Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001762

Physical Location & Seq

Genomic Coordinates Reverse (-)

59669771 .. 59676889

Gene Structure 7119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00266380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGAAAAGAAAAACAACGGAGACGATGGAGTCCTCTGGGTATCACGGTTTAGCCTGTAGTCCTCCTCCGCCGGAGCCAGAGATTTTCTACGTCATAGACGATATGCACATGGATAAATCAGATTGTGAGGGACCAAACGCCGACGACCACTGTGCGAGTGTTTTTCCCATCCTCGATGAAATTATTCCTCCGGCGGAGCCAGAGATAGACGATGTGCACATAGATAAACCAGATTGTGAGGGACCAAACGCCGACGACCACTGTGAGAGTGTTTTTCCCATCCTCGACGAAATTCTTCCTCCAGCGGAGCCAGAGATAGACGATGTGTACATAGATAATTCAGATTGTGAGGGACCAAACGCCGACGACCACTGTGAGAGTGTTTTTCCCATCCCCGATGAAATCCCAGATTCTAAATTGGAGGAATTTTTTCTGCAAATGAAATCGAACTATGAACCTTGCTATAGAGCCACACTGGATAAGGCTGCGCGAACCATCACATTCTCTCAACAACCACTCAAGTTGATGCCTGGTCCTGCTTTGAACAAATATGGCGTGCTTGAACTCAACACTTTCTTTGTGTACTTCCCCGAAAAACAAGCAACAAAGTTGAAAGCCGCATGGCCTGAGGTTGAATTAACCTTAAATGCCTACTCCCTTTCATGCGATCTGAATCTGGCCAAGTGTTGCATGCAAGTCTCAACAACCCCATCGCTTGAGGATCCATTGGAACTGATTTCAAGTGGAACTGATTTAAAAGGCCCAGCATCACTACTTCAGGCGTTAGAAATATTCCAAGAAGTTAGGCAACAGGAAACCATCAACATAGGATTTCAGCAGGGTGGGATTTGCTCAAAATTTGGGATCAAGAAGGATGACTATCTTAAACGATGGGAATGTCTCTTCTGCTCACTAAAGGCACTTTCAAAAGCGACACATTGTCATATCTTTCTTGACGAAAACACTTTTACTGCTGTGACTGCTGTGGGTAGCTCAGTTGAAAGAATTTCTCAGCTGAAGGCTGTTGTGGAAGACTGTATAACCAAGAATCTGTGTCCTTCGACCTCTATTAGGAGGTTTGAAACGGAAGTTGTAATGTATCAATCGATGGATGATCTTGATGATCCACATGCCAAGCACACGGAATGCTTGAAGTCTGGCCCTTTGTCGGACAAAGATGGAATGCTTGAAGAGGAATACCGTGAACGATGGGAATGTCTTCGCCACTCCCTACAGATACTTGCTGAAGTGGTGGAGTGTAATGTATTTCTTAACGATAACACTGTTGCTGCTGTGGGGGAAACCTCAGTAGTAATGATCAAGCAGTTGGTGGAAAACTGCATTCTTCATAATTTGTGTCCTGGGACTGCCGCCAAGAATTATAATCATTTATCAGAAGGTGTGAAAAGTATTGAGGACCCACATGTCGAGTGTTACATGATAGTCTCCAAAACTACAAACGCTGGGGATCCAGATATCACTGACAAGATTTGGGATTTCCTTAAACTTCTGTCAATTGATGTTGAGCCTTCTAAGGCAATAGAAGTACTGAATGGCCGTCTGCATTTTGACTTCATCCCGACAGGGTATAGATATGGTGGGCTCTGTTCAAAATTTAGGATCACTGAGGAGCAATTTGCAGACGTGGTGTGGCCACGTATTGAGCGCGGCTTAGAGCCAAACGTTATTACTGTCTTGGGACCTGGAGAACTAGGGGTGTTCAGAAGGTTTGTGGAACAGTGTTTTCGTTTCAGACCTCGTCCGACTTGTGTCATGCGGGCTAGGATAAAAGGCAGGTTCGTGCCACCTTTTGGTTGTGAGGCTCGTGCATTTTTCTTTGGCGAGGATGTGGCCATGCTTGAGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00590 ko00790 ko00980 ko01100 ko05204 map00590 map00790 map00980 map01100 map05204

Pfam Domains

Protein Families

adh_short

Protein Analysis

622

Amino Acids

69.92

Weight (kDa)

4.67

Isoelectric Point (pI)

50.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001762)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g09741 FvH4_5g09770 FvH4_5g09780 FvH4_5g31341
rosa_chinensis	RchiOBHm_Chr3g0481091 RchiOBHm_Chr7g0188481 RchiOBHm_Chr7g0223281
rosa_laevigata	RLG00000001991 RLG00000004692 RLG00000023421
rosa_multiflora	Rmu_co8285797.1_g000001 Rmu_sc0001551.1_g000022 Rmu_sc0001576.1_g000004 Rmu_sc0005124.1_g000010 Rmu_sc0016427.1_g000002 Rmu_sc0021207.1_g000004 Rmu_sc0021207.1_g000006
rosa_roxburghii	Rroxscaffold_3G00235960 Rroxscaffold_3G00266380 Rroxscaffold_6G00400650
rosa_rugosa	Rorug03G0190200 Rorug03G0190300 Rorug03G0190400 Rorug06G0490800 Rorug07G0213900 Rorug07G0215700
rosa_samantha	Rh3AG240500 Rh3BG276100 Rh3BG276200 Rh3CG271400 Rh3CG271500 Rh3DG267600 Rh5CG142200 Rh7AG359300 Rh7AG359400 Rh7AG359500 Rh7BG347300 Rh7CG097800 Rh7CG100000 Rh7CG377800 Rh7CG377900 Rh7DG097300 Rh7DG354800
rosa_wichuraiana	Rw0G009410 Rw3G021470 Rw7G008240 Rw7G030530 Rw7G030540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1383
AasI	GACNNNNNNGTC	2 cut(s)	28, 1424
Acc36I	ACCTGC	1 cut(s)	1785
AccB7I	CCANNNNNTGG	1 cut(s)	1811
AccII	CGCG	2 cut(s)	490, 1668
AciI	CCGC	7 cut(s)	68, 194, 305, 618, 1371, 1668, 1777
AclI	AACGTT	1 cut(s)	1683
AclWI	GGATC	7 cut(s)	716, 729, 872, 1118, 1463, 1476, 1628
AcoI	YGGCCR	4 cut(s)	678, 1555, 1652, 1851
AcsI	RAATTY	5 cut(s)	291, 425, 857, 1005, 1613
AcuI	CTGAAG	3 cut(s)	761, 1037, 1266
AfaI	GTAC	3 cut(s)	329, 584, 1548
AfiI	CCNNNNNNNGG	3 cut(s)	1071, 1168, 1811
AflIII	ACRYGT	1 cut(s)	1423
AhdI	GACNNNNNGTC	1 cut(s)	939
AjiI	CACGTC	1 cut(s)	1645
AjnI	CCWGG	3 cut(s)	529, 1360, 1702
AluBI	AGCT	2 cut(s)	993, 1015
AluI	AGCT	2 cut(s)	993, 1015
Alw21I	GWGCWC	1 cut(s)	219
Alw26I	GTCTC	4 cut(s)	14, 703, 905, 1450
Alw44I	GTGCAC	1 cut(s)	215
AlwI	GGATC	7 cut(s)	716, 729, 872, 1118, 1463, 1476, 1628
AoxI	GGCC	8 cut(s)	623, 678, 760, 1159, 1555, 1652, 1851, 1863
ApaLI	GTGCAC	1 cut(s)	215
ApeKI	GCWGC	2 cut(s)	485, 1289
ApoI	RAATTY	5 cut(s)	291, 425, 857, 1005, 1613
Asp700I	GAANNNNTTC	4 cut(s)	183, 294, 429, 1218
AspLEI	GCGC	2 cut(s)	490, 1668
AspS9I	GGNCC	8 cut(s)	131, 242, 353, 533, 761, 1160, 1417, 1700
AvaII	GGWCC	6 cut(s)	131, 242, 353, 533, 1417, 1700
AxyI	CCTNAGG	1 cut(s)	627
BaeGI	GKGCMC	1 cut(s)	219
BalI	TGGCCA	3 cut(s)	680, 1654, 1853
BamHI	GGATCC	2 cut(s)	721, 1468
BanII	GRGCYC	1 cut(s)	1605
BauI	CACGAG	1 cut(s)	1824
BbsI	GAAGAC	2 cut(s)	1038, 1211
Bbv12I	GWGCWC	1 cut(s)	219
BbvI	GCAGC	2 cut(s)	472, 1276
BceAI	ACGGC	1 cut(s)	1542
BcgI	CGANNNNNNTGC	2 cut(s)	134, 168
BciT130I	CCWGG	3 cut(s)	531, 1362, 1704
BclI	TGATCA	1 cut(s)	1317
BcoDI	GTCTC	4 cut(s)	14, 703, 905, 1450
BfaI	CTAG	3 cut(s)	1712, 1782, 1867
BfmI	CTRYAG	3 cut(s)	55, 463, 1232
BfuAI	ACCTGC	1 cut(s)	1785
BisI	GCNGC	5 cut(s)	486, 618, 1290, 1371, 1669
BlsI	GCNGC	5 cut(s)	487, 619, 1291, 1372, 1670
BmcAI	AGTACT	1 cut(s)	1548
Bme1390I	CCNGG	3 cut(s)	531, 1362, 1704
Bme18I	GGWCC	6 cut(s)	131, 242, 353, 533, 1417, 1700
BmeRI	GACNNNNNGTC	1 cut(s)	939
BmgBI	CACGTC	1 cut(s)	1645
BmgT120I	GGNCC	8 cut(s)	131, 242, 353, 533, 761, 1160, 1417, 1700
BmrFI	CCNGG	3 cut(s)	531, 1362, 1704
BmsI	GCATC	2 cut(s)	516, 776
BoxI	GACNNNNGTC	1 cut(s)	1769
BpiI	GAAGAC	2 cut(s)	1038, 1211
BpmI	CTGGAG	2 cut(s)	285, 1725
BpuEI	CTTGAG	2 cut(s)	503, 737
Bsa29I	ATCGAT	1 cut(s)	1106
BsaAI	YACGTR	1 cut(s)	1658
BsaBI	GATNNNNATC	2 cut(s)	672, 879
BsaJI	CCNNGG	1 cut(s)	1361
Bsc4I	CCNNNNNNNGG	3 cut(s)	1071, 1168, 1811
Bse1I	ACTGG	1 cut(s)	480
Bse21I	CCTNAGG	1 cut(s)	627
Bse8I	GATNNNNATC	2 cut(s)	672, 879
BseBI	CCWGG	3 cut(s)	531, 1362, 1704
BseCI	ATCGAT	1 cut(s)	1106
BseDI	CCNNGG	1 cut(s)	1361
BseGI	GGATG	7 cut(s)	168, 279, 390, 880, 1117, 1575, 1852
BseJI	GATNNNNATC	2 cut(s)	672, 879
BseLI	CCNNNNNNNGG	3 cut(s)	1071, 1168, 1811
BseMII	CTCAG	5 cut(s)	618, 1008, 1025, 1320, 1617
BseNI	ACTGG	1 cut(s)	480
BseRI	GAGGAG	2 cut(s)	54, 1643
BseSI	GKGCMC	1 cut(s)	219
BseXI	GCAGC	2 cut(s)	472, 1276
BseYI	CCCAGC	2 cut(s)	763, 1463
Bsh1236I	CGCG	2 cut(s)	490, 1668
BshFI	GGCC	8 cut(s)	625, 680, 762, 1161, 1557, 1654, 1853, 1865
BshVI	ATCGAT	1 cut(s)	1106
BsiHKAI	GWGCWC	1 cut(s)	219
BsiSI	CCGG	2 cut(s)	71, 191
BslFI	GGGAC	5 cut(s)	144, 255, 366, 1378, 1713
BslI	CCNNNNNNNGG	3 cut(s)	1071, 1168, 1811
BsmAI	GTCTC	4 cut(s)	14, 703, 905, 1450
BsmBI	CGTCTC	1 cut(s)	14
BsmFI	GGGAC	5 cut(s)	144, 255, 366, 1378, 1713
BsmI	GAATGC	3 cut(s)	1151, 1188, 1341
BsnI	GGCC	8 cut(s)	625, 680, 762, 1161, 1557, 1654, 1853, 1865
Bsp1286I	GDGCHC	2 cut(s)	219, 1605
Bsp1407I	TGTACA	1 cut(s)	327
Bsp143I	GATC	8 cut(s)	667, 721, 864, 1114, 1123, 1317, 1468, 1620
BspACI	CCGC	7 cut(s)	68, 194, 305, 618, 1371, 1668, 1777
BspANI	GGCC	8 cut(s)	625, 680, 762, 1161, 1557, 1654, 1853, 1865
BspCNI	CTCAG	5 cut(s)	619, 1007, 1024, 1319, 1618
BspDI	ATCGAT	1 cut(s)	1106
BspFNI	CGCG	2 cut(s)	490, 1668
BspMI	ACCTGC	1 cut(s)	1785
BspPI	GGATC	7 cut(s)	716, 729, 872, 1118, 1463, 1476, 1628
BsrGI	TGTACA	1 cut(s)	327
BsrI	ACTGG	1 cut(s)	480
BssECI	CCNNGG	1 cut(s)	1361
BssMI	GATC	8 cut(s)	667, 721, 864, 1114, 1123, 1317, 1468, 1620
BssSI	CACGAG	1 cut(s)	1824
Bst2BI	CACGAG	1 cut(s)	1824
Bst2UI	CCWGG	3 cut(s)	531, 1362, 1704
Bst4CI	ACNGT	9 cut(s)	47, 152, 263, 374, 1037, 1202, 1285, 1693, 1740
Bst6I	CTCTTC	2 cut(s)	908, 1185
BstAUI	TGTACA	1 cut(s)	327
BstBAI	YACGTR	1 cut(s)	1658
BstC8I	GCNNGC	3 cut(s)	557, 692, 1779
BstDEI	CTNAG	7 cut(s)	627, 994, 1011, 1306, 1533, 1626, 1672
BstENI	CCTNNNNNAGG	1 cut(s)	1069
BstF5I	GGATG	7 cut(s)	168, 279, 390, 880, 1117, 1575, 1852
BstFNI	CGCG	2 cut(s)	490, 1668
BstHHI	GCGC	2 cut(s)	490, 1668
BstKTI	GATC	8 cut(s)	670, 724, 867, 1117, 1126, 1320, 1471, 1623
BstMAI	GTCTC	4 cut(s)	14, 703, 905, 1450
BstMBI	GATC	8 cut(s)	667, 721, 864, 1114, 1123, 1317, 1468, 1620
BstMWI	GCNNNNNNNGC	1 cut(s)	980
BstNI	CCWGG	3 cut(s)	531, 1362, 1704
BstNSI	RCATGY	3 cut(s)	694, 1133, 1427
BstPAI	GACNNNNGTC	1 cut(s)	1769
BstSCI	CCNGG	3 cut(s)	529, 1360, 1702
BstSFI	CTRYAG	3 cut(s)	55, 463, 1232
BstSLI	GKGCMC	1 cut(s)	219
BstUI	CGCG	2 cut(s)	490, 1668
BstV1I	GCAGC	2 cut(s)	472, 1276
BstV2I	GAAGAC	2 cut(s)	1038, 1211
BstX2I	RGATCY	2 cut(s)	721, 1468
BstYI	RGATCY	2 cut(s)	721, 1468
Bsu15I	ATCGAT	1 cut(s)	1106
Bsu36I	CCTNAGG	1 cut(s)	627
BsuRI	GGCC	8 cut(s)	625, 680, 762, 1161, 1557, 1654, 1853, 1865
BsuTUI	ATCGAT	1 cut(s)	1106
BtgZI	GCGATG	1 cut(s)	696
BtrI	CACGTC	1 cut(s)	1645
BtsCI	GGATG	7 cut(s)	168, 279, 390, 880, 1117, 1575, 1852
BtsIMutI	CAGTG	8 cut(s)	148, 259, 370, 473, 1281, 1479, 1623, 1745
BveI	ACCTGC	1 cut(s)	1785
Cac8I	GCNNGC	3 cut(s)	557, 692, 1779
CfoI	GCGC	2 cut(s)	490, 1668
Cfr13I	GGNCC	8 cut(s)	131, 242, 353, 533, 761, 1160, 1417, 1700
ClaI	ATCGAT	1 cut(s)	1106
Csp6I	GTAC	3 cut(s)	328, 583, 1547
CspCI	CAANNNNNGTGG	2 cut(s)	504, 539
CviAII	CATG	9 cut(s)	109, 621, 663, 691, 1130, 1424, 1438, 1774, 1855
CviQI	GTAC	3 cut(s)	328, 583, 1547
DdeI	CTNAG	7 cut(s)	627, 994, 1011, 1306, 1533, 1626, 1672
DpnI	GATC	8 cut(s)	669, 723, 866, 1116, 1125, 1319, 1470, 1622
DpnII	GATC	8 cut(s)	667, 721, 864, 1114, 1123, 1317, 1468, 1620
DraI	TTTAAA	1 cut(s)	756
DrdI	GACNNNNNNGTC	2 cut(s)	28, 1424
DriI	GACNNNNNGTC	1 cut(s)	939
DseDI	GACNNNNNNGTC	2 cut(s)	28, 1424
EaeI	YGGCCR	4 cut(s)	678, 1555, 1652, 1851
Eam1104I	CTCTTC	2 cut(s)	908, 1185
Eam1105I	GACNNNNNGTC	1 cut(s)	939
EarI	CTCTTC	2 cut(s)	908, 1185
EciI	GGCGGA	2 cut(s)	57, 209
Eco147I	AGGCCT	1 cut(s)	1865
Eco24I	GRGCYC	1 cut(s)	1605
Eco32I	GATATC	1 cut(s)	1477
Eco47I	GGWCC	6 cut(s)	131, 242, 353, 533, 1417, 1700
Eco57I	CTGAAG	3 cut(s)	761, 1037, 1266
Eco81I	CCTNAGG	1 cut(s)	627
EcoNI	CCTNNNNNAGG	1 cut(s)	1069
EcoO109I	RGGNCCY	2 cut(s)	1417, 1700
EcoRII	CCWGG	3 cut(s)	529, 1360, 1702
EcoRV	GATATC	1 cut(s)	1477
EcoT38I	GRGCYC	1 cut(s)	1605
Esp3I	CGTCTC	1 cut(s)	14
FaeI	CATG	9 cut(s)	112, 624, 666, 694, 1133, 1427, 1441, 1777, 1858
FaqI	GGGAC	5 cut(s)	144, 255, 366, 1378, 1713
FatI	CATG	9 cut(s)	108, 620, 662, 690, 1129, 1423, 1437, 1773, 1854
FauI	CCCGC	1 cut(s)	1770
FbaI	TGATCA	1 cut(s)	1317
Fnu4HI	GCNGC	5 cut(s)	486, 618, 1290, 1371, 1669
FokI	GGATG	7 cut(s)	155, 266, 377, 887, 1124, 1562, 1859
FriOI	GRGCYC	1 cut(s)	1605
Fsp4HI	GCNGC	5 cut(s)	486, 618, 1290, 1371, 1669
FspBI	CTAG	3 cut(s)	1712, 1782, 1867
GlaI	GCGC	2 cut(s)	489, 1667
GluI	GCNGC	5 cut(s)	486, 618, 1290, 1371, 1669
GsaI	CCCAGC	2 cut(s)	767, 1467
GsuI	CTGGAG	2 cut(s)	285, 1725
HaeIII	GGCC	8 cut(s)	625, 680, 762, 1161, 1557, 1654, 1853, 1865
HapII	CCGG	2 cut(s)	71, 191
HhaI	GCGC	2 cut(s)	490, 1668
Hin1II	CATG	9 cut(s)	112, 624, 666, 694, 1133, 1427, 1441, 1777, 1858
Hin6I	GCGC	2 cut(s)	488, 1666
HinP1I	GCGC	2 cut(s)	488, 1666
HinfI	GANTC	4 cut(s)	29, 410, 673, 1048
HpaII	CCGG	2 cut(s)	71, 191
Hpy166II	GTNNAC	4 cut(s)	217, 328, 583, 1205
Hpy188I	TCNGA	8 cut(s)	121, 343, 672, 1171, 1396, 1724, 1754, 1764
Hpy188III	TCNNGA	5 cut(s)	868, 953, 1118, 1472, 1579
Hpy8I	GTNNAC	4 cut(s)	217, 328, 583, 1205
Hpy99I	CGWCG	4 cut(s)	146, 257, 290, 368
HpyAV	CCTTC	6 cut(s)	865, 1012, 1068, 1391, 1539, 1719
HpyCH4III	ACNGT	9 cut(s)	47, 152, 263, 374, 1037, 1202, 1285, 1693, 1740
HpyCH4IV	ACGT	4 cut(s)	90, 1644, 1657, 1683
HpyCH4V	TGCA	9 cut(s)	106, 217, 436, 690, 694, 1341, 1564, 1640, 1829
HpyF10VI	GCNNNNNNNGC	1 cut(s)	980
HpyF3I	CTNAG	7 cut(s)	627, 994, 1011, 1306, 1533, 1626, 1672
HpySE526I	ACGT	4 cut(s)	90, 1644, 1657, 1683
Hsp92II	CATG	9 cut(s)	112, 624, 666, 694, 1133, 1427, 1441, 1777, 1858
HspAI	GCGC	2 cut(s)	488, 1666
Ksp22I	TGATCA	1 cut(s)	1317
Kzo9I	GATC	8 cut(s)	667, 721, 864, 1114, 1123, 1317, 1468, 1620
LmnI	GCTCC	4 cut(s)	73, 196, 307, 1630
Lsp1109I	GCAGC	2 cut(s)	472, 1276
LweI	GCATC	2 cut(s)	516, 776
MaeI	CTAG	3 cut(s)	1712, 1782, 1867
MaeII	ACGT	4 cut(s)	90, 1644, 1657, 1683
MaeIII	GTNAC	2 cut(s)	976, 1433
MalI	GATC	8 cut(s)	669, 723, 866, 1116, 1125, 1319, 1470, 1622
MboI	GATC	8 cut(s)	667, 721, 864, 1114, 1123, 1317, 1468, 1620
MboII	GAAGA	6 cut(s)	287, 895, 1043, 1202, 1211, 1337
MfeI	CAATTG	1 cut(s)	1515
MflI	RGATCY	2 cut(s)	721, 1468
MhlI	GDGCHC	2 cut(s)	219, 1605
MlsI	TGGCCA	3 cut(s)	680, 1654, 1853
MluNI	TGGCCA	3 cut(s)	680, 1654, 1853
MlyI	GAGTC	1 cut(s)	38
MmeI	TCCRAC	2 cut(s)	1149, 1787
Mox20I	TGGCCA	3 cut(s)	680, 1654, 1853
MroXI	GAANNNNTTC	4 cut(s)	183, 294, 429, 1218
MscI	TGGCCA	3 cut(s)	680, 1654, 1853
MseI	TTAA	6 cut(s)	638, 644, 755, 885, 1272, 1503
Msp20I	TGGCCA	3 cut(s)	680, 1654, 1853
MspA1I	CMGCKG	2 cut(s)	305, 1015
MspI	CCGG	2 cut(s)	71, 191
MspR9I	CCNGG	3 cut(s)	531, 1362, 1704
MunI	CAATTG	1 cut(s)	1515
Mva1269I	GAATGC	3 cut(s)	1151, 1188, 1341
MvaI	CCWGG	3 cut(s)	531, 1362, 1704
MvnI	CGCG	2 cut(s)	490, 1668
MwoI	GCNNNNNNNGC	1 cut(s)	980
NdeII	GATC	8 cut(s)	667, 721, 864, 1114, 1123, 1317, 1468, 1620
NlaIII	CATG	9 cut(s)	112, 624, 666, 694, 1133, 1427, 1441, 1777, 1858
NmuCI	GTSAC	1 cut(s)	976
NspI	RCATGY	3 cut(s)	694, 1133, 1427
PaeI	GCATGC	1 cut(s)	694
PceI	AGGCCT	1 cut(s)	1865
PciI	ACATGT	1 cut(s)	1423
PcsI	WCGNNNNNNNCGW	1 cut(s)	96
PctI	GAATGC	3 cut(s)	1151, 1188, 1341
PdmI	GAANNNNTTC	4 cut(s)	183, 294, 429, 1218
PfeI	GAWTC	3 cut(s)	410, 673, 1048
PflFI	GACNNNGTC	1 cut(s)	1758
PflMI	CCANNNNNTGG	1 cut(s)	1811
PkrI	GCNGC	5 cut(s)	487, 619, 1291, 1372, 1670
PleI	GAGTC	1 cut(s)	37
PpsI	GAGTC	1 cut(s)	37
Ppu21I	YACGTR	1 cut(s)	1658
PpuMI	RGGWCCY	2 cut(s)	1417, 1700
PscI	ACATGT	1 cut(s)	1423
PshAI	GACNNNNGTC	1 cut(s)	1769
PsiI	TTATAA	1 cut(s)	1383
Psp1406I	AACGTT	1 cut(s)	1683
Psp5II	RGGWCCY	2 cut(s)	1417, 1700
Psp6I	CCWGG	3 cut(s)	529, 1360, 1702
PspFI	CCCAGC	2 cut(s)	763, 1463
PspGI	CCWGG	3 cut(s)	529, 1360, 1702
PspPI	GGNCC	8 cut(s)	131, 242, 353, 533, 761, 1160, 1417, 1700
PspPPI	RGGWCCY	2 cut(s)	1417, 1700
PsuI	RGATCY	2 cut(s)	721, 1468
PsyI	GACNNNGTC	1 cut(s)	1758
PvuII	CAGCTG	1 cut(s)	1015
RsaI	GTAC	3 cut(s)	329, 584, 1548
RsaNI	GTAC	3 cut(s)	328, 583, 1547
SaqAI	TTAA	6 cut(s)	638, 644, 755, 885, 1272, 1503
SatI	GCNGC	5 cut(s)	486, 618, 1290, 1371, 1669
Sau3AI	GATC	8 cut(s)	667, 721, 864, 1114, 1123, 1317, 1468, 1620
Sau96I	GGNCC	8 cut(s)	131, 242, 353, 533, 761, 1160, 1417, 1700
ScaI	AGTACT	1 cut(s)	1548
SchI	GAGTC	1 cut(s)	38
ScrFI	CCNGG	3 cut(s)	531, 1362, 1704
SduI	GDGCHC	2 cut(s)	219, 1605
SfaNI	GCATC	2 cut(s)	516, 776
SfcI	CTRYAG	3 cut(s)	55, 463, 1232
SinI	GGWCC	6 cut(s)	131, 242, 353, 533, 1417, 1700
SmlI	CTYRAG	3 cut(s)	518, 716, 1859
SmoI	CTYRAG	3 cut(s)	518, 716, 1859
SphI	GCATGC	1 cut(s)	694
SseBI	AGGCCT	1 cut(s)	1865
SsiI	CCGC	7 cut(s)	68, 194, 305, 618, 1371, 1668, 1777
SspI	AATATT	1 cut(s)	792
SspMI	CTAG	3 cut(s)	1712, 1782, 1867
StuI	AGGCCT	1 cut(s)	1865
StyD4I	CCNGG	3 cut(s)	529, 1360, 1702
TaaI	ACNGT	9 cut(s)	47, 152, 263, 374, 1037, 1202, 1285, 1693, 1740
TaiI	ACGT	4 cut(s)	93, 1647, 1660, 1686
TaqI	TCGA	6 cut(s)	174, 285, 446, 1061, 1106, 1428
TatI	WGTACW	3 cut(s)	327, 582, 1546
TauI	GCSGC	3 cut(s)	620, 1373, 1671
TfiI	GAWTC	3 cut(s)	410, 673, 1048
Tru1I	TTAA	6 cut(s)	638, 644, 755, 885, 1272, 1503
Tru9I	TTAA	6 cut(s)	638, 644, 755, 885, 1272, 1503
TscAI	CASTG	8 cut(s)	155, 266, 377, 480, 1288, 1486, 1630, 1745
TseFI	GTSAC	1 cut(s)	976
TseI	GCWGC	2 cut(s)	485, 1289
Tsp45I	GTSAC	1 cut(s)	976
TspDTI	ATGAA	8 cut(s)	17, 192, 414, 455, 468, 651, 1337, 1564
TspGWI	ACGGA	3 cut(s)	32, 1100, 1157
TspRI	CASTG	8 cut(s)	155, 266, 377, 480, 1288, 1486, 1630, 1745
Tth111I	GACNNNGTC	1 cut(s)	1758
Van91I	CCANNNNNTGG	1 cut(s)	1811
VneI	GTGCAC	1 cut(s)	215
VpaK11BI	GGWCC	6 cut(s)	131, 242, 353, 533, 1417, 1700
XagI	CCTNNNNNAGG	1 cut(s)	1069
XapI	RAATTY	5 cut(s)	291, 425, 857, 1005, 1613
XceI	RCATGY	3 cut(s)	694, 1133, 1427
XmnI	GAANNNNTTC	4 cut(s)	183, 294, 429, 1218
XspI	CTAG	3 cut(s)	1712, 1782, 1867
ZrmI	AGTACT	1 cut(s)	1548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.