Rmu_sc0005967.1_g000005

CAAX prenyl protease 1 homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005967.1
Physical Location & Seq
Forward (+)
10799 .. 17583
6785 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005967.1_g000005.1.cds

Sequence Viewer

Length: 1983 bp
atggcgttcccattcttggaagctgttatcggttttatgatattgatgtacaactttgaaacttatttggatttccgccaacatgctgctctgaaacttccaacacttgctaaaactttggaaggagtaatcagccaagaaaagtttgagaagtcgagagcctactgtcttgaaagaagcaacttccattttgttcatgattttgtgaccttacttatggactcaggaattttgttctatcggattttgccttggttttggaagaaatcaggagactttgtagtcttagctggcctcaatgcccaaaatgaaatactacatacccttgcgtttttagctggtgtgatgatttgggaacagatcacagacttaccattctctctgtactccacatttgtcatcgaggctcgtcatggtttcaataaccaaacaatatggttgttcttgaaagacatgttaaaagaaatttgtctttctgttattattgccccacctattgtgtctgcaatcattgtaattgtagagaaaggaggtgcttacttggtcatttatctttgggcgttcatgcttgtcctctctcttgtgatgatgacgatctaccctattctaatagccccactttttaacaagttcacccctcttcctgagggtcagctgagggagaaaattgagaagctcgcttcttccctcgagtttccattgaagaagttgtttgttgttgatggatctataaggtcaagtttcatgatattaatgtacatctttgagacttatctggatacacggcaacattctgctctcaagcttccaacccttcccaaaactttggaaggagtaatcagccaagagaagtttgagaagtcacgagcctacagtcttgaaaagagtcatttccattttgttcatgagtttgtgacaatactgatggattcagcaattttgttctttcgggttttgccttggttttggaagaaatcaggagactttgtggttctagctggcctaaatgccgaaaatgaaatactgcatacacttgcatttttagctggtgtaacgatgtggtcacagatcactgatttgccattttctctctactccacatttgtggttgaggcacgtcatggtttcaataagcaaactatatggttattcttcagagacatgttgaaaggaatttgccttatggctattcttggtccacctattgtgtctgcaattattgtgattgtgcagaaaggaggtgcttacttggccatttatctttggggattcatgtttgtgctctctcttgttatgatgacgatctaccctattctaatagctccactctttaacaagtttacccctcttccagagggtctactcagggagaaaattgagaagctcgcttcttcccttaagtttccattgaagaagttgtttgttgttgatggatctacaaggtcaagccatagcaatgcctatatgtacggattttttaagaacaagagaattgtcctctatgatacattgattcagcagtgcaaaaataatgaggaaattgtagctgttattgctcatgagcttggccattggaagcttaatcacacaatgtattcatttattgcggtgcagatccttacacttctacagtttgggggatatactctagtaagaaattcgaacagtctgtttcaaagttttgggtttgacacccagccagtcatcattggactcatcatatttcagcacaccataatacctgtccagcacctggttagctttgctcttaaccttgtgagccgagcttttgaatttcaggctgatgcttttgctacggagcttggttatgccgcttcacttcgagctggtcttgttcggctacaggaagagaatttgtctgctatgaacactgatccttggtactcggcgtatcactattctcaccccccgcttgttgaaaggttagctgcaattgatgaagaggccaagaaaacagactga

Protein Analysis

660

Amino Acids

75.52

Weight (kDa)

7.32

Isoelectric Point (pI)

36.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 281
AccB7I CCANNNNNTGG 1 cut(s) 1753
AccI GTMKAC 1 cut(s) 1360
AciI CCGC 4 cut(s) 76, 1607, 1833, 1931
AclWI GGATC 4 cut(s) 733, 1441, 1609, 1889
AcoI YGGCCR 2 cut(s) 1251, 1567
AcsI RAATTY 6 cut(s) 228, 465, 1173, 1657, 1793, 1873
AcuI CTGAAG 1 cut(s) 1138
AfaI GTAC 5 cut(s) 50, 386, 758, 1469, 1904
AfiI CCNNNNNNNGG 2 cut(s) 16, 1753
AflII CTTAAG 1 cut(s) 1397
AflIII ACRYGT 2 cut(s) 453, 1161
AjiI CACGTC 1 cut(s) 1118
AjnI CCWGG 1 cut(s) 1752
AleI CACNNNNGTG 1 cut(s) 1103
Alw21I GWGCWC 1 cut(s) 1284
Alw26I GTCTC 4 cut(s) 267, 761, 975, 1152
AlwI GGATC 4 cut(s) 733, 1441, 1609, 1889
AlwNI CAGNNNCTG 1 cut(s) 1753
Ama87I CYCGRG 1 cut(s) 689
AoxI GGCC 5 cut(s) 292, 1000, 1251, 1567, 1965
ApeKI GCWGC 2 cut(s) 86, 1949
ApoI RAATTY 6 cut(s) 228, 465, 1173, 1657, 1793, 1873
AseI ATTAAT 1 cut(s) 752
AspS9I GGNCC 1 cut(s) 1196
AsuHPI GGTGA 2 cut(s) 625, 1916
AsuII TTCGAA 1 cut(s) 1661
AvaI CYCGRG 1 cut(s) 689
AvaII GGWCC 1 cut(s) 1196
AxyI CCTNAGG 1 cut(s) 645
BalI TGGCCA 2 cut(s) 1253, 1569
BauI CACGAG 1 cut(s) 864
Bbv12I GWGCWC 1 cut(s) 1284
BbvCI CCTCAGC 1 cut(s) 656
BbvI GCAGC 2 cut(s) 73, 1936
BccI CCATC 3 cut(s) 716, 919, 1424
BceAI ACGGC 1 cut(s) 800
BciT130I CCWGG 1 cut(s) 1754
BciVI GTATCC 1 cut(s) 772
BcoDI GTCTC 4 cut(s) 267, 761, 975, 1152
BfaI CTAG 2 cut(s) 995, 1649
BfmI CTRYAG 3 cut(s) 871, 1628, 1862
BfrI CTTAAG 1 cut(s) 1397
BfuI GTATCC 1 cut(s) 772
BisI GCNGC 3 cut(s) 87, 1833, 1950
BlsI GCNGC 3 cut(s) 88, 1834, 1951
Bme1390I CCNGG 1 cut(s) 1754
Bme18I GGWCC 1 cut(s) 1196
BmeT110I CYCGRG 1 cut(s) 689
BmgBI CACGTC 1 cut(s) 1118
BmgT120I GGNCC 1 cut(s) 1196
BmrFI CCNGG 1 cut(s) 1754
BmsI GCATC 1 cut(s) 1795
Bpu10I CCTNAGC 1 cut(s) 656
Bpu14I TTCGAA 1 cut(s) 1661
BpuEI CTTGAG 1 cut(s) 785
BsaBI GATNNNNATC 2 cut(s) 593, 1301
BsaJI CCNNGG 3 cut(s) 251, 959, 1898
BsaXI ACNNNNNCTCC 4 cut(s) 264, 294, 972, 1002
Bsc4I CCNNNNNNNGG 2 cut(s) 16, 1753
Bse1I ACTGG 1 cut(s) 1700
Bse21I CCTNAGG 1 cut(s) 645
Bse3DI GCAATG 1 cut(s) 1462
Bse8I GATNNNNATC 2 cut(s) 593, 1301
BseBI CCWGG 1 cut(s) 1754
BseDI CCNNGG 3 cut(s) 251, 959, 1898
BseJI GATNNNNATC 2 cut(s) 593, 1301
BseLI CCNNNNNNNGG 2 cut(s) 16, 1753
BseMI GCAATG 1 cut(s) 1462
BseMII CTCAG 4 cut(s) 237, 636, 647, 1378
BseNI ACTGG 1 cut(s) 1700
BseXI GCAGC 2 cut(s) 73, 1936
BseYI CCCAGC 1 cut(s) 1695
BsgI GTGCAG 2 cut(s) 1250, 1631
BshFI GGCC 5 cut(s) 294, 1002, 1253, 1569, 1967
BsiHKAI GWGCWC 1 cut(s) 1284
BsiHKCI CYCGRG 1 cut(s) 689
BslI CCNNNNNNNGG 2 cut(s) 16, 1753
BsmAI GTCTC 4 cut(s) 267, 761, 975, 1152
BsnI GGCC 5 cut(s) 294, 1002, 1253, 1569, 1967
BsoBI CYCGRG 1 cut(s) 689
Bsp119I TTCGAA 1 cut(s) 1661
Bsp1286I GDGCHC 1 cut(s) 1284
Bsp1407I TGTACA 2 cut(s) 48, 756
Bsp143I GATC 8 cut(s) 360, 594, 725, 1068, 1302, 1433, 1614, 1894
BspACI CCGC 4 cut(s) 76, 1607, 1833, 1931
BspANI GGCC 5 cut(s) 294, 1002, 1253, 1569, 1967
BspCNI CTCAG 4 cut(s) 236, 637, 648, 1377
BspHI TCATGA 4 cut(s) 196, 744, 904, 1558
BspPI GGATC 4 cut(s) 733, 1441, 1609, 1889
BspT104I TTCGAA 1 cut(s) 1661
BspTI CTTAAG 1 cut(s) 1397
BsrDI GCAATG 1 cut(s) 1462
BsrGI TGTACA 2 cut(s) 48, 756
BsrI ACTGG 1 cut(s) 1700
BssECI CCNNGG 3 cut(s) 251, 959, 1898
BssMI GATC 8 cut(s) 360, 594, 725, 1068, 1302, 1433, 1614, 1894
BssSI CACGAG 1 cut(s) 864
BssT1I CCWWGG 3 cut(s) 251, 959, 1898
Bst2BI CACGAG 1 cut(s) 864
Bst2UI CCWGG 1 cut(s) 1754
Bst4CI ACNGT 4 cut(s) 167, 875, 1632, 1667
Bst6I CTCTTC 4 cut(s) 645, 1353, 1863, 1956
BstAFI CTTAAG 1 cut(s) 1397
BstAUI TGTACA 2 cut(s) 48, 756
BstBI TTCGAA 1 cut(s) 1661
BstC8I GCNNGC 4 cut(s) 292, 678, 1000, 1386
BstDEI CTNAG 5 cut(s) 223, 286, 645, 656, 1364
BstKTI GATC 8 cut(s) 363, 597, 728, 1071, 1305, 1436, 1617, 1897
BstMAI GTCTC 4 cut(s) 267, 761, 975, 1152
BstMBI GATC 8 cut(s) 360, 594, 725, 1068, 1302, 1433, 1614, 1894
BstMWI GCNNNNNNNGC 4 cut(s) 335, 1043, 1250, 1553
BstNI CCWGG 1 cut(s) 1754
BstNSI RCATGY 3 cut(s) 86, 457, 1165
BstSCI CCNGG 1 cut(s) 1752
BstSFI CTRYAG 3 cut(s) 871, 1628, 1862
BstV1I GCAGC 2 cut(s) 73, 1936
BstX2I RGATCY 3 cut(s) 725, 1433, 1614
BstXI CCANNNNNNTGG 2 cut(s) 826, 1105
BstYI RGATCY 3 cut(s) 725, 1433, 1614
Bsu36I CCTNAGG 1 cut(s) 645
BsuI GTATCC 1 cut(s) 772
BsuRI GGCC 5 cut(s) 294, 1002, 1253, 1569, 1967
BtrI CACGTC 1 cut(s) 1118
BtsI GCAGTG 1 cut(s) 1526
BtsIMutI CAGTG 3 cut(s) 1071, 1526, 1890
Cac8I GCNNGC 4 cut(s) 292, 678, 1000, 1386
CaiI CAGNNNCTG 1 cut(s) 1753
CciI TCATGA 4 cut(s) 196, 744, 904, 1558
Cfr13I GGNCC 1 cut(s) 1196
CsiI ACCWGGT 1 cut(s) 1752
Csp6I GTAC 5 cut(s) 49, 385, 757, 1468, 1903
CviQI GTAC 5 cut(s) 49, 385, 757, 1468, 1903
DdeI CTNAG 5 cut(s) 223, 286, 645, 656, 1364
DpnI GATC 8 cut(s) 362, 596, 727, 1070, 1304, 1435, 1616, 1896
DpnII GATC 8 cut(s) 360, 594, 725, 1068, 1302, 1433, 1614, 1894
DrdI GACNNNNNNGTC 1 cut(s) 281
DseDI GACNNNNNNGTC 1 cut(s) 281
EaeI YGGCCR 2 cut(s) 1251, 1567
Eam1104I CTCTTC 4 cut(s) 645, 1353, 1863, 1956
EarI CTCTTC 4 cut(s) 645, 1353, 1863, 1956
EciI GGCGGA 1 cut(s) 65
Eco130I CCWWGG 3 cut(s) 251, 959, 1898
Eco47I GGWCC 1 cut(s) 1196
Eco57I CTGAAG 1 cut(s) 1138
Eco81I CCTNAGG 1 cut(s) 645
Eco88I CYCGRG 1 cut(s) 689
EcoRII CCWGG 1 cut(s) 1752
EcoT14I CCWWGG 3 cut(s) 251, 959, 1898
ErhI CCWWGG 3 cut(s) 251, 959, 1898
FauI CCCGC 1 cut(s) 1938
FblI GTMKAC 1 cut(s) 1360
Fnu4HI GCNGC 3 cut(s) 87, 1833, 1950
Fsp4HI GCNGC 3 cut(s) 87, 1833, 1950
FspBI CTAG 2 cut(s) 995, 1649
GluI GCNGC 3 cut(s) 87, 1833, 1950
GsaI CCCAGC 1 cut(s) 1699
HaeIII GGCC 5 cut(s) 294, 1002, 1253, 1569, 1967
HindIII AAGCTT 2 cut(s) 803, 1577
HinfI GANTC 6 cut(s) 221, 886, 929, 1269, 1513, 1713
HphI GGTGA 2 cut(s) 625, 1916
Hpy166II GTNNAC 4 cut(s) 633, 1199, 1341, 1361
Hpy188I TCNGA 3 cut(s) 93, 243, 1157
Hpy8I GTNNAC 4 cut(s) 633, 1199, 1341, 1361
HpyAV CCTTC 3 cut(s) 116, 824, 824
HpyCH4III ACNGT 4 cut(s) 167, 875, 1632, 1667
HpyCH4IV ACGT 1 cut(s) 1117
HpyCH4V TGCA 8 cut(s) 506, 1027, 1037, 1214, 1231, 1524, 1612, 1952
HpyF10VI GCNNNNNNNGC 4 cut(s) 335, 1043, 1250, 1553
HpyF3I CTNAG 5 cut(s) 223, 286, 645, 656, 1364
HpySE526I ACGT 1 cut(s) 1117
Kzo9I GATC 8 cut(s) 360, 594, 725, 1068, 1302, 1433, 1614, 1894
LmnI GCTCC 2 cut(s) 1327, 1819
Lsp1109I GCAGC 2 cut(s) 73, 1936
LweI GCATC 1 cut(s) 1795
MabI ACCWGGT 1 cut(s) 1752
MaeI CTAG 2 cut(s) 995, 1649
MaeII ACGT 1 cut(s) 1117
MaeIII GTNAC 5 cut(s) 205, 861, 913, 1051, 1062
MalI GATC 8 cut(s) 362, 596, 727, 1070, 1304, 1435, 1616, 1896
MboI GATC 8 cut(s) 360, 594, 725, 1068, 1302, 1433, 1614, 1894
MfeI CAATTG 1 cut(s) 1953
MflI RGATCY 3 cut(s) 725, 1433, 1614
MhlI GDGCHC 1 cut(s) 1284
MlsI TGGCCA 2 cut(s) 1253, 1569
MluNI TGGCCA 2 cut(s) 1253, 1569
MlyI GAGTC 3 cut(s) 215, 895, 1707
MmeI TCCRAC 2 cut(s) 125, 833
Mox20I TGGCCA 2 cut(s) 1253, 1569
MscI TGGCCA 2 cut(s) 1253, 1569
MseI TTAA 8 cut(s) 458, 624, 752, 1332, 1398, 1479, 1581, 1770
MslI CAYNNNNRTG 3 cut(s) 1103, 1277, 1455
Msp20I TGGCCA 2 cut(s) 1253, 1569
MspA1I CMGCKG 1 cut(s) 655
MspCI CTTAAG 1 cut(s) 1397
MspR9I CCNGG 1 cut(s) 1754
MunI CAATTG 1 cut(s) 1953
MvaI CCWGG 1 cut(s) 1754
MwoI GCNNNNNNNGC 4 cut(s) 335, 1043, 1250, 1553
NdeII GATC 8 cut(s) 360, 594, 725, 1068, 1302, 1433, 1614, 1894
NmeAIII GCCGAG 2 cut(s) 1808, 1886
NmuCI GTSAC 4 cut(s) 205, 861, 913, 1062
NspI RCATGY 3 cut(s) 86, 457, 1165
NspV TTCGAA 1 cut(s) 1661
OliI CACNNNNGTG 1 cut(s) 1103
PaeR7I CTCGAG 1 cut(s) 689
PagI TCATGA 4 cut(s) 196, 744, 904, 1558
PciI ACATGT 2 cut(s) 453, 1161
PfeI GAWTC 3 cut(s) 929, 1269, 1513
PflMI CCANNNNNTGG 1 cut(s) 1753
PkrI GCNGC 3 cut(s) 88, 1834, 1951
PleI GAGTC 3 cut(s) 215, 894, 1707
PpsI GAGTC 3 cut(s) 215, 894, 1707
PscI ACATGT 2 cut(s) 453, 1161
PshBI ATTAAT 1 cut(s) 752
Psp6I CCWGG 1 cut(s) 1752
PspFI CCCAGC 1 cut(s) 1695
PspGI CCWGG 1 cut(s) 1752
PspPI GGNCC 1 cut(s) 1196
PspXI VCTCGAGB 1 cut(s) 689
PstNI CAGNNNCTG 1 cut(s) 1753
PsuI RGATCY 3 cut(s) 725, 1433, 1614
PvuII CAGCTG 1 cut(s) 655
RsaI GTAC 5 cut(s) 50, 386, 758, 1469, 1904
RsaNI GTAC 5 cut(s) 49, 385, 757, 1468, 1903
RseI CAYNNNNRTG 3 cut(s) 1103, 1277, 1455
SaqAI TTAA 8 cut(s) 458, 624, 752, 1332, 1398, 1479, 1581, 1770
SatI GCNGC 3 cut(s) 87, 1833, 1950
Sau3AI GATC 8 cut(s) 360, 594, 725, 1068, 1302, 1433, 1614, 1894
Sau96I GGNCC 1 cut(s) 1196
SchI GAGTC 3 cut(s) 215, 895, 1707
ScrFI CCNGG 1 cut(s) 1754
SduI GDGCHC 1 cut(s) 1284
SexAI ACCWGGT 1 cut(s) 1752
SfaNI GCATC 1 cut(s) 1795
SfcI CTRYAG 3 cut(s) 871, 1628, 1862
Sfr274I CTCGAG 1 cut(s) 689
SfuI TTCGAA 1 cut(s) 1661
SinI GGWCC 1 cut(s) 1196
SlaI CTCGAG 1 cut(s) 689
SmiMI CAYNNNNRTG 3 cut(s) 1103, 1277, 1455
SmlI CTYRAG 3 cut(s) 689, 800, 1397
SmoI CTYRAG 3 cut(s) 689, 800, 1397
SsiI CCGC 4 cut(s) 76, 1607, 1833, 1931
SspMI CTAG 2 cut(s) 995, 1649
StyD4I CCNGG 1 cut(s) 1752
StyI CCWWGG 3 cut(s) 251, 959, 1898
TaaI ACNGT 4 cut(s) 167, 875, 1632, 1667
TaiI ACGT 1 cut(s) 1120
TaqI TCGA 5 cut(s) 155, 402, 690, 1661, 1843
TatI WGTACW 3 cut(s) 48, 384, 756
TauI GCSGC 1 cut(s) 1835
TfiI GAWTC 3 cut(s) 929, 1269, 1513
Tru1I TTAA 8 cut(s) 458, 624, 752, 1332, 1398, 1479, 1581, 1770
Tru9I TTAA 8 cut(s) 458, 624, 752, 1332, 1398, 1479, 1581, 1770
TscAI CASTG 3 cut(s) 1078, 1526, 1897
TseFI GTSAC 4 cut(s) 205, 861, 913, 1062
TseI GCWGC 2 cut(s) 86, 1949
Tsp45I GTSAC 4 cut(s) 205, 861, 913, 1062
TspGWI ACGGA 2 cut(s) 1485, 1832
TspRI CASTG 3 cut(s) 1078, 1526, 1897
Van91I CCANNNNNTGG 1 cut(s) 1753
Vha464I CTTAAG 1 cut(s) 1397
VpaK11BI GGWCC 1 cut(s) 1196
VspI ATTAAT 1 cut(s) 752
XapI RAATTY 6 cut(s) 228, 465, 1173, 1657, 1793, 1873
XceI RCATGY 3 cut(s) 86, 457, 1165
XhoI CTCGAG 1 cut(s) 689
XmiI GTMKAC 1 cut(s) 1360
XspI CTAG 2 cut(s) 995, 1649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.