Rorug01G0255900

CAAX prenyl protease 1 homolog

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
36552791 .. 36555520
2730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0255900.1

Sequence Viewer

Length: 1122 bp
ATGCCGATGCTTGCTCCTGCTGAGCAAACCCCTGTGGTTTTCGACTCCCAAGTCATTCAGTACCAATCCAACATCCCTTCCCAGTTCATATGGCCAGATCATGAGAAGCCGAGCCCCGACAGGCCGGACCTTCTCTCTCCGGCTATCGACCTCAACGGCTTCCTCAGCGGTGACCCTGCCATCGTCGCGAACTCGATTCGTTCGGTCGACGAGGCCTGCAAGAAGCATGGATTCTTCCTCGTTGTGAACCACGGAGTTGATCCGGAGCTCATTGTGAAAGCTCACGAGTACATGGACGTGTTCTTTGAGATGAAGCTCTCGGAGAAGCAAAGGGCTCAGAGGAAGGTTGGTGAGAGCAATGGTTATACTAGTAGCTTCACCGGCAGGTTTAATTCCAAACTTCCATGGAAAGAAACACTTTCTTTCAGGTACTCTGCTAAGAGCCAGAGCTCAACAATCGTCAAGGACTACTTTGTGAATGTGTTGGGTGAAGATTTCAAAGAAATCGGGAAGTACTACCAAGAATACACAGAACTGATGAACAAACTATCTCATGGGATACTGGAACTATTGGGACTGAGCCTGGGAGTTGGGCGGGAGTACTTCAAAGAGTTATACAGAGGAAACGATTCAATCATGAGGTTGAACTACTATCCAATGTGCCAAAAACCAGATCTAACACTGGGAACTGGGCCTCACTGTGATCCCACTTCCTTGACAATCCTTCATCAAGACCAAGTAGGGGGACTTGAAGTGTTTTTCGATGAGAAGTGGCACACCGTTACTCCTGTCCTTGGTTCTTTCGTTATCAACATTGGTGATACTTTTATGGCTCTGTGCAACGGGATTTACAAGAGCTGCTTACACAGGGCTGTGGTAAACAACAAAACTGTAAGGAAATCTCTTGCTTTCTTTCTCAATCCAAACAAGGACAGAGTAGTGACTCCACCAGCAAGTTTGATCAGTGCTGATAACCCGAGATTGTACCCAGACTTTACTTGGCCTACTCTGCTAGAGTTTACTCAGAAACACTACAGGGCTGACATGAGCACCATTGATGCTTTCTCGGACTGGATTAATAAGCAGAAAGGGGGAGAGGAAAAGAAGGAACAAGGAAACTAG

Protein Analysis

373

Amino Acids

42.35

Weight (kDa)

6.08

Isoelectric Point (pI)

33.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 47 - 150 2.8e-22 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 210 - 308 6.2e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 50
Acc36I ACCTGC 1 cut(s) 375
AccI GTMKAC 1 cut(s) 207
AccII CGCG 1 cut(s) 188
AccIII TCCGGA 1 cut(s) 262
AciI CCGC 2 cut(s) 168, 595
AclWI GGATC 2 cut(s) 254, 698
AcoI YGGCCR 1 cut(s) 92
AfaI GTAC 6 cut(s) 62, 290, 431, 515, 602, 986
AfiI CCNNNNNNNGG 2 cut(s) 742, 794
AflIII ACRYGT 1 cut(s) 297
AgsI TTSAA 5 cut(s) 499, 607, 633, 646, 752
AhlI ACTAGT 1 cut(s) 368
AjiI CACGTC 1 cut(s) 298
AjnI CCWGG 1 cut(s) 582
AluBI AGCT 6 cut(s) 268, 281, 316, 375, 450, 858
AluI AGCT 6 cut(s) 268, 281, 316, 375, 450, 858
Alw21I GWGCWC 3 cut(s) 270, 452, 1052
AlwI GGATC 2 cut(s) 254, 698
Ama87I CYCGRG 1 cut(s) 976
Aor13HI TCCGGA 1 cut(s) 262
AoxI GGCC 5 cut(s) 92, 122, 213, 692, 1001
ApeKI GCWGC 1 cut(s) 858
ArsI GACNNNNNNTTYG 2 cut(s) 287, 319
AseI ATTAAT 1 cut(s) 1077
Asp700I GAANNNNTTC 1 cut(s) 628
AspS9I GGNCC 2 cut(s) 127, 692
AsuHPI GGTGA 5 cut(s) 182, 362, 370, 500, 830
AvaI CYCGRG 1 cut(s) 976
AvaII GGWCC 1 cut(s) 127
BalI TGGCCA 1 cut(s) 94
BanII GRGCYC 4 cut(s) 116, 270, 337, 452
BauI CACGAG 1 cut(s) 284
Bbv12I GWGCWC 3 cut(s) 270, 452, 1052
BbvCI CCTCAGC 1 cut(s) 164
BbvI GCAGC 1 cut(s) 845
BccI CCATC 1 cut(s) 188
BceAI ACGGC 1 cut(s) 172
BciT130I CCWGG 1 cut(s) 584
BciVI GTATCC 1 cut(s) 552
BclI TGATCA 1 cut(s) 960
BcuI ACTAGT 1 cut(s) 368
BfaI CTAG 3 cut(s) 369, 1013, 1120
BfmI CTRYAG 1 cut(s) 1033
BfuAI ACCTGC 1 cut(s) 375
BfuI GTATCC 1 cut(s) 552
BglII AGATCT 1 cut(s) 673
BisI GCNGC 1 cut(s) 859
BlpI GCTNAGC 1 cut(s) 21
BlsI GCNGC 1 cut(s) 860
BmcAI AGTACT 2 cut(s) 515, 602
Bme1390I CCNGG 1 cut(s) 584
Bme18I GGWCC 1 cut(s) 127
BmeT110I CYCGRG 1 cut(s) 976
BmgBI CACGTC 1 cut(s) 298
BmgT120I GGNCC 2 cut(s) 127, 692
BmrFI CCNGG 1 cut(s) 584
BmrI ACTGGG 3 cut(s) 76, 692, 699
BmsI GCATC 1 cut(s) 1048
BmuI ACTGGG 3 cut(s) 76, 692, 699
Bpu10I CCTNAGC 1 cut(s) 164
Bpu1102I GCTNAGC 1 cut(s) 21
BsaJI CCNNGG 4 cut(s) 250, 404, 583, 793
BsaWI WCCGGW 1 cut(s) 262
BsaXI ACNNNNNCTCC 2 cut(s) 769, 799
Bsc4I CCNNNNNNNGG 2 cut(s) 742, 794
Bse118I RCCGGY 1 cut(s) 380
Bse1I ACTGG 5 cut(s) 82, 567, 687, 694, 1076
Bse3DI GCAATG 1 cut(s) 364
BseAI TCCGGA 1 cut(s) 262
BseBI CCWGG 1 cut(s) 584
BseDI CCNNGG 4 cut(s) 250, 404, 583, 793
BseGI GGATG 1 cut(s) 72
BseLI CCNNNNNNNGG 2 cut(s) 742, 794
BseMI GCAATG 1 cut(s) 364
BseMII CTCAG 5 cut(s) 12, 178, 350, 569, 1037
BseNI ACTGG 5 cut(s) 82, 567, 687, 694, 1076
BseXI GCAGC 1 cut(s) 845
Bsh1236I CGCG 1 cut(s) 188
Bsh1285I CGRYCG 1 cut(s) 207
BshFI GGCC 5 cut(s) 94, 124, 215, 694, 1003
BsiEI CGRYCG 1 cut(s) 207
BsiHKAI GWGCWC 3 cut(s) 270, 452, 1052
BsiHKCI CYCGRG 1 cut(s) 976
BsiSI CCGG 4 cut(s) 125, 140, 263, 381
BslFI GGGAC 2 cut(s) 588, 759
BslI CCNNNNNNNGG 2 cut(s) 742, 794
BsmFI GGGAC 2 cut(s) 588, 759
BsnI GGCC 5 cut(s) 94, 124, 215, 694, 1003
BsoBI CYCGRG 1 cut(s) 976
Bsp1286I GDGCHC 5 cut(s) 116, 270, 337, 452, 1052
Bsp13I TCCGGA 1 cut(s) 262
Bsp143I GATC 5 cut(s) 97, 259, 673, 703, 960
Bsp1720I GCTNAGC 1 cut(s) 21
Bsp19I CCATGG 1 cut(s) 404
Bsp68I TCGCGA 1 cut(s) 188
BspACI CCGC 2 cut(s) 168, 595
BspANI GGCC 5 cut(s) 94, 124, 215, 694, 1003
BspCNI CTCAG 5 cut(s) 13, 177, 349, 570, 1036
BspEI TCCGGA 1 cut(s) 262
BspFNI CGCG 1 cut(s) 188
BspHI TCATGA 2 cut(s) 100, 636
BspMI ACCTGC 1 cut(s) 375
BspPI GGATC 2 cut(s) 254, 698
BsrDI GCAATG 1 cut(s) 364
BsrFI RCCGGY 1 cut(s) 380
BsrI ACTGG 5 cut(s) 82, 567, 687, 694, 1076
BssAI RCCGGY 1 cut(s) 380
BssECI CCNNGG 4 cut(s) 250, 404, 583, 793
BssMI GATC 5 cut(s) 97, 259, 673, 703, 960
BssSI CACGAG 1 cut(s) 284
BssT1I CCWWGG 2 cut(s) 404, 793
Bst2BI CACGAG 1 cut(s) 284
Bst2UI CCWGG 1 cut(s) 584
Bst4CI ACNGT 3 cut(s) 701, 781, 892
BstC8I GCNNGC 2 cut(s) 12, 217
BstDEI CTNAG 6 cut(s) 21, 164, 336, 438, 578, 1023
BstDSI CCRYGG 2 cut(s) 250, 404
BstEII GGTNACC 1 cut(s) 170
BstF5I GGATG 1 cut(s) 72
BstFNI CGCG 1 cut(s) 188
BstKTI GATC 5 cut(s) 100, 262, 676, 706, 963
BstMBI GATC 5 cut(s) 97, 259, 673, 703, 960
BstMCI CGRYCG 1 cut(s) 207
BstMWI GCNNNNNNNGC 4 cut(s) 165, 185, 381, 1009
BstNI CCWGG 1 cut(s) 584
BstPI GGTNACC 1 cut(s) 170
BstSCI CCNGG 1 cut(s) 582
BstSFI CTRYAG 1 cut(s) 1033
BstUI CGCG 1 cut(s) 188
BstV1I GCAGC 1 cut(s) 845
BstX2I RGATCY 1 cut(s) 673
BstYI RGATCY 1 cut(s) 673
BsuI GTATCC 1 cut(s) 552
BsuRI GGCC 5 cut(s) 94, 124, 215, 694, 1003
BtgI CCRYGG 2 cut(s) 250, 404
BtrI CACGTC 1 cut(s) 298
BtsCI GGATG 1 cut(s) 72
BtsIMutI CAGTG 3 cut(s) 680, 697, 970
BtuMI TCGCGA 1 cut(s) 188
BveI ACCTGC 1 cut(s) 375
Cac8I GCNNGC 2 cut(s) 12, 217
CciI TCATGA 2 cut(s) 100, 636
Cfr10I RCCGGY 1 cut(s) 380
Cfr13I GGNCC 2 cut(s) 127, 692
Csp6I GTAC 6 cut(s) 61, 289, 430, 514, 601, 985
CviAII CATG 7 cut(s) 101, 227, 292, 405, 554, 637, 1045
CviQI GTAC 6 cut(s) 61, 289, 430, 514, 601, 985
DdeI CTNAG 6 cut(s) 21, 164, 336, 438, 578, 1023
DpnI GATC 5 cut(s) 99, 261, 675, 705, 962
DpnII GATC 5 cut(s) 97, 259, 673, 703, 960
DrdI GACNNNNNNGTC 1 cut(s) 50
DseDI GACNNNNNNGTC 1 cut(s) 50
EaeI YGGCCR 1 cut(s) 92
Ecl136II GAGCTC 2 cut(s) 268, 450
Eco130I CCWWGG 2 cut(s) 404, 793
Eco147I AGGCCT 1 cut(s) 215
Eco24I GRGCYC 4 cut(s) 116, 270, 337, 452
Eco47I GGWCC 1 cut(s) 127
Eco53kI GAGCTC 2 cut(s) 268, 450
Eco88I CYCGRG 1 cut(s) 976
Eco91I GGTNACC 1 cut(s) 170
EcoICRI GAGCTC 2 cut(s) 268, 450
EcoO65I GGTNACC 1 cut(s) 170
EcoRII CCWGG 1 cut(s) 582
EcoT14I CCWWGG 2 cut(s) 404, 793
EcoT38I GRGCYC 4 cut(s) 116, 270, 337, 452
ErhI CCWWGG 2 cut(s) 404, 793
FaeI CATG 7 cut(s) 104, 230, 295, 408, 557, 640, 1048
FalI AAGNNNNNCTT 6 cut(s) 402, 434, 455, 487, 845, 877
FaqI GGGAC 2 cut(s) 588, 759
FatI CATG 7 cut(s) 100, 226, 291, 404, 553, 636, 1044
FauI CCCGC 1 cut(s) 588
FauNDI CATATG 1 cut(s) 89
FbaI TGATCA 1 cut(s) 960
FblI GTMKAC 1 cut(s) 207
Fnu4HI GCNGC 1 cut(s) 859
FokI GGATG 1 cut(s) 59
FriOI GRGCYC 4 cut(s) 116, 270, 337, 452
Fsp4HI GCNGC 1 cut(s) 859
FspBI CTAG 3 cut(s) 369, 1013, 1120
GluI GCNGC 1 cut(s) 859
HaeIII GGCC 5 cut(s) 94, 124, 215, 694, 1003
HapII CCGG 4 cut(s) 125, 140, 263, 381
Hin1II CATG 7 cut(s) 104, 230, 295, 408, 557, 640, 1048
HincII GTYRAC 1 cut(s) 208
HindII GTYRAC 1 cut(s) 208
HinfI GANTC 5 cut(s) 44, 196, 231, 629, 943
HpaII CCGG 4 cut(s) 125, 140, 263, 381
HphI GGTGA 5 cut(s) 182, 362, 370, 500, 830
Hpy166II GTNNAC 4 cut(s) 208, 247, 880, 1020
Hpy188I TCNGA 4 cut(s) 322, 339, 1026, 1069
Hpy188III TCNNGA 7 cut(s) 101, 187, 263, 284, 508, 637, 731
Hpy8I GTNNAC 4 cut(s) 208, 247, 880, 1020
Hpy99I CGWCG 2 cut(s) 188, 212
HpyAV CCTTC 5 cut(s) 87, 140, 337, 734, 1099
HpyCH4III ACNGT 3 cut(s) 701, 781, 892
HpyCH4IV ACGT 1 cut(s) 297
HpyCH4V TGCA 2 cut(s) 219, 840
HpyF10VI GCNNNNNNNGC 4 cut(s) 165, 185, 381, 1009
HpyF3I CTNAG 6 cut(s) 21, 164, 336, 438, 578, 1023
HpySE526I ACGT 1 cut(s) 297
Hsp92II CATG 7 cut(s) 104, 230, 295, 408, 557, 640, 1048
Kpn2I TCCGGA 1 cut(s) 262
Ksp22I TGATCA 1 cut(s) 960
Kzo9I GATC 5 cut(s) 97, 259, 673, 703, 960
LmnI GCTCC 2 cut(s) 19, 265
Lsp1109I GCAGC 1 cut(s) 845
LweI GCATC 1 cut(s) 1048
MaeI CTAG 3 cut(s) 369, 1013, 1120
MaeII ACGT 1 cut(s) 297
MaeIII GTNAC 3 cut(s) 170, 781, 940
MalI GATC 5 cut(s) 99, 261, 675, 705, 962
MboI GATC 5 cut(s) 97, 259, 673, 703, 960
MboII GAAGA 2 cut(s) 226, 503
MflI RGATCY 1 cut(s) 673
MhlI GDGCHC 5 cut(s) 116, 270, 337, 452, 1052
MlsI TGGCCA 1 cut(s) 94
MluCI AATT 1 cut(s) 391
MluNI TGGCCA 1 cut(s) 94
MlyI GAGTC 2 cut(s) 38, 937
MmeI TCCRAC 1 cut(s) 93
MnlI CCTC 9 cut(s) 161, 173, 205, 248, 333, 614, 633, 705, 1090
Mox20I TGGCCA 1 cut(s) 94
MroI TCCGGA 1 cut(s) 262
MroXI GAANNNNTTC 1 cut(s) 628
MscI TGGCCA 1 cut(s) 94
MseI TTAA 2 cut(s) 390, 1077
MslI CAYNNNNRTG 1 cut(s) 296
Msp20I TGGCCA 1 cut(s) 94
MspA1I CMGCKG 1 cut(s) 168
MspI CCGG 4 cut(s) 125, 140, 263, 381
MspR9I CCNGG 1 cut(s) 584
MvaI CCWGG 1 cut(s) 584
MvnI CGCG 1 cut(s) 188
MwoI GCNNNNNNNGC 4 cut(s) 165, 185, 381, 1009
NcoI CCATGG 1 cut(s) 404
NdeI CATATG 1 cut(s) 89
NdeII GATC 5 cut(s) 97, 259, 673, 703, 960
NlaIII CATG 7 cut(s) 104, 230, 295, 408, 557, 640, 1048
NmeAIII GCCGAG 1 cut(s) 135
NmuCI GTSAC 2 cut(s) 170, 940
NruI TCGCGA 1 cut(s) 188
PagI TCATGA 2 cut(s) 100, 636
PceI AGGCCT 1 cut(s) 215
PdmI GAANNNNTTC 1 cut(s) 628
PfeI GAWTC 3 cut(s) 196, 231, 629
PkrI GCNGC 1 cut(s) 860
PleI GAGTC 2 cut(s) 38, 937
PpsI GAGTC 2 cut(s) 38, 937
PshBI ATTAAT 1 cut(s) 1077
Psp124BI GAGCTC 2 cut(s) 270, 452
Psp6I CCWGG 1 cut(s) 582
PspEI GGTNACC 1 cut(s) 170
PspGI CCWGG 1 cut(s) 582
PspPI GGNCC 2 cut(s) 127, 692
PsuI RGATCY 1 cut(s) 673
RruI TCGCGA 1 cut(s) 188
RsaI GTAC 6 cut(s) 62, 290, 431, 515, 602, 986
RsaNI GTAC 6 cut(s) 61, 289, 430, 514, 601, 985
RseI CAYNNNNRTG 1 cut(s) 296
SacI GAGCTC 2 cut(s) 270, 452
SalI GTCGAC 1 cut(s) 206
SaqAI TTAA 2 cut(s) 390, 1077
SatI GCNGC 1 cut(s) 859
Sau3AI GATC 5 cut(s) 97, 259, 673, 703, 960
Sau96I GGNCC 2 cut(s) 127, 692
ScaI AGTACT 2 cut(s) 515, 602
SchI GAGTC 2 cut(s) 38, 937
ScrFI CCNGG 1 cut(s) 584
SduI GDGCHC 5 cut(s) 116, 270, 337, 452, 1052
SfaNI GCATC 1 cut(s) 1048
SfcI CTRYAG 1 cut(s) 1033
SinI GGWCC 1 cut(s) 127
SmiMI CAYNNNNRTG 1 cut(s) 296
SpeI ACTAGT 1 cut(s) 368
Sse9I AATT 1 cut(s) 391
SseBI AGGCCT 1 cut(s) 215
SsiI CCGC 2 cut(s) 168, 595
SspMI CTAG 3 cut(s) 369, 1013, 1120
SstI GAGCTC 2 cut(s) 270, 452
StuI AGGCCT 1 cut(s) 215
StyD4I CCNGG 1 cut(s) 582
StyI CCWWGG 2 cut(s) 404, 793
TaaI ACNGT 3 cut(s) 701, 781, 892
TaiI ACGT 1 cut(s) 300
TaqI TCGA 5 cut(s) 42, 147, 194, 207, 762
TaqII GACCGA 1 cut(s) 193
TasI AATT 1 cut(s) 391
TatI WGTACW 3 cut(s) 288, 513, 600
TfiI GAWTC 3 cut(s) 196, 231, 629
Tru1I TTAA 2 cut(s) 390, 1077
Tru9I TTAA 2 cut(s) 390, 1077
TscAI CASTG 3 cut(s) 687, 704, 970
TseFI GTSAC 2 cut(s) 170, 940
TseI GCWGC 1 cut(s) 858
Tsp45I GTSAC 2 cut(s) 170, 940
TspDTI ATGAA 4 cut(s) 76, 326, 554, 716
TspGWI ACGGA 1 cut(s) 267
TspRI CASTG 3 cut(s) 687, 704, 970
VpaK11BI GGWCC 1 cut(s) 127
VspI ATTAAT 1 cut(s) 1077
XcmI CCANNNNNNNNNTGG 1 cut(s) 996
XmiI GTMKAC 1 cut(s) 207
XmnI GAANNNNTTC 1 cut(s) 628
XspI CTAG 3 cut(s) 369, 1013, 1120
ZrmI AGTACT 2 cut(s) 515, 602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.