCSGC | 2 cut(s) | 1642, 2682 |
| TscAI | CASTG | 5 cut(s) | 310, 466, 1584, 2649, 2665 |
| TseFI | GTSAC | 3 cut(s) | 677, 2421, 2656 |
| TseI | GCWGC | 3 cut(s) | 213, 801, 948 |
| Tsp45I | GTSAC | 3 cut(s) | 677, 2421, 2656 |
| TspDTI | ATGAA | 1 cut(s) | 397 |
| TspGWI | ACGGA | 2 cut(s) | 1270, 1619 |
| TspRI | CASTG | 5 cut(s) | 310, 466, 1584, 2649, 2665 |
| Vha464I | CTTAAG | 1 cut(s) | 2693 |
| VpaK11BI | GGWCC | 5 cut(s) | 364, 464, 845, 2047, 2513 |
| VspI | ATTAAT | 1 cut(s) | 717 |
| XapI | RAATTY | 4 cut(s) | 1759, 2229, 2373, 2445 |
| XbaI | TCTAGA | 2 cut(s) | 598, 2279 |
| XceI | RCATGY | 6 cut(s) | 140, 237, 592, 874, 1630, 2042 |
| XmaJI | CCTAGG | 1 cut(s) | 2623 |
| XmnI | GAANNNNTTC | 1 cut(s) | 531 |
| Zsp2I | ATGCAT | 1 cut(s) | 36 |