Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005264.1

Orthogroup ID

OG0001070

Physical Location & Seq

Genomic Coordinates Reverse (-)

16018 .. 21890

Gene Structure 5873 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005264.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

atggtgaagtcgtacctccgttacgagcaggcggcggtcttcggggtcatttcctccggcgattcaaacatcacctacgacagctccggcaagcaccttcttgctcccgccctcgaaaaggtaggcgtttggcacgtacgacagggcgtttgtaccaaaaccctcaccccttcttccgccaccgccggaaaacccatctctgtcacctccatcgcttcctctcatacttctctgacaattagtggccaccatagtgaaatctggtctatagatagtgatccagaagaaagatatttagtctctgggtctgcagacgcggagcttagattttacacaattaagcatgactcggaagatggccaatccatctctaatgggaatggaactgtaactgcagggagtggagatctaccggttcatactaaatgggaagttttgaagatgtttggtgagttaccacggaaaaacgagggtagagtcgcaactgtgagattcaacaagtccggaaatttgctggcttgtcaggtggcgggaaagacagtagatatattccatgtactggatgaggatgaatccaagcggaaagcaaaacgcaggcttcaccggaagaaagaaaaaaaatctgccaagggggcacctcaggtgttagaaaatggagacacagatcgtgtagttggagaagaaggaaatagtcctgctgttacagtccttgatgtttttaagcttcttcaaactattcgagcaagcaaaaagatatgttccatctcgttctgtccaaacactacaaagagttcgatggctacactagctttgtcattgaacaataatttgttggaattttattctatcgaaagcaatgcaacgaacaaaacactttctgtagagcttcaaggacaccgatctgatgtcagaagtgtagcacttagctcagacaacacactcttgatgtcaactagtcacaatgcagtaaagatttggaatccaagtactggttcctgcctgcgaactattgattccggatatggcatgtgtggttttatcattcctaacagcgagtatgcacttgttggaactaaaagtggaacaatggaaattattaacattggaagtggcacttgcattgaagcagtggaagcacacggtggctctgtcatgtcaattgctgccattcctaatgaaaatggttttgtcacaggaagttcagatcatgatgttaagttttgggaatatgaagttaaacagaagtctgctcaagattccaagcagctagtggtgtcaaatgtaaggactatgaagatgaacgatgatgcccttgtggttgctgtcagccctgatgccaaatatatcttggttgcactattggattgcacagtgaaggtgttctttatggattcacttaagcttttcctttccttgtatggtcataagttgcctgtattatgtatggatacatcatctgatggagacctaatagtgactggatctgctgacaaaaatttgaagatttggggtttagattttggtgattgtcataaatccttatttgctcatgaggacagtgtaacagctgttcgatttgtgcaaaacacacattacatgtttagtgctggaaaggaccgcattgtaaaatattgggatgctgataaatttcagttgcttttaacgcttgagggacaccatgctgaagtttggtgcctcggaattagtaaccgtggggacttcattgtcacgggatctcatgacagatcaatacgtcgctgggatcgcactgaagagccattttttattgaggaagaagaagaaaaaaggcagttggaaatgattgagtctgaacttgacaatatgatagagagcaggtatcaaaaggaagaaatccctgaggtgggagctgtggccttagcagggaagaaatctaaagaaacaattacagctgctgatgcaattatcgatgcaatagatatggcagacgcagaattgaagcaacttgcagagcatgaggaggagaaaagcaggggcaatgttgctgactttaaacccaatagtctcatgaatgggctctctccatctgaatatgttcttcgcgcattttcaaatgttcagacaaatgatcttgagcagacgctactggctttaccgttctcagatgctttgaagcttatgtcttacttgaaggactggactttgaatcctgataaggttgaactcgtttgcaagatttctttagttctattgcagacacattttaatcagttggttagtacaccggcagcaagaccaatgttaactgccttgaaagagattctttatcccgaagttaaggaacggaaagacatcattggtttcaaccttgcaggtttggaacatcttaagcaactaatggctttgagatcagatgcattatttcaagatgcaaaatcaaagttgcaggtaatacgtgcacagcattccaagcgcctagatgcaaggacaggcacaggcagagaagaaaatcaaagtaagaagagaaagacaaaaaacaataaattgaatgatggtcacgcttgggtatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0012505 GO:0016020 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp12 WD40

Protein Analysis

849

Amino Acids

93.84

Weight (kDa)

6.24

Isoelectric Point (pI)

41.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001070)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21540
fragaria_vesca	FvH4_6g16900 FvH4_6g16900 FvH4_6g16900 FvH4_6g16900 FvH4_6g16900
malus_domestica	MD12G1106200.v1.1
prunus_persica	Prupe.7G125100_v2.0.a1
pyrus_communis	pycom12g10640
rosa_chinensis	RchiOBHm_Chr3g0470921 RchiOBHm_Chr7g0191891 RchiOBHm_Chr7g0191911 RchiOBHm_Chr7g0224541
rosa_laevigata	RLG00000001887 RLG00000004419 RLG00000004420 RLG00000017852 RLG00000024233
rosa_multiflora	Rmu_co8045794.1_g000001 Rmu_co8107512.1_g000001 Rmu_co8259631.1_g000001 Rmu_co8279299.1_g000001 Rmu_co8395733.1_g000001 Rmu_sc0003361.1_g000007 Rmu_sc0003527.1_g000004 Rmu_sc0005264.1_g000005 Rmu_sc0023809.1_g000001 Rmu_sc0037201.1_g000001 Rmu_sc0037202.1_g000001 Rmu_sc0038402.1_g000001 Rmu_sc0038402.1_g000003 Rmu_sc0039860.1_g000001 Rmu_ssc0000421.1_g000010
rosa_roxburghii	Rroxscaffold_3G00234650 Rroxscaffold_3G00263480 Rroxscaffold_3G00263490 Rroxscaffold_6G00410410
rosa_rugosa	Rorug03G0113900 Rorug06G0511700 Rorug06G0511700 Rorug07G0172700 Rorug07G0172800 Rorug07G0182600
rosa_samantha	Rh2CG630200 Rh2DG680600 Rh3AG163600 Rh3BG189100 Rh3CG179100 Rh3DG187100 Rh5AG328900 Rh7AG121800 Rh7AG378900 Rh7BG123300 Rh7BG123400 Rh7CG398600 Rh7DG124900 Rh7DG369600
rosa_wichuraiana	Rw3G015400 Rw7G010370 Rw7G031220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1724
Acc36I	ACCTGC	3 cut(s)	1845, 2342, 2416
AccB1I	GGYRCC	2 cut(s)	634, 1692
AccB7I	CCANNNNNTGG	2 cut(s)	559, 989
AccII	CGCG	2 cut(s)	317, 2082
AccIII	TCCGGA	2 cut(s)	503, 1016
AciI	CCGC	9 cut(s)	32, 35, 108, 177, 183, 317, 530, 580, 1618
AclWI	GGATC	4 cut(s)	272, 1489, 1741, 1770
AcoI	YGGCCR	2 cut(s)	244, 358
AcsI	RAATTY	4 cut(s)	508, 836, 1495, 1646
AcuI	CTGAAG	2 cut(s)	1704, 1791
AdeI	CACNNNGTG	1 cut(s)	1142
AfaI	GTAC	6 cut(s)	14, 138, 154, 558, 988, 2260
AfiI	CCNNNNNNNGG	6 cut(s)	118, 559, 989, 1882, 1883, 1902
AflII	CTTAAG	2 cut(s)	1397, 2366
AflIII	ACRYGT	1 cut(s)	1596
AgeI	ACCGGT	1 cut(s)	412
AhlI	ACTAGT	1 cut(s)	953
AjuI	GAANNNNNNNTTGG	2 cut(s)	976, 1008
AleI	CACNNNNGTG	1 cut(s)	252
Alw21I	GWGCWC	1 cut(s)	2440
Alw26I	GTCTC	4 cut(s)	304, 651, 1458, 2048
Alw44I	GTGCAC	1 cut(s)	2436
AlwI	GGATC	4 cut(s)	272, 1489, 1741, 1770
AlwNI	CAGNNNCTG	1 cut(s)	1934
Aor13HI	TCCGGA	2 cut(s)	503, 1016
AoxI	GGCC	3 cut(s)	244, 358, 1893
ApaLI	GTGCAC	1 cut(s)	2436
ApeKI	GCWGC	4 cut(s)	1163, 1264, 1931, 2267
ApoI	RAATTY	4 cut(s)	508, 836, 1495, 1646
ArsI	GACNNNNNNTTYG	2 cut(s)	132, 164
AsiGI	ACCGGT	1 cut(s)	412
Asp700I	GAANNNNTTC	2 cut(s)	1379, 2073
AspLEI	GCGC	2 cut(s)	2084, 2454
AspS9I	GGNCC	1 cut(s)	1615
AsuHPI	GGTGA	7 cut(s)	16, 64, 157, 196, 461, 593, 1535
AvaII	GGWCC	1 cut(s)	1615
AxyI	CCTNAGG	2 cut(s)	639, 1878
BaeGI	GKGCMC	2 cut(s)	637, 2440
BalI	TGGCCA	2 cut(s)	246, 360
BanI	GGYRCC	2 cut(s)	634, 1692
BanII	GRGCYC	1 cut(s)	2058
BbsI	GAAGAC	1 cut(s)	31
Bbv12I	GWGCWC	1 cut(s)	2440
BbvI	GCAGC	4 cut(s)	1150, 1276, 1918, 2279
BccI	CCATC	9 cut(s)	203, 218, 350, 374, 770, 790, 1454, 2071, 2525
BcgI	CGANNNNNNTGC	2 cut(s)	839, 873
BciVI	GTATCC	1 cut(s)	1441
BcoDI	GTCTC	4 cut(s)	304, 651, 1458, 2048
BcuI	ACTAGT	1 cut(s)	953
BfaI	CTAG	4 cut(s)	806, 954, 1268, 2456
BfmI	CTRYAG	4 cut(s)	267, 309, 393, 879
BfoI	RGCGCY	1 cut(s)	2455
BfrI	CTTAAG	2 cut(s)	1397, 2366
BfuAI	ACCTGC	3 cut(s)	1845, 2342, 2416
BfuI	GTATCC	1 cut(s)	1441
BglI	GCCNNNNNGGC	1 cut(s)	632
BglII	AGATCT	1 cut(s)	406
BisI	GCNGC	5 cut(s)	33, 1164, 1265, 1932, 2268
BlsI	GCNGC	5 cut(s)	34, 1165, 1266, 1933, 2269
BmcAI	AGTACT	1 cut(s)	988
Bme18I	GGWCC	1 cut(s)	1615
BmgT120I	GGNCC	1 cut(s)	1615
BmiI	GGNNCC	3 cut(s)	636, 994, 1694
BmsI	GCATC	9 cut(s)	1297, 1324, 1627, 1927, 1939, 2134, 2383, 2398, 2449
BpiI	GAAGAC	1 cut(s)	31
Bpu10I	CCTNAGC	1 cut(s)	1897
BpuEI	CTTGAG	3 cut(s)	1236, 1688, 2132
Bsa29I	ATCGAT	1 cut(s)	1947
BsaAI	YACGTR	2 cut(s)	136, 2435
BsaBI	GATNNNNATC	1 cut(s)	276
BsaI	GGTCTC	1 cut(s)	1458
BsaJI	CCNNGG	4 cut(s)	458, 627, 1696, 1711
BsaWI	WCCGGW	4 cut(s)	412, 503, 603, 1016
BsaXI	ACNNNNNCTCC	2 cut(s)	68, 98
Bsc4I	CCNNNNNNNGG	6 cut(s)	118, 559, 989, 1882, 1883, 1902
Bse118I	RCCGGY	2 cut(s)	412, 2263
Bse1I	ACTGG	5 cut(s)	564, 994, 1483, 2130, 2180
Bse21I	CCTNAGG	2 cut(s)	639, 1878
Bse3DI	GCAATG	2 cut(s)	862, 2023
Bse8I	GATNNNNATC	1 cut(s)	276
BseAI	TCCGGA	2 cut(s)	503, 1016
BseCI	ATCGAT	1 cut(s)	1947
BseDI	CCNNGG	4 cut(s)	458, 627, 1696, 1711
BseGI	GGATG	3 cut(s)	568, 574, 1642
BseJI	GATNNNNATC	1 cut(s)	276
BseLI	CCNNNNNNNGG	6 cut(s)	118, 559, 989, 1882, 1883, 1902
BseMI	GCAATG	2 cut(s)	862, 2023
BseMII	CTCAG	4 cut(s)	653, 942, 1869, 2154
BseNI	ACTGG	5 cut(s)	564, 994, 1483, 2130, 2180
BseRI	GAGGAG	2 cut(s)	2012, 2015
BseSI	GKGCMC	2 cut(s)	637, 2440
BseXI	GCAGC	4 cut(s)	1150, 1276, 1918, 2279
BseYI	CCCAGC	1 cut(s)	1758
Bsh1236I	CGCG	2 cut(s)	317, 2082
BshFI	GGCC	3 cut(s)	246, 360, 1895
BshNI	GGYRCC	2 cut(s)	634, 1692
BshTI	ACCGGT	1 cut(s)	412
BshVI	ATCGAT	1 cut(s)	1947
BsiHKAI	GWGCWC	1 cut(s)	2440
BsiSI	CCGG	8 cut(s)	57, 87, 186, 413, 504, 604, 1017, 2264
BsiWI	CGTACG	1 cut(s)	136
BslFI	GGGAC	2 cut(s)	1686, 1730
BslI	CCNNNNNNNGG	6 cut(s)	118, 559, 989, 1882, 1883, 1902
BsmAI	GTCTC	4 cut(s)	304, 651, 1458, 2048
BsmFI	GGGAC	2 cut(s)	1686, 1730
BsmI	GAATGC	1 cut(s)	2443
BsnI	GGCC	3 cut(s)	246, 360, 1895
Bso31I	GGTCTC	1 cut(s)	1458
Bsp1286I	GDGCHC	3 cut(s)	637, 2058, 2440
Bsp13I	TCCGGA	2 cut(s)	503, 1016
BspACI	CCGC	9 cut(s)	32, 35, 108, 177, 183, 317, 530, 580, 1618
BspANI	GGCC	3 cut(s)	246, 360, 1895
BspCNI	CTCAG	4 cut(s)	652, 941, 1870, 2153
BspDI	ATCGAT	1 cut(s)	1947
BspEI	TCCGGA	2 cut(s)	503, 1016
BspFNI	CGCG	2 cut(s)	317, 2082
BspHI	TCATGA	4 cut(s)	1207, 1549, 1738, 2046
BspLI	GGNNCC	3 cut(s)	636, 994, 1694
BspMAI	CTGCAG	2 cut(s)	313, 397
BspMI	ACCTGC	3 cut(s)	1845, 2342, 2416
BspPI	GGATC	4 cut(s)	272, 1489, 1741, 1770
BspQI	GCTCTTC	1 cut(s)	1767
BspT107I	GGYRCC	2 cut(s)	634, 1692
BspTI	CTTAAG	2 cut(s)	1397, 2366
BspTNI	GGTCTC	1 cut(s)	1458
BsrDI	GCAATG	2 cut(s)	862, 2023
BsrFI	RCCGGY	2 cut(s)	412, 2263
BsrI	ACTGG	5 cut(s)	564, 994, 1483, 2130, 2180
BssAI	RCCGGY	2 cut(s)	412, 2263
BssECI	CCNNGG	4 cut(s)	458, 627, 1696, 1711
BssT1I	CCWWGG	1 cut(s)	627
Bst4CI	ACNGT	9 cut(s)	388, 487, 541, 706, 1142, 1372, 1559, 1712, 2136
Bst6I	CTCTTC	2 cut(s)	1767, 2495
BstAFI	CTTAAG	2 cut(s)	1397, 2366
BstBAI	YACGTR	2 cut(s)	136, 2435
BstC8I	GCNNGC	6 cut(s)	30, 92, 516, 596, 745, 1001
BstDEI	CTNAG	7 cut(s)	323, 639, 923, 928, 1878, 1897, 2140
BstDSI	CCRYGG	2 cut(s)	458, 1711
BstENI	CCTNNNNNAGG	1 cut(s)	116
BstF5I	GGATG	3 cut(s)	568, 574, 1642
BstFNI	CGCG	2 cut(s)	317, 2082
BstH2I	RGCGCY	1 cut(s)	2455
BstHHI	GCGC	2 cut(s)	2084, 2454
BstMAI	GTCTC	4 cut(s)	304, 651, 1458, 2048
BstMWI	GCNNNNNNNGC	7 cut(s)	632, 806, 1133, 1663, 1764, 1937, 2449
BstNSI	RCATGY	2 cut(s)	1030, 1600
BstSFI	CTRYAG	4 cut(s)	267, 309, 393, 879
BstSLI	GKGCMC	2 cut(s)	637, 2440
BstUI	CGCG	2 cut(s)	317, 2082
BstV1I	GCAGC	4 cut(s)	1150, 1276, 1918, 2279
BstV2I	GAAGAC	1 cut(s)	31
BstX2I	RGATCY	3 cut(s)	406, 1481, 1733
BstYI	RGATCY	3 cut(s)	406, 1481, 1733
Bsu15I	ATCGAT	1 cut(s)	1947
Bsu36I	CCTNAGG	2 cut(s)	639, 1878
BsuI	GTATCC	1 cut(s)	1441
BsuRI	GGCC	3 cut(s)	246, 360, 1895
BsuTUI	ATCGAT	1 cut(s)	1947
BtgI	CCRYGG	2 cut(s)	458, 1711
BtgZI	GCGATG	1 cut(s)	196
BtsCI	GGATG	3 cut(s)	568, 574, 1642
BtsI	GCAGTG	1 cut(s)	1134
BtsIMutI	CAGTG	4 cut(s)	1134, 1377, 1564, 1767
BveI	ACCTGC	3 cut(s)	1845, 2342, 2416
Cac8I	GCNNGC	6 cut(s)	30, 92, 516, 596, 745, 1001
CaiI	CAGNNNCTG	1 cut(s)	1934
CciI	TCATGA	4 cut(s)	1207, 1549, 1738, 2046
CfoI	GCGC	2 cut(s)	2084, 2454
Cfr10I	RCCGGY	2 cut(s)	412, 2263
Cfr13I	GGNCC	1 cut(s)	1615
ClaI	ATCGAT	1 cut(s)	1947
CseI	GACGC	3 cut(s)	323, 1976, 2128
Csp6I	GTAC	6 cut(s)	13, 137, 153, 557, 987, 2259
CspAI	ACCGGT	1 cut(s)	412
CviQI	GTAC	6 cut(s)	13, 137, 153, 557, 987, 2259
DdeI	CTNAG	7 cut(s)	323, 639, 923, 928, 1878, 1897, 2140
DraI	TTTAAA	1 cut(s)	2032
DraIII	CACNNNGTG	1 cut(s)	1142
DrdI	GACNNNNNNGTC	1 cut(s)	1724
DseDI	GACNNNNNNGTC	1 cut(s)	1724
EaeI	YGGCCR	2 cut(s)	244, 358
Eam1104I	CTCTTC	2 cut(s)	1767, 2495
EarI	CTCTTC	2 cut(s)	1767, 2495
EciI	GGCGGA	1 cut(s)	166
Eco130I	CCWWGG	1 cut(s)	627
Eco24I	GRGCYC	1 cut(s)	2058
Eco31I	GGTCTC	1 cut(s)	1458
Eco47I	GGWCC	1 cut(s)	1615
Eco57I	CTGAAG	2 cut(s)	1704, 1791
Eco81I	CCTNAGG	2 cut(s)	639, 1878
EcoNI	CCTNNNNNAGG	1 cut(s)	116
EcoT14I	CCWWGG	1 cut(s)	627
EcoT22I	ATGCAT	1 cut(s)	2398
EcoT38I	GRGCYC	1 cut(s)	2058
ErhI	CCWWGG	1 cut(s)	627
FalI	AAGNNNNNCTT	6 cut(s)	1099, 1131, 1367, 1399, 2286, 2318
FaqI	GGGAC	2 cut(s)	1686, 1730
FauI	CCCGC	2 cut(s)	115, 523
Fnu4HI	GCNGC	5 cut(s)	33, 1164, 1265, 1932, 2268
FokI	GGATG	3 cut(s)	575, 581, 1649
FriOI	GRGCYC	1 cut(s)	2058
Fsp4HI	GCNGC	5 cut(s)	33, 1164, 1265, 1932, 2268
FspBI	CTAG	4 cut(s)	806, 954, 1268, 2456
GlaI	GCGC	2 cut(s)	2083, 2453
GluI	GCNGC	5 cut(s)	33, 1164, 1265, 1932, 2268
GsaI	CCCAGC	1 cut(s)	1762
HaeII	RGCGCY	1 cut(s)	2455
HaeIII	GGCC	3 cut(s)	246, 360, 1895
HapII	CCGG	8 cut(s)	57, 87, 186, 413, 504, 604, 1017, 2264
HgaI	GACGC	3 cut(s)	323, 1976, 2128
HhaI	GCGC	2 cut(s)	2084, 2454
Hin6I	GCGC	2 cut(s)	2082, 2452
HinP1I	GCGC	2 cut(s)	2082, 2452
HincII	GTYRAC	2 cut(s)	951, 2283
HindII	GTYRAC	2 cut(s)	951, 2283
HindIII	AAGCTT	3 cut(s)	722, 1400, 2153
HpaI	GTTAAC	1 cut(s)	2283
HpaII	CCGG	8 cut(s)	57, 87, 186, 413, 504, 604, 1017, 2264
HphI	GGTGA	7 cut(s)	16, 64, 157, 196, 461, 593, 1535
Hpy166II	GTNNAC	4 cut(s)	951, 2261, 2283, 2438
Hpy8I	GTNNAC	4 cut(s)	951, 2261, 2283, 2438
Hpy99I	CGWCG	1 cut(s)	1758
HpyAV	CCTTC	5 cut(s)	107, 180, 677, 1369, 2164
HpyCH4III	ACNGT	9 cut(s)	388, 487, 541, 706, 1142, 1372, 1559, 1712, 2136
HpyCH4IV	ACGT	3 cut(s)	135, 1753, 2434
HpyF10VI	GCNNNNNNNGC	7 cut(s)	632, 806, 1133, 1663, 1764, 1937, 2449
HpyF3I	CTNAG	7 cut(s)	323, 639, 923, 928, 1878, 1897, 2140
HpySE526I	ACGT	3 cut(s)	135, 1753, 2434
HspAI	GCGC	2 cut(s)	2082, 2452
Kpn2I	TCCGGA	2 cut(s)	503, 1016
KspAI	GTTAAC	1 cut(s)	2283
LguI	GCTCTTC	1 cut(s)	1767
LmnI	GCTCC	4 cut(s)	89, 109, 319, 1886
Lsp1109I	GCAGC	4 cut(s)	1150, 1276, 1918, 2279
LweI	GCATC	9 cut(s)	1297, 1324, 1627, 1927, 1939, 2134, 2383, 2398, 2449
MaeI	CTAG	4 cut(s)	806, 954, 1268, 2456
MaeII	ACGT	3 cut(s)	135, 1753, 2434
MfeI	CAATTG	1 cut(s)	1158
MflI	RGATCY	3 cut(s)	406, 1481, 1733
MhlI	GDGCHC	3 cut(s)	637, 2058, 2440
MlsI	TGGCCA	2 cut(s)	246, 360
MluNI	TGGCCA	2 cut(s)	246, 360
MlyI	GAGTC	3 cut(s)	341, 486, 1835
MmeI	TCCRAC	4 cut(s)	655, 813, 1048, 1794
Mox20I	TGGCCA	2 cut(s)	246, 360
Mph1103I	ATGCAT	1 cut(s)	2398
MroI	TCCGGA	2 cut(s)	503, 1016
MroXI	GAANNNNTTC	2 cut(s)	1379, 2073
MscI	TGGCCA	2 cut(s)	246, 360
MslI	CAYNNNNRTG	1 cut(s)	252
Msp20I	TGGCCA	2 cut(s)	246, 360
MspA1I	CMGCKG	2 cut(s)	1568, 1931
MspCI	CTTAAG	2 cut(s)	1397, 2366
MspI	CCGG	8 cut(s)	57, 87, 186, 413, 504, 604, 1017, 2264
MunI	CAATTG	1 cut(s)	1158
Mva1269I	GAATGC	1 cut(s)	2443
MvnI	CGCG	2 cut(s)	317, 2082
MwoI	GCNNNNNNNGC	7 cut(s)	632, 806, 1133, 1663, 1764, 1937, 2449
NlaIV	GGNNCC	3 cut(s)	636, 994, 1694
NmuCI	GTSAC	6 cut(s)	202, 956, 1189, 1474, 1726, 2534
NsiI	ATGCAT	1 cut(s)	2398
NspI	RCATGY	2 cut(s)	1030, 1600
OliI	CACNNNNGTG	1 cut(s)	252
PagI	TCATGA	4 cut(s)	1207, 1549, 1738, 2046
PciI	ACATGT	1 cut(s)	1596
PciSI	GCTCTTC	1 cut(s)	1767
PctI	GAATGC	1 cut(s)	2443
PdmI	GAANNNNTTC	2 cut(s)	1379, 2073
PfeI	GAWTC	9 cut(s)	62, 492, 572, 979, 1013, 1256, 1391, 2185, 2299
Pfl23II	CGTACG	1 cut(s)	136
PflMI	CCANNNNNTGG	2 cut(s)	559, 989
PinAI	ACCGGT	1 cut(s)	412
PkrI	GCNGC	5 cut(s)	34, 1165, 1266, 1933, 2269
PleI	GAGTC	3 cut(s)	341, 485, 1834
PpsI	GAGTC	3 cut(s)	341, 485, 1834
Ppu21I	YACGTR	2 cut(s)	136, 2435
PscI	ACATGT	1 cut(s)	1596
PspFI	CCCAGC	1 cut(s)	1758
PspLI	CGTACG	1 cut(s)	136
PspN4I	GGNNCC	3 cut(s)	636, 994, 1694
PspPI	GGNCC	1 cut(s)	1615
PsrI	GAACNNNNNNTAC	2 cut(s)	1554, 1586
PstI	CTGCAG	2 cut(s)	313, 397
PstNI	CAGNNNCTG	1 cut(s)	1934
PsuI	RGATCY	3 cut(s)	406, 1481, 1733
PvuII	CAGCTG	2 cut(s)	1568, 1931
RsaI	GTAC	6 cut(s)	14, 138, 154, 558, 988, 2260
RsaNI	GTAC	6 cut(s)	13, 137, 153, 557, 987, 2259
RseI	CAYNNNNRTG	1 cut(s)	252
SapI	GCTCTTC	1 cut(s)	1767
SatI	GCNGC	5 cut(s)	33, 1164, 1265, 1932, 2268
Sau96I	GGNCC	1 cut(s)	1615
ScaI	AGTACT	1 cut(s)	988
SchI	GAGTC	3 cut(s)	341, 486, 1835
SduI	GDGCHC	3 cut(s)	637, 2058, 2440
SfaNI	GCATC	9 cut(s)	1297, 1324, 1627, 1927, 1939, 2134, 2383, 2398, 2449
SfcI	CTRYAG	4 cut(s)	267, 309, 393, 879
SinI	GGWCC	1 cut(s)	1615
SmiMI	CAYNNNNRTG	1 cut(s)	252
SmlI	CTYRAG	5 cut(s)	1251, 1397, 1667, 2111, 2366
SmoI	CTYRAG	5 cut(s)	1251, 1397, 1667, 2111, 2366
SpeI	ACTAGT	1 cut(s)	953
SsiI	CCGC	9 cut(s)	32, 35, 108, 177, 183, 317, 530, 580, 1618
SspI	AATATT	1 cut(s)	1631
SspMI	CTAG	4 cut(s)	806, 954, 1268, 2456
StyI	CCWWGG	1 cut(s)	627
TaaI	ACNGT	9 cut(s)	388, 487, 541, 706, 1142, 1372, 1559, 1712, 2136
TaiI	ACGT	3 cut(s)	138, 1756, 2437
TaqI	TCGA	6 cut(s)	114, 739, 794, 849, 1573, 1947
TatI	WGTACW	3 cut(s)	556, 986, 2258
TauI	GCSGC	1 cut(s)	35
TfiI	GAWTC	9 cut(s)	62, 492, 572, 979, 1013, 1256, 1391, 2185, 2299
TscAI	CASTG	4 cut(s)	1134, 1377, 1564, 1774
TseFI	GTSAC	6 cut(s)	202, 956, 1189, 1474, 1726, 2534
TseI	GCWGC	4 cut(s)	1163, 1264, 1931, 2267
Tsp45I	GTSAC	6 cut(s)	202, 956, 1189, 1474, 1726, 2534
TspDTI	ATGAA	8 cut(s)	407, 585, 1191, 1245, 1307, 1313, 1711, 2063
TspGWI	ACGGA	3 cut(s)	8, 475, 2338
TspRI	CASTG	4 cut(s)	1134, 1377, 1564, 1774
Van91I	CCANNNNNTGG	2 cut(s)	559, 989
Vha464I	CTTAAG	2 cut(s)	1397, 2366
VneI	GTGCAC	1 cut(s)	2436
VpaK11BI	GGWCC	1 cut(s)	1615
XagI	CCTNNNNNAGG	1 cut(s)	116
XapI	RAATTY	4 cut(s)	508, 836, 1495, 1646
XceI	RCATGY	2 cut(s)	1030, 1600
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1267, 1345
XmnI	GAANNNNTTC	2 cut(s)	1379, 2073
XspI	CTAG	4 cut(s)	806, 954, 1268, 2456
ZrmI	AGTACT	1 cut(s)	988
Zsp2I	ATGCAT	1 cut(s)	2398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.