Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001070

Physical Location & Seq

Genomic Coordinates Forward (+)

9647777 .. 9651086

Gene Structure 3310 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G010370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGTGAAGTCGTACCTGCGATACGAGCAGGGTGCCGCCTTCGGCGTCATAGTTTGTGGCAATCAAACATTGCCTACGACAGTTCCGGGTAGCACCTTTTTTCCCCGGGCCTGGAAAAGGTGGGCGTCTGGAACGTGCGACAAGGCATTTGCGTCAAAACCCCTAACTCCTTCTGCTGTTGGCATGGATATTCTCCGGGGCCAGTCACCTCCATCGCGACATGGTAGCATTAGAATTTGGGACTCCCTCAATAAAATATGTGAGACCATATTCAACGGTCATATGAGGGCCGAGGGCATCTATCGCCTTCGTGGGCATGGCAATCTGACAATAAGTGACCATCATAGTGAAATTTGGTCCATAGATACCGATCCAGAAAAAAGATGTTTGGTTTCTGGCTCTGCTGACTTGGAACTTAGGTTTTACACAATTAAACATGACCTTGAAGCTTGCCATGAAACAGAAACTGCAAACTGTGGAGATGATAAATGGCAAGTTTTGAAGCTCTTTGCTGGAGAAGAGGGAAAGATGGTCTCCGAAGTCTTTCAACAGTTCCAAACTATTCGACCTGGCAAAAAGATATGTTCCATCTCTTATTGTCCAAACCCTCCCAAGACTTGCCTAGCCACAATAGCCTTCAACAAATCATACACGCGGTATAGACCTCCGGGGGCACCGATCTCTGAGTGTAACGCTTACACACTTATGATGTCAACTAGTCACACTGCAGCAAAGATCTGGAATCCAAGGAATGGTTACTGCCTTGGAACTATTGACACAGGACTCGGCATGTGTGCTTTTATCCTTCCTTGTTGCAATAATAAGTTTGCACTTGTTGGAACCAGGGTTGGAACAATTAGTGGAATTAAGCTCATGGTACGTGGCTCTGTTGAGTCTATTGCAAGAATTCCCAATGAAAATGGTTTTGTCACAGGAAGCTCAGATGGTTATGTCAAGTTCTGGGAATATGAAGTCAAACAAGATTCTAAGCGCCTGCTGGTGTCAAATGTAAGAATGAAGAAGATGGATACTGATGTTCGTGTGGTTTCTGTCAGCCCTGATGCCAAATATCTTTTGGCGGCTTTGGATACCACACTAAAGGTGTTCTATATGGATTCACTCAAACTTTTCCTAACCTTATATGGTCACAGGCTGCCAGTGCTATGTCTGGATGTCTCATCCGACGGAGATCTGATAGTGACTGGATCTGAAGACAAAAATGTGAAGATTTGGAGGCTAGATTTTGGTGACTGCCACAAATCAATGTTTGATCATAAGAGCAGTGTTCAGCGAGTACAATTTGTGCCAAATACCCATTACTTCGTCAGTGTTGGGCAAGATAAGCAAGTAAACTACTTGGTTGCTGATAAATTTGAGTTGCTTTTAGCTATGAAGGGACACCATGAGGGTGTTTGTTGCCTTGCTATTAGTAATTACCATGAACAAGGAAAAAATCCCAGCGGAGGGAGCTGCATGTGGCTTTTGCTGGGAAGAAAACTAAAGAAAACAATTTCTTTGACAGACTCAATTGTTACTAAACTAGAAATAGCATGGGAAGAATCAAAGCGACACACCAATTACGAGGCGGAAAAAGTAAGGCTGTCTCCTCCTGATTATTTTCTGCATGAACTTTTGAAAGTTGAATTCATTACCAGGGTGATTACACTGCTGCAGCAGAAAAGTTGTAATCAGTTGATTTCCACTCCAGCTGCAAAGAAGGATATTATCGGTTACAACCTTGCAGCAATGAATCATATCAAATCAAATGCACCACTTCCAGATGCAATCTCCAAGCGTGGTGTACGTGCAAGTTGGTATGCGAAGACAGAAGAAGGTAAACGTAAAAAAGTTCGAACATGCGAACCGAAGTATGAAATTAGACCTGGTAACGGAGAGGGTTTGTGCAGGTTTTTAATGGAGTGGTTTGGCACGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0012505 GO:0016020 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031090 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp12 WD40

Protein Analysis

644

Amino Acids

72.28

Weight (kDa)

9.02

Isoelectric Point (pI)

34.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR3_2nd	PF25172	234 - 479	3.9e-78	WDR3 second beta-propeller domain
Beta-prop_THOC3	PF25174	295 - 420	5.4e-12	THOC3 beta-propeller domain
WD40_CDC20-Fz	PF24807	295 - 478	2.6e-11	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	296 - 478	2.8e-18	THOC3 beta-propeller domain
WDR90_beta-prop_4th	PF23342	299 - 433	7.8e-06	WDR90, 4th beta-propeller
Beta-prop_EML_2	PF23414	300 - 458	3.2e-12	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_TEP1_2nd	PF25047	306 - 498	1.5e-10	TEP-1 second beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	307 - 457	6.2e-09	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	338 - 478	2e-17	WDR3 first beta-propeller domain
WD40_WDHD1_1st	PF24817	341 - 478	2.9e-12	WDHD1 first WD40 domain
WD40_MABP1-WDR62_2nd	PF24782	341 - 457	3.8e-09	MABP1/WDR62 second WD40 domain
Beta-prop_WDR5	PF25175	343 - 477	5.9e-20	WDR5 beta-propeller domain
Beta-prop_IFT122_1st	PF23381	345 - 445	9e-07	IFT122 first beta-propeller
WD40_Gbeta	PF25391	354 - 483	2.9e-09	G protein beta WD-40 repeat protein
EIF3I	PF24805	360 - 447	4e-09	EIF3I
WD40_Prp19	PF24814	362 - 474	5e-14	Prp19 WD40 domain
NBCH_WD40	PF20426	363 - 474	4.4e-06	Neurobeachin beta propeller domain
Beta-prop_CAF1B_HIR1	PF24105	376 - 453	3.6e-06	CAF1B/HIR1 beta-propeller domain
WD40	PF00400	377 - 411	2.4e-09	WD domain, G-beta repeat
WD40_MABP1-WDR62_1st	PF24780	383 - 452	3.3e-06	MABP1/WDR62 first WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001070)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21540
fragaria_vesca	FvH4_6g16900 FvH4_6g16900 FvH4_6g16900 FvH4_6g16900 FvH4_6g16900
malus_domestica	MD12G1106200.v1.1
prunus_persica	Prupe.7G125100_v2.0.a1
pyrus_communis	pycom12g10640
rosa_chinensis	RchiOBHm_Chr3g0470921 RchiOBHm_Chr7g0191891 RchiOBHm_Chr7g0191911 RchiOBHm_Chr7g0224541
rosa_laevigata	RLG00000001887 RLG00000004419 RLG00000004420 RLG00000017852 RLG00000024233
rosa_multiflora	Rmu_co8045794.1_g000001 Rmu_co8107512.1_g000001 Rmu_co8259631.1_g000001 Rmu_co8279299.1_g000001 Rmu_co8395733.1_g000001 Rmu_sc0003361.1_g000007 Rmu_sc0003527.1_g000004 Rmu_sc0005264.1_g000005 Rmu_sc0023809.1_g000001 Rmu_sc0037201.1_g000001 Rmu_sc0037202.1_g000001 Rmu_sc0038402.1_g000001 Rmu_sc0038402.1_g000003 Rmu_sc0039860.1_g000001 Rmu_ssc0000421.1_g000010
rosa_roxburghii	Rroxscaffold_3G00234650 Rroxscaffold_3G00263480 Rroxscaffold_3G00263490 Rroxscaffold_6G00410410
rosa_rugosa	Rorug03G0113900 Rorug06G0511700 Rorug06G0511700 Rorug07G0172700 Rorug07G0172800 Rorug07G0182600
rosa_samantha	Rh2CG630200 Rh2DG680600 Rh3AG163600 Rh3BG189100 Rh3CG179100 Rh3DG187100 Rh5AG328900 Rh7AG121800 Rh7AG378900 Rh7BG123300 Rh7BG123400 Rh7CG398600 Rh7DG124900 Rh7DG369600
rosa_wichuraiana	Rw3G015400 Rw7G010370 Rw7G031220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	24, 1896
AccB1I	GGYRCC	2 cut(s)	32, 673
AccB7I	CCANNNNNTGG	1 cut(s)	752
AccII	CGCG	2 cut(s)	217, 655
AciI	CCGC	5 cut(s)	36, 655, 1079, 1461, 1586
AclWI	GGATC	2 cut(s)	365, 1213
AcsI	RAATTY	5 cut(s)	234, 351, 906, 1370, 1643
AcuI	CTGAAG	1 cut(s)	1230
AcyI	GRCGYC	2 cut(s)	45, 125
AfaI	GTAC	4 cut(s)	14, 879, 1296, 1803
AfiI	CCNNNNNNNGG	6 cut(s)	111, 117, 752, 1463, 1464, 1889
AgsI	TTSAA	7 cut(s)	274, 446, 502, 548, 640, 1636, 1643
AhlI	ACTAGT	1 cut(s)	716
AjnI	CCWGG	5 cut(s)	110, 568, 842, 1652, 1882
AluBI	AGCT	7 cut(s)	449, 505, 871, 939, 1388, 1470, 1709
AluI	AGCT	7 cut(s)	449, 505, 871, 939, 1388, 1470, 1709
Alw26I	GTCTC	4 cut(s)	257, 538, 1180, 1608
AlwI	GGATC	2 cut(s)	365, 1213
AlwNI	CAGNNNCTG	1 cut(s)	467
Ama87I	CYCGRG	1 cut(s)	105
AoxI	GGCC	3 cut(s)	108, 199, 288
ApeKI	GCWGC	7 cut(s)	728, 1153, 1470, 1669, 1672, 1709, 1742
ApoI	RAATTY	5 cut(s)	234, 351, 906, 1370, 1643
ArsI	GACNNNNNNTTYG	2 cut(s)	131, 163
Asp700I	GAANNNNTTC	1 cut(s)	543
AspLEI	GCGC	1 cut(s)	993
AspS9I	GGNCC	4 cut(s)	108, 199, 288, 357
AsuC2I	CCSGG	5 cut(s)	87, 106, 107, 197, 669
AsuHPI	GGTGA	4 cut(s)	16, 198, 1259, 1669
AsuII	TTCGAA	1 cut(s)	1852
AvaI	CYCGRG	1 cut(s)	105
AvaII	GGWCC	1 cut(s)	357
BaeGI	GKGCMC	1 cut(s)	676
BaeI	ACNNNNGTAYC	2 cut(s)	1020, 1053
BanI	GGYRCC	2 cut(s)	32, 673
BbsI	GAAGAC	2 cut(s)	1218, 1829
BbvI	GCAGC	7 cut(s)	740, 1140, 1457, 1656, 1684, 1696, 1754
BccI	CCATC	6 cut(s)	220, 348, 523, 596, 938, 1018
BcgI	CGANNNNNNTGC	2 cut(s)	14, 48
BciT130I	CCWGG	5 cut(s)	112, 570, 844, 1654, 1884
BciVI	GTATCC	2 cut(s)	1021, 1081
BclI	TGATCA	1 cut(s)	1270
BcnI	CCSGG	5 cut(s)	87, 106, 107, 197, 669
BcoDI	GTCTC	4 cut(s)	257, 538, 1180, 1608
BcuI	ACTAGT	1 cut(s)	716
BfaI	CTAG	4 cut(s)	623, 717, 1238, 1541
BfmI	CTRYAG	2 cut(s)	726, 1670
BfoI	RGCGCY	1 cut(s)	994
BfuAI	ACCTGC	2 cut(s)	24, 1896
BfuI	GTATCC	2 cut(s)	1021, 1081
BglII	AGATCT	2 cut(s)	735, 1189
BisI	GCNGC	9 cut(s)	36, 729, 1080, 1154, 1471, 1670, 1673, 1710, 1743
BlsI	GCNGC	9 cut(s)	37, 730, 1081, 1155, 1472, 1671, 1674, 1711, 1744
Bme18I	GGWCC	1 cut(s)	357
BmeT110I	CYCGRG	1 cut(s)	105
BmgT120I	GGNCC	4 cut(s)	108, 199, 288, 357
BmiI	GGNNCC	4 cut(s)	34, 200, 675, 841
BmsI	GCATC	3 cut(s)	306, 1051, 1771
BpiI	GAAGAC	2 cut(s)	1218, 1829
BpmI	CTGGAG	2 cut(s)	534, 1689
Bpu14I	TTCGAA	1 cut(s)	1852
BpuMI	CCSGG	5 cut(s)	87, 106, 107, 197, 669
BsaAI	YACGTR	3 cut(s)	881, 1805, 1932
BsaBI	GATNNNNATC	1 cut(s)	369
BsaHI	GRCGYC	2 cut(s)	45, 125
BsaI	GGTCTC	2 cut(s)	257, 538
BsaJI	CCNNGG	9 cut(s)	104, 105, 196, 291, 668, 746, 763, 843, 1653
Bsc4I	CCNNNNNNNGG	6 cut(s)	111, 117, 752, 1463, 1464, 1889
Bse1I	ACTGG	3 cut(s)	202, 1157, 1207
Bse3DI	GCAATG	2 cut(s)	68, 1752
Bse8I	GATNNNNATC	1 cut(s)	369
BseBI	CCWGG	5 cut(s)	112, 570, 844, 1654, 1884
BseDI	CCNNGG	9 cut(s)	104, 105, 196, 291, 668, 746, 763, 843, 1653
BseGI	GGATG	2 cut(s)	1177, 1178
BseJI	GATNNNNATC	1 cut(s)	369
BseLI	CCNNNNNNNGG	6 cut(s)	111, 117, 752, 1463, 1464, 1889
BseMI	GCAATG	2 cut(s)	68, 1752
BseMII	CTCAG	2 cut(s)	675, 954
BseNI	ACTGG	3 cut(s)	202, 1157, 1207
BseRI	GAGGAG	1 cut(s)	1596
BseSI	GKGCMC	1 cut(s)	676
BseXI	GCAGC	7 cut(s)	740, 1140, 1457, 1656, 1684, 1696, 1754
BseYI	CCCAGC	2 cut(s)	1457, 1486
BsgI	GTGCAG	1 cut(s)	1924
Bsh1236I	CGCG	2 cut(s)	217, 655
BshFI	GGCC	3 cut(s)	110, 201, 290
BshNI	GGYRCC	2 cut(s)	32, 673
BsiHKCI	CYCGRG	1 cut(s)	105
BsiSI	CCGG	4 cut(s)	86, 106, 196, 668
BslFI	GGGAC	2 cut(s)	254, 1410
BslI	CCNNNNNNNGG	6 cut(s)	111, 117, 752, 1463, 1464, 1889
BsmAI	GTCTC	4 cut(s)	257, 538, 1180, 1608
BsmFI	GGGAC	2 cut(s)	254, 1410
BsnI	GGCC	3 cut(s)	110, 201, 290
Bso31I	GGTCTC	2 cut(s)	257, 538
BsoBI	CYCGRG	1 cut(s)	105
Bsp119I	TTCGAA	1 cut(s)	1852
Bsp1286I	GDGCHC	1 cut(s)	676
Bsp143I	GATC	6 cut(s)	370, 678, 735, 1189, 1205, 1270
Bsp68I	TCGCGA	1 cut(s)	217
BspACI	CCGC	5 cut(s)	36, 655, 1079, 1461, 1586
BspANI	GGCC	3 cut(s)	110, 201, 290
BspCNI	CTCAG	2 cut(s)	676, 953
BspFNI	CGCG	2 cut(s)	217, 655
BspLI	GGNNCC	4 cut(s)	34, 200, 675, 841
BspMAI	CTGCAG	2 cut(s)	730, 1674
BspMI	ACCTGC	2 cut(s)	24, 1896
BspPI	GGATC	2 cut(s)	365, 1213
BspT104I	TTCGAA	1 cut(s)	1852
BspT107I	GGYRCC	2 cut(s)	32, 673
BspTNI	GGTCTC	2 cut(s)	257, 538
BsrDI	GCAATG	2 cut(s)	68, 1752
BsrI	ACTGG	3 cut(s)	202, 1157, 1207
BssECI	CCNNGG	9 cut(s)	104, 105, 196, 291, 668, 746, 763, 843, 1653
BssMI	GATC	6 cut(s)	370, 678, 735, 1189, 1205, 1270
BssNI	GRCGYC	2 cut(s)	45, 125
BssT1I	CCWWGG	2 cut(s)	746, 763
Bst2UI	CCWGG	5 cut(s)	112, 570, 844, 1654, 1884
Bst4CI	ACNGT	4 cut(s)	82, 278, 476, 552
Bst6I	CTCTTC	1 cut(s)	513
BstACI	GRCGYC	2 cut(s)	45, 125
BstBAI	YACGTR	3 cut(s)	881, 1805, 1932
BstBI	TTCGAA	1 cut(s)	1852
BstC8I	GCNNGC	2 cut(s)	451, 995
BstDEI	CTNAG	4 cut(s)	416, 684, 940, 987
BstENI	CCTNNNNNAGG	1 cut(s)	115
BstF5I	GGATG	2 cut(s)	1177, 1178
BstFNI	CGCG	2 cut(s)	217, 655
BstH2I	RGCGCY	1 cut(s)	994
BstHHI	GCGC	1 cut(s)	993
BstKTI	GATC	6 cut(s)	373, 681, 738, 1192, 1208, 1273
BstMAI	GTCTC	4 cut(s)	257, 538, 1180, 1608
BstMBI	GATC	6 cut(s)	370, 678, 735, 1189, 1205, 1270
BstMWI	GCNNNNNNNGC	6 cut(s)	25, 303, 632, 1159, 1342, 1467
BstNI	CCWGG	5 cut(s)	112, 570, 844, 1654, 1884
BstNSI	RCATGY	3 cut(s)	793, 1477, 1860
BstSFI	CTRYAG	2 cut(s)	726, 1670
BstSLI	GKGCMC	1 cut(s)	676
BstUI	CGCG	2 cut(s)	217, 655
BstV1I	GCAGC	7 cut(s)	740, 1140, 1457, 1656, 1684, 1696, 1754
BstV2I	GAAGAC	2 cut(s)	1218, 1829
BstX2I	RGATCY	3 cut(s)	735, 1189, 1205
BstYI	RGATCY	3 cut(s)	735, 1189, 1205
BsuI	GTATCC	2 cut(s)	1021, 1081
BsuRI	GGCC	3 cut(s)	110, 201, 290
BtgZI	GCGATG	1 cut(s)	198
BtsCI	GGATG	2 cut(s)	1177, 1178
BtsI	GCAGTG	3 cut(s)	723, 1288, 1664
BtsIMutI	CAGTG	5 cut(s)	723, 1164, 1288, 1333, 1664
BtuMI	TCGCGA	1 cut(s)	217
BveI	ACCTGC	2 cut(s)	24, 1896
Cac8I	GCNNGC	2 cut(s)	451, 995
CaiI	CAGNNNCTG	1 cut(s)	467
CfoI	GCGC	1 cut(s)	993
Cfr13I	GGNCC	4 cut(s)	108, 199, 288, 357
Cfr9I	CCCGGG	1 cut(s)	105
CseI	GACGC	3 cut(s)	34, 114, 141
CsiI	ACCWGGT	1 cut(s)	1882
Csp6I	GTAC	4 cut(s)	13, 878, 1295, 1802
CviQI	GTAC	4 cut(s)	13, 878, 1295, 1802
DdeI	CTNAG	4 cut(s)	416, 684, 940, 987
DpnI	GATC	6 cut(s)	372, 680, 737, 1191, 1207, 1272
DpnII	GATC	6 cut(s)	370, 678, 735, 1189, 1205, 1270
Eam1104I	CTCTTC	1 cut(s)	513
EarI	CTCTTC	1 cut(s)	513
EciI	GGCGGA	1 cut(s)	1601
Eco130I	CCWWGG	2 cut(s)	746, 763
Eco31I	GGTCTC	2 cut(s)	257, 538
Eco47I	GGWCC	1 cut(s)	357
Eco57I	CTGAAG	1 cut(s)	1230
Eco88I	CYCGRG	1 cut(s)	105
EcoNI	CCTNNNNNAGG	1 cut(s)	115
EcoRI	GAATTC	2 cut(s)	906, 1643
EcoRII	CCWGG	5 cut(s)	110, 568, 842, 1652, 1882
EcoT14I	CCWWGG	2 cut(s)	746, 763
ErhI	CCWWGG	2 cut(s)	746, 763
FaqI	GGGAC	2 cut(s)	254, 1410
FauNDI	CATATG	1 cut(s)	282
FbaI	TGATCA	1 cut(s)	1270
Fnu4HI	GCNGC	9 cut(s)	36, 729, 1080, 1154, 1471, 1670, 1673, 1710, 1743
FokI	GGATG	2 cut(s)	1165, 1184
Fsp4HI	GCNGC	9 cut(s)	36, 729, 1080, 1154, 1471, 1670, 1673, 1710, 1743
FspBI	CTAG	4 cut(s)	623, 717, 1238, 1541
GlaI	GCGC	1 cut(s)	992
GluI	GCNGC	9 cut(s)	36, 729, 1080, 1154, 1471, 1670, 1673, 1710, 1743
GsaI	CCCAGC	2 cut(s)	1461, 1490
GsuI	CTGGAG	2 cut(s)	534, 1689
HaeII	RGCGCY	1 cut(s)	994
HaeIII	GGCC	3 cut(s)	110, 201, 290
HapII	CCGG	4 cut(s)	86, 106, 196, 668
HgaI	GACGC	3 cut(s)	34, 114, 141
HhaI	GCGC	1 cut(s)	993
Hin1I	GRCGYC	2 cut(s)	45, 125
Hin6I	GCGC	1 cut(s)	991
HinP1I	GCGC	1 cut(s)	991
HincII	GTYRAC	1 cut(s)	714
HindII	GTYRAC	1 cut(s)	714
HindIII	AAGCTT	1 cut(s)	447
HinfI	GANTC	9 cut(s)	242, 742, 783, 893, 983, 1115, 1523, 1559, 1750
HpaII	CCGG	4 cut(s)	86, 106, 196, 668
HphI	GGTGA	4 cut(s)	16, 198, 1259, 1669
Hpy166II	GTNNAC	4 cut(s)	714, 1351, 1802, 1838
Hpy188I	TCNGA	7 cut(s)	327, 538, 685, 943, 1183, 1194, 1210
Hpy188III	TCNNGA	7 cut(s)	129, 216, 374, 739, 1169, 1610, 1778
Hpy8I	GTNNAC	4 cut(s)	714, 1351, 1802, 1838
Hpy99I	CGWCG	1 cut(s)	1187
HpyAV	CCTTC	8 cut(s)	49, 180, 317, 646, 815, 1387, 1711, 1826
HpyCH4III	ACNGT	4 cut(s)	82, 278, 476, 552
HpyCH4IV	ACGT	5 cut(s)	134, 880, 1804, 1840, 1931
HpyF10VI	GCNNNNNNNGC	6 cut(s)	25, 303, 632, 1159, 1342, 1467
HpyF3I	CTNAG	4 cut(s)	416, 684, 940, 987
HpySE526I	ACGT	5 cut(s)	134, 880, 1804, 1840, 1931
Hsp92I	GRCGYC	2 cut(s)	45, 125
HspAI	GCGC	1 cut(s)	991
Ksp22I	TGATCA	1 cut(s)	1270
Kzo9I	GATC	6 cut(s)	370, 678, 735, 1189, 1205, 1270
LmnI	GCTCC	1 cut(s)	1467
Lsp1109I	GCAGC	7 cut(s)	740, 1140, 1457, 1656, 1684, 1696, 1754
LweI	GCATC	3 cut(s)	306, 1051, 1771
MabI	ACCWGGT	1 cut(s)	1882
MaeI	CTAG	4 cut(s)	623, 717, 1238, 1541
MaeII	ACGT	5 cut(s)	134, 880, 1804, 1840, 1931
MalI	GATC	6 cut(s)	372, 680, 737, 1191, 1207, 1272
MboI	GATC	6 cut(s)	370, 678, 735, 1189, 1205, 1270
MboII	GAAGA	9 cut(s)	530, 1030, 1033, 1223, 1237, 1503, 1568, 1834, 1841
MfeI	CAATTG	1 cut(s)	1527
MflI	RGATCY	3 cut(s)	735, 1189, 1205
MhlI	GDGCHC	1 cut(s)	676
MlyI	GAGTC	4 cut(s)	236, 777, 902, 1517
MmeI	TCCRAC	3 cut(s)	817, 829, 1206
MroXI	GAANNNNTTC	1 cut(s)	543
MseI	TTAA	3 cut(s)	432, 867, 1913
MslI	CAYNNNNRTG	3 cut(s)	345, 704, 1407
MspA1I	CMGCKG	2 cut(s)	1461, 1709
MspI	CCGG	4 cut(s)	86, 106, 196, 668
MunI	CAATTG	1 cut(s)	1527
MvaI	CCWGG	5 cut(s)	112, 570, 844, 1654, 1884
MvnI	CGCG	2 cut(s)	217, 655
MwoI	GCNNNNNNNGC	6 cut(s)	25, 303, 632, 1159, 1342, 1467
NciI	CCSGG	5 cut(s)	87, 106, 107, 197, 669
NdeI	CATATG	1 cut(s)	282
NdeII	GATC	6 cut(s)	370, 678, 735, 1189, 1205, 1270
NlaIV	GGNNCC	4 cut(s)	34, 200, 675, 841
NmeAIII	GCCGAG	2 cut(s)	316, 765
NmuCI	GTSAC	7 cut(s)	204, 335, 719, 928, 1145, 1198, 1247
NruI	TCGCGA	1 cut(s)	217
NspI	RCATGY	3 cut(s)	793, 1477, 1860
NspV	TTCGAA	1 cut(s)	1852
PdmI	GAANNNNTTC	1 cut(s)	543
PfeI	GAWTC	5 cut(s)	742, 983, 1115, 1559, 1750
PflMI	CCANNNNNTGG	1 cut(s)	752
PkrI	GCNGC	9 cut(s)	37, 730, 1081, 1155, 1472, 1671, 1674, 1711, 1744
PleI	GAGTC	4 cut(s)	236, 777, 901, 1517
PpsI	GAGTC	4 cut(s)	236, 777, 901, 1517
Ppu21I	YACGTR	3 cut(s)	881, 1805, 1932
Psp6I	CCWGG	5 cut(s)	110, 568, 842, 1652, 1882
PspFI	CCCAGC	2 cut(s)	1457, 1486
PspGI	CCWGG	5 cut(s)	110, 568, 842, 1652, 1882
PspN4I	GGNNCC	4 cut(s)	34, 200, 675, 841
PspPI	GGNCC	4 cut(s)	108, 199, 288, 357
PstI	CTGCAG	2 cut(s)	730, 1674
PstNI	CAGNNNCTG	1 cut(s)	467
PsuI	RGATCY	3 cut(s)	735, 1189, 1205
PvuII	CAGCTG	1 cut(s)	1709
RruI	TCGCGA	1 cut(s)	217
RsaI	GTAC	4 cut(s)	14, 879, 1296, 1803
RsaNI	GTAC	4 cut(s)	13, 878, 1295, 1802
RseI	CAYNNNNRTG	3 cut(s)	345, 704, 1407
SaqAI	TTAA	3 cut(s)	432, 867, 1913
SatI	GCNGC	9 cut(s)	36, 729, 1080, 1154, 1471, 1670, 1673, 1710, 1743
Sau3AI	GATC	6 cut(s)	370, 678, 735, 1189, 1205, 1270
Sau96I	GGNCC	4 cut(s)	108, 199, 288, 357
SchI	GAGTC	4 cut(s)	236, 777, 902, 1517
SduI	GDGCHC	1 cut(s)	676
SexAI	ACCWGGT	1 cut(s)	1882
SfaNI	GCATC	3 cut(s)	306, 1051, 1771
SfcI	CTRYAG	2 cut(s)	726, 1670
SfuI	TTCGAA	1 cut(s)	1852
SinI	GGWCC	1 cut(s)	357
SmaI	CCCGGG	1 cut(s)	107
SmiMI	CAYNNNNRTG	3 cut(s)	345, 704, 1407
SpeI	ACTAGT	1 cut(s)	716
SsiI	CCGC	5 cut(s)	36, 655, 1079, 1461, 1586
SspMI	CTAG	4 cut(s)	623, 717, 1238, 1541
StyI	CCWWGG	2 cut(s)	746, 763
TaaI	ACNGT	4 cut(s)	82, 278, 476, 552
TaiI	ACGT	5 cut(s)	137, 883, 1807, 1843, 1934
TaqI	TCGA	2 cut(s)	565, 1852
TatI	WGTACW	1 cut(s)	1294
TauI	GCSGC	2 cut(s)	38, 1082
TfiI	GAWTC	5 cut(s)	742, 983, 1115, 1559, 1750
Tru1I	TTAA	3 cut(s)	432, 867, 1913
Tru9I	TTAA	3 cut(s)	432, 867, 1913
TscAI	CASTG	5 cut(s)	730, 1164, 1288, 1333, 1671
TseFI	GTSAC	7 cut(s)	204, 335, 719, 928, 1145, 1198, 1247
TseI	GCWGC	7 cut(s)	728, 1153, 1470, 1669, 1672, 1709, 1742
Tsp45I	GTSAC	7 cut(s)	204, 335, 719, 928, 1145, 1198, 1247
TspGWI	ACGGA	2 cut(s)	1200, 1905
TspMI	CCCGGG	1 cut(s)	105
TspRI	CASTG	5 cut(s)	730, 1164, 1288, 1333, 1671
Van91I	CCANNNNNTGG	1 cut(s)	752
VpaK11BI	GGWCC	1 cut(s)	357
XagI	CCTNNNNNAGG	1 cut(s)	115
XapI	RAATTY	5 cut(s)	234, 351, 906, 1370, 1643
XceI	RCATGY	3 cut(s)	793, 1477, 1860
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1072
XmaI	CCCGGG	1 cut(s)	105
XmnI	GAANNNNTTC	1 cut(s)	543
XspI	CTAG	4 cut(s)	623, 717, 1238, 1541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.