Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001762

Physical Location & Seq

Genomic Coordinates Reverse (-)

47258634 .. 47276367

Gene Structure 17734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG354800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGCCGTCGATGATGACTTGTTGGTGAATCCTAAGCCGATGATGGAGGAGCCACTGGTCGACTACCGAGTTTATCCGATCCCCGATACAGTCCCAGATGAAAATTTGGAAAAATATTTTCAGAACGCGAAATCGAAATTAGAAAAGTATCGCATGACAATCACTCTGAATGCGGCTGAGCGAACCCTCACATTCGTACAAGGGGTAAGTAAGTGGAACCCTGGCCCTGTCTTGAACAAATATGGCAAGTTTGAAATCACCACTTTCACTGTGCCCTTCCCTGAAAATCGAGCAACAAAGTTGAAACATGTTTGGCCCGACGTCGAAGAATTCTTGTATGAGTTTGCCATTTCATGCAATCTCAATTTGGCTGAGTGTTCCATGCAAGTCTCAACAACCACATTTCTTGATAGACAGTATCTCCTTGACAGAGCTAGACATCTCCTTCAACTGTTGTCCACAAGTCTTGTTCCGCCATATATGGCATTAGAAATATTCCAAGGCAGCAGGCAACATGAAATCATGGAGATAGGAGATCAGCAGGGGGGGCTTTGCACAAAATTTGGGGTCAAGAAGGGGGAATATCTTAAACGATGGGAATGCCTCTTCTACTCCCTAAAGGCACTTTCAAAAGCAACACAATGTCATATCTTTCTTAACGAGAACACTTTTACTGCTGTGACTGCTGTGGAGAATACAGTTGAAAGAATTTCATGGCTCAGGTCAGTTGTGGGAGACTGCATCACCAAAAATTTGTGTCCTGCAACCTCTATCAGGAAGTTTGGAAATGAATTTGGAATGCATCAATCGATGGATGATCTTGAGGATCCACATGCCAAGCACATGGAGATGGTGAGGTCTGCCCCTTTTTTTCTCAGAGATAGCATGCCTGAAGTCTGCTCTCTCTATACGTTACTCCATGAAAAACGAGCAGCAAAGTTGCTAGAAGCTTCGTCGATGCTGGAGTCTTCCCTAAGTAACTATGGCATTTCATGTACTCTGGAGAAGGATTCCATGGCATTCACAACAACGAGATGTACTAATGAGCCAGATATCATTGACAAGGCTTTCCAGCTACTTGAACTTCTGTCAACAACTCATGTTCCAGTATCTCTGGCAATAGAAATATTGGATGGTAGTATGCAAACTTGCGTAATTAAAATTGGGAATCAAGAAGGTGGGATTTGCTCAGACTTTGGGATCAGTGAGGAGGAATACCTTATACGATGGGAATGTCTTCGCCACTCCCTACAGGCAGTTGCCGAAACGGCGGAATGTAATGTATTTCTCAACTATTACACTGTTGCTGCTGTGGGGAATACTTCACTAGAATTGTTCAAGCAGTCAGTGGGAAACTGCTTTCTTCATAATCTGTGTCCTGGGACTGTTTGCACGGATTATAATTCTGCATCACGAGGGCTGGAAAATATTGAAGATCCACACATCAAGCACATGGAGATGGAAAAATCGGGGTCGTCGTTGCACATGCTTGAAGTCAGCTCCTTCTGTACATTCTTTTCGCAACTACAAGCAACTCAGTTGTATGATAATTGGTCAATTGTGGAATCGTGTTTACAAAAGCATGACATTTCGTGCAAACTGGTTGTGGCCGAGTTTTACATGACAGTGTCTGTAACCACAAAGGCCGGGGAATCAAATATTAGTGACAAGATTTTGGACGTTCTTAAACTTTTATCAGTTGGTATTCTACCTTCTAAGGCAATACAAGTGCTGGAAGGCAGTATGTACTATGACTTCATCCGGACAGGGTCTCAGTATGGCGGGTTTTGCTTAAAATATGGGATCACCAAGACAAATCTTATTACTGTCTGCGGTCCGCATGAACAAATGGATGAATTCAGCAAGTTTGTTCAATGTTGCTTTGATTGGAGGCGTCAACCGACTTGTGCAATGGGAGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00590 ko00790 ko00980 ko01100 ko05204 map00590 map00790 map00980 map01100 map05204

Pfam Domains

Protein Families

adh_short

Protein Analysis

640

Amino Acids

72.38

Weight (kDa)

5.3

Isoelectric Point (pI)

48.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_KRR1_1st	PF17903	88 - 156	1.9e-08	Krr1 KH1 domain
KH_KRR1_1st	PF17903	500 - 579	3e-06	Krr1 KH1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001762)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g09741 FvH4_5g09770 FvH4_5g09780 FvH4_5g31341
rosa_chinensis	RchiOBHm_Chr3g0481091 RchiOBHm_Chr7g0188481 RchiOBHm_Chr7g0223281
rosa_laevigata	RLG00000001991 RLG00000004692 RLG00000023421
rosa_multiflora	Rmu_co8285797.1_g000001 Rmu_sc0001551.1_g000022 Rmu_sc0001576.1_g000004 Rmu_sc0005124.1_g000010 Rmu_sc0016427.1_g000002 Rmu_sc0021207.1_g000004 Rmu_sc0021207.1_g000006
rosa_roxburghii	Rroxscaffold_3G00235960 Rroxscaffold_3G00266380 Rroxscaffold_6G00400650
rosa_rugosa	Rorug03G0190200 Rorug03G0190300 Rorug03G0190400 Rorug06G0490800 Rorug07G0213900 Rorug07G0215700
rosa_samantha	Rh3AG240500 Rh3BG276100 Rh3BG276200 Rh3CG271400 Rh3CG271500 Rh3DG267600 Rh5CG142200 Rh7AG359300 Rh7AG359400 Rh7AG359500 Rh7BG347300 Rh7CG097800 Rh7CG100000 Rh7CG377800 Rh7CG377900 Rh7DG097300 Rh7DG354800
rosa_wichuraiana	Rw0G009410 Rw3G021470 Rw7G008240 Rw7G030530 Rw7G030540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1401
AatII	GACGTC	1 cut(s)	324
AccI	GTMKAC	1 cut(s)	60
AccII	CGCG	1 cut(s)	128
AccIII	TCCGGA	1 cut(s)	1761
AciI	CCGC	6 cut(s)	173, 473, 1271, 1782, 1833, 1838
AclWI	GGATC	6 cut(s)	73, 821, 834, 1208, 1430, 1811
AcoI	YGGCCR	2 cut(s)	3, 1608
AcsI	RAATTY	7 cut(s)	103, 329, 560, 708, 751, 791, 1856
AcuI	CTGAAG	1 cut(s)	912
AcyI	GRCGYC	2 cut(s)	321, 1894
AfaI	GTAC	5 cut(s)	198, 997, 1039, 1510, 1748
AfiI	CCNNNNNNNGG	1 cut(s)	774
AflIII	ACRYGT	1 cut(s)	307
AjnI	CCWGG	2 cut(s)	220, 1378
AluBI	AGCT	4 cut(s)	434, 950, 1075, 1500
AluI	AGCT	4 cut(s)	434, 950, 1075, 1500
Alw26I	GTCTC	3 cut(s)	394, 729, 1776
AlwI	GGATC	6 cut(s)	73, 821, 834, 1208, 1430, 1811
AlwNI	CAGNNNCTG	1 cut(s)	1631
Aor13HI	TCCGGA	1 cut(s)	1761
AoxI	GGCC	5 cut(s)	3, 223, 314, 1608, 1644
ApeKI	GCWGC	3 cut(s)	504, 932, 1307
ApoI	RAATTY	7 cut(s)	103, 329, 560, 708, 751, 791, 1856
Asp700I	GAANNNNTTC	1 cut(s)	1236
AspS9I	GGNCC	3 cut(s)	224, 315, 1835
AsuC2I	CCSGG	1 cut(s)	1648
AsuHPI	GGTGA	5 cut(s)	37, 250, 736, 865, 1798
AvaII	GGWCC	1 cut(s)	1835
BaeGI	GKGCMC	1 cut(s)	276
BamHI	GGATCC	1 cut(s)	826
BarI	GAAGNNNNNNTAC	4 cut(s)	1696, 1728, 1739, 1771
BauI	CACGAG	1 cut(s)	1413
BbsI	GAAGAC	2 cut(s)	960, 1229
BbvI	GCAGC	3 cut(s)	516, 944, 1294
BccI	CCATC	7 cut(s)	37, 588, 805, 844, 1127, 1221, 1453
BceAI	ACGGC	1 cut(s)	1284
BcgI	CGANNNNNNTGC	2 cut(s)	582, 616
BciT130I	CCWGG	2 cut(s)	222, 1380
BcnI	CCSGG	1 cut(s)	1648
BcoDI	GTCTC	3 cut(s)	394, 729, 1776
BfaI	CTAG	3 cut(s)	435, 944, 1328
BfmI	CTRYAG	1 cut(s)	1250
BglI	GCCNNNNNGGC	1 cut(s)	1268
BisI	GCNGC	4 cut(s)	174, 505, 933, 1308
BlpI	GCTNAGC	1 cut(s)	177
BlsI	GCNGC	4 cut(s)	175, 506, 934, 1309
Bme1390I	CCNGG	3 cut(s)	222, 1380, 1648
Bme18I	GGWCC	1 cut(s)	1835
BmgT120I	GGNCC	3 cut(s)	224, 315, 1835
BmiI	GGNNCC	3 cut(s)	51, 218, 828
BmrFI	CCNGG	3 cut(s)	222, 1380, 1648
BmsI	GCATC	4 cut(s)	750, 811, 948, 1418
BpiI	GAAGAC	2 cut(s)	960, 1229
BpmI	CTGGAG	2 cut(s)	983, 1022
Bpu10I	CCTNAGC	2 cut(s)	33, 719
Bpu1102I	GCTNAGC	1 cut(s)	177
BpuEI	CTTGAG	1 cut(s)	842
BpuMI	CCSGG	1 cut(s)	1648
Bsa29I	ATCGAT	1 cut(s)	809
BsaHI	GRCGYC	2 cut(s)	321, 1894
BsaI	GGTCTC	1 cut(s)	1776
BsaJI	CCNNGG	5 cut(s)	220, 499, 1014, 1379, 1647
BsaWI	WCCGGW	1 cut(s)	1761
BsaXI	ACNNNNNCTCC	2 cut(s)	405, 435
Bsc4I	CCNNNNNNNGG	1 cut(s)	774
Bse1I	ACTGG	3 cut(s)	60, 1106, 1605
Bse3DI	GCAATG	1 cut(s)	1917
BseAI	TCCGGA	1 cut(s)	1761
BseBI	CCWGG	2 cut(s)	222, 1380
BseCI	ATCGAT	1 cut(s)	809
BseDI	CCNNGG	5 cut(s)	220, 499, 1014, 1379, 1647
BseGI	GGATG	4 cut(s)	820, 1138, 1758, 1858
BseLI	CCNNNNNNNGG	1 cut(s)	774
BseMI	GCAATG	1 cut(s)	1917
BseMII	CTCAG	7 cut(s)	168, 363, 733, 889, 1203, 1550, 1787
BseNI	ACTGG	3 cut(s)	60, 1106, 1605
BseRI	GAGGAG	2 cut(s)	62, 1223
BseSI	GKGCMC	1 cut(s)	276
BseXI	GCAGC	3 cut(s)	516, 944, 1294
Bsh1236I	CGCG	1 cut(s)	128
BshFI	GGCC	5 cut(s)	5, 225, 316, 1610, 1646
BshVI	ATCGAT	1 cut(s)	809
BsiSI	CCGG	2 cut(s)	1647, 1762
BslFI	GGGAC	2 cut(s)	77, 1396
BslI	CCNNNNNNNGG	1 cut(s)	774
BsmAI	GTCTC	3 cut(s)	394, 729, 1776
BsmFI	GGGAC	2 cut(s)	77, 1396
BsmI	GAATGC	4 cut(s)	175, 605, 804, 1019
BsnI	GGCC	5 cut(s)	5, 225, 316, 1610, 1646
Bso31I	GGTCTC	1 cut(s)	1776
Bsp1286I	GDGCHC	1 cut(s)	276
Bsp13I	TCCGGA	1 cut(s)	1761
Bsp1407I	TGTACA	1 cut(s)	1508
Bsp143I	GATC	7 cut(s)	78, 535, 817, 826, 1200, 1435, 1803
Bsp1720I	GCTNAGC	1 cut(s)	177
Bsp19I	CCATGG	1 cut(s)	1014
BspACI	CCGC	6 cut(s)	173, 473, 1271, 1782, 1833, 1838
BspANI	GGCC	5 cut(s)	5, 225, 316, 1610, 1646
BspCNI	CTCAG	7 cut(s)	169, 364, 732, 888, 1202, 1549, 1786
BspDI	ATCGAT	1 cut(s)	809
BspEI	TCCGGA	1 cut(s)	1761
BspFNI	CGCG	1 cut(s)	128
BspLI	GGNNCC	3 cut(s)	51, 218, 828
BspPI	GGATC	6 cut(s)	73, 821, 834, 1208, 1430, 1811
BspTNI	GGTCTC	1 cut(s)	1776
BsrDI	GCAATG	1 cut(s)	1917
BsrGI	TGTACA	1 cut(s)	1508
BsrI	ACTGG	3 cut(s)	60, 1106, 1605
BssECI	CCNNGG	5 cut(s)	220, 499, 1014, 1379, 1647
BssMI	GATC	7 cut(s)	78, 535, 817, 826, 1200, 1435, 1803
BssNI	GRCGYC	2 cut(s)	321, 1894
BssSI	CACGAG	1 cut(s)	1413
BssT1I	CCWWGG	2 cut(s)	499, 1014
Bst2BI	CACGAG	1 cut(s)	1413
Bst2UI	CCWGG	2 cut(s)	222, 1380
Bst4CI	ACNGT	9 cut(s)	91, 271, 417, 453, 700, 1303, 1387, 1627, 1828
Bst6I	CTCTTC	1 cut(s)	611
BstACI	GRCGYC	2 cut(s)	321, 1894
BstAUI	TGTACA	1 cut(s)	1508
BstC8I	GCNNGC	2 cut(s)	509, 887
BstDSI	CCRYGG	1 cut(s)	1014
BstENI	CCTNNNNNAGG	1 cut(s)	772
BstF5I	GGATG	4 cut(s)	820, 1138, 1758, 1858
BstFNI	CGCG	1 cut(s)	128
BstKTI	GATC	7 cut(s)	81, 538, 820, 829, 1203, 1438, 1806
BstMAI	GTCTC	3 cut(s)	394, 729, 1776
BstMBI	GATC	7 cut(s)	78, 535, 817, 826, 1200, 1435, 1803
BstMWI	GCNNNNNNNGC	4 cut(s)	547, 683, 1268, 1788
BstNI	CCWGG	2 cut(s)	222, 1380
BstNSI	RCATGY	4 cut(s)	311, 836, 889, 1489
BstSCI	CCNGG	3 cut(s)	220, 1378, 1646
BstSFI	CTRYAG	1 cut(s)	1250
BstSLI	GKGCMC	1 cut(s)	276
BstUI	CGCG	1 cut(s)	128
BstV1I	GCAGC	3 cut(s)	516, 944, 1294
BstV2I	GAAGAC	2 cut(s)	960, 1229
BstX2I	RGATCY	2 cut(s)	826, 1435
BstXI	CCANNNNNNTGG	1 cut(s)	844
BstYI	RGATCY	2 cut(s)	826, 1435
Bsu15I	ATCGAT	1 cut(s)	809
BsuRI	GGCC	5 cut(s)	5, 225, 316, 1610, 1646
BsuTUI	ATCGAT	1 cut(s)	809
BtgI	CCRYGG	1 cut(s)	1014
BtsCI	GGATG	4 cut(s)	820, 1138, 1758, 1858
BtsIMutI	CAGTG	6 cut(s)	53, 267, 1210, 1299, 1353, 1632
Cac8I	GCNNGC	2 cut(s)	509, 887
CaiI	CAGNNNCTG	1 cut(s)	1631
Cfr13I	GGNCC	3 cut(s)	224, 315, 1835
ClaI	ATCGAT	1 cut(s)	809
CpoI	CGGWCCG	1 cut(s)	1835
CseI	GACGC	1 cut(s)	1883
Csp6I	GTAC	5 cut(s)	197, 996, 1038, 1509, 1747
CspCI	CAANNNNNGTGG	4 cut(s)	388, 423, 448, 483
CspI	CGGWCCG	1 cut(s)	1835
CviQI	GTAC	5 cut(s)	197, 996, 1038, 1509, 1747
DpnI	GATC	7 cut(s)	80, 537, 819, 828, 1202, 1437, 1805
DpnII	GATC	7 cut(s)	78, 535, 817, 826, 1200, 1435, 1803
EaeI	YGGCCR	2 cut(s)	3, 1608
Eam1104I	CTCTTC	1 cut(s)	611
EarI	CTCTTC	1 cut(s)	611
EciI	GGCGGA	2 cut(s)	462, 1286
Eco130I	CCWWGG	2 cut(s)	499, 1014
Eco31I	GGTCTC	1 cut(s)	1776
Eco32I	GATATC	1 cut(s)	1054
Eco47I	GGWCC	1 cut(s)	1835
Eco57I	CTGAAG	1 cut(s)	912
EcoNI	CCTNNNNNAGG	1 cut(s)	772
EcoRI	GAATTC	2 cut(s)	329, 1856
EcoRII	CCWGG	2 cut(s)	220, 1378
EcoRV	GATATC	1 cut(s)	1054
EcoT14I	CCWWGG	2 cut(s)	499, 1014
EcoT22I	ATGCAT	1 cut(s)	804
ErhI	CCWWGG	2 cut(s)	499, 1014
FaqI	GGGAC	2 cut(s)	77, 1396
FauI	CCCGC	1 cut(s)	1775
FblI	GTMKAC	1 cut(s)	60
Fnu4HI	GCNGC	4 cut(s)	174, 505, 933, 1308
FokI	GGATG	4 cut(s)	827, 1145, 1745, 1865
Fsp4HI	GCNGC	4 cut(s)	174, 505, 933, 1308
FspBI	CTAG	3 cut(s)	435, 944, 1328
GluI	GCNGC	4 cut(s)	174, 505, 933, 1308
GsuI	CTGGAG	2 cut(s)	983, 1022
HaeIII	GGCC	5 cut(s)	5, 225, 316, 1610, 1646
HapII	CCGG	2 cut(s)	1647, 1762
HgaI	GACGC	1 cut(s)	1883
Hin1I	GRCGYC	2 cut(s)	321, 1894
HincII	GTYRAC	3 cut(s)	61, 1092, 1898
HindII	GTYRAC	3 cut(s)	61, 1092, 1898
HindIII	AAGCTT	1 cut(s)	948
HinfI	GANTC	6 cut(s)	28, 965, 1010, 1168, 1565, 1652
HpaII	CCGG	2 cut(s)	1647, 1762
HphI	GGTGA	5 cut(s)	37, 250, 736, 865, 1798
Hpy166II	GTNNAC	5 cut(s)	61, 459, 1092, 1574, 1898
Hpy188I	TCNGA	5 cut(s)	78, 123, 168, 878, 1192
Hpy188III	TCNNGA	9 cut(s)	232, 407, 571, 775, 821, 1001, 1172, 1413, 1762
Hpy8I	GTNNAC	5 cut(s)	61, 459, 1092, 1574, 1898
Hpy99I	CGWCG	5 cut(s)	11, 323, 326, 958, 1480
HpyAV	CCTTC	8 cut(s)	286, 455, 568, 1000, 1169, 1513, 1722, 1730
HpyCH4III	ACNGT	9 cut(s)	91, 271, 417, 453, 700, 1303, 1387, 1627, 1828
HpyCH4IV	ACGT	3 cut(s)	321, 911, 1680
HpyF10VI	GCNNNNNNNGC	4 cut(s)	547, 683, 1268, 1788
HpySE526I	ACGT	3 cut(s)	321, 911, 1680
Hsp92I	GRCGYC	2 cut(s)	321, 1894
Kpn2I	TCCGGA	1 cut(s)	1761
Kzo9I	GATC	7 cut(s)	78, 535, 817, 826, 1200, 1435, 1803
LmnI	GCTCC	2 cut(s)	49, 1505
Lsp1109I	GCAGC	3 cut(s)	516, 944, 1294
LweI	GCATC	4 cut(s)	750, 811, 948, 1418
MaeI	CTAG	3 cut(s)	435, 944, 1328
MaeII	ACGT	3 cut(s)	321, 911, 1680
MaeIII	GTNAC	5 cut(s)	679, 912, 977, 1633, 1664
MalI	GATC	7 cut(s)	80, 537, 819, 828, 1202, 1437, 1805
MboI	GATC	7 cut(s)	78, 535, 817, 826, 1200, 1435, 1803
MboII	GAAGA	6 cut(s)	338, 598, 960, 1229, 1355, 1445
MfeI	CAATTG	1 cut(s)	1557
MflI	RGATCY	2 cut(s)	826, 1435
MhlI	GDGCHC	1 cut(s)	276
MlyI	GAGTC	1 cut(s)	974
Mph1103I	ATGCAT	1 cut(s)	804
MroI	TCCGGA	1 cut(s)	1761
MroXI	GAANNNNTTC	1 cut(s)	1236
MseI	TTAA	5 cut(s)	588, 657, 1158, 1686, 1793
MslI	CAYNNNNRTG	3 cut(s)	848, 1457, 1625
MspI	CCGG	2 cut(s)	1647, 1762
MspR9I	CCNGG	3 cut(s)	222, 1380, 1648
MunI	CAATTG	1 cut(s)	1557
Mva1269I	GAATGC	4 cut(s)	175, 605, 804, 1019
MvaI	CCWGG	2 cut(s)	222, 1380
MvnI	CGCG	1 cut(s)	128
MwoI	GCNNNNNNNGC	4 cut(s)	547, 683, 1268, 1788
NciI	CCSGG	1 cut(s)	1648
NcoI	CCATGG	1 cut(s)	1014
NdeII	GATC	7 cut(s)	78, 535, 817, 826, 1200, 1435, 1803
NlaIV	GGNNCC	3 cut(s)	51, 218, 828
NmeAIII	GCCGAG	1 cut(s)	1636
NmuCI	GTSAC	2 cut(s)	679, 1664
NsiI	ATGCAT	1 cut(s)	804
NspI	RCATGY	4 cut(s)	311, 836, 889, 1489
PaeI	GCATGC	1 cut(s)	889
PciI	ACATGT	1 cut(s)	307
PcsI	WCGNNNNNNNCGW	1 cut(s)	1475
PctI	GAATGC	4 cut(s)	175, 605, 804, 1019
PdmI	GAANNNNTTC	1 cut(s)	1236
PfeI	GAWTC	5 cut(s)	28, 1010, 1168, 1565, 1652
PflFI	GACNNNGTC	2 cut(s)	1627, 1768
PkrI	GCNGC	4 cut(s)	175, 506, 934, 1309
PleI	GAGTC	1 cut(s)	973
PpsI	GAGTC	1 cut(s)	973
PscI	ACATGT	1 cut(s)	307
PsiI	TTATAA	1 cut(s)	1401
Psp6I	CCWGG	2 cut(s)	220, 1378
PspGI	CCWGG	2 cut(s)	220, 1378
PspN4I	GGNNCC	3 cut(s)	51, 218, 828
PspPI	GGNCC	3 cut(s)	224, 315, 1835
PstNI	CAGNNNCTG	1 cut(s)	1631
PsuI	RGATCY	2 cut(s)	826, 1435
PsyI	GACNNNGTC	2 cut(s)	1627, 1768
RsaI	GTAC	5 cut(s)	198, 997, 1039, 1510, 1748
RsaNI	GTAC	5 cut(s)	197, 996, 1038, 1509, 1747
RseI	CAYNNNNRTG	3 cut(s)	848, 1457, 1625
Rsr2I	CGGWCCG	1 cut(s)	1835
RsrII	CGGWCCG	1 cut(s)	1835
SalI	GTCGAC	1 cut(s)	59
SaqAI	TTAA	5 cut(s)	588, 657, 1158, 1686, 1793
SatI	GCNGC	4 cut(s)	174, 505, 933, 1308
Sau3AI	GATC	7 cut(s)	78, 535, 817, 826, 1200, 1435, 1803
Sau96I	GGNCC	3 cut(s)	224, 315, 1835
SchI	GAGTC	1 cut(s)	974
ScrFI	CCNGG	3 cut(s)	222, 1380, 1648
SduI	GDGCHC	1 cut(s)	276
SfaNI	GCATC	4 cut(s)	750, 811, 948, 1418
SfcI	CTRYAG	1 cut(s)	1250
SinI	GGWCC	1 cut(s)	1835
SmiMI	CAYNNNNRTG	3 cut(s)	848, 1457, 1625
SmlI	CTYRAG	1 cut(s)	821
SmoI	CTYRAG	1 cut(s)	821
SphI	GCATGC	1 cut(s)	889
SsiI	CCGC	6 cut(s)	173, 473, 1271, 1782, 1833, 1838
SspI	AATATT	5 cut(s)	116, 495, 1128, 1429, 1660
SspMI	CTAG	3 cut(s)	435, 944, 1328
StyD4I	CCNGG	3 cut(s)	220, 1378, 1646
StyI	CCWWGG	2 cut(s)	499, 1014
TaaI	ACNGT	9 cut(s)	91, 271, 417, 453, 700, 1303, 1387, 1627, 1828
TaiI	ACGT	3 cut(s)	324, 914, 1683
TaqI	TCGA	7 cut(s)	9, 60, 134, 289, 324, 809, 956
TatI	WGTACW	4 cut(s)	995, 1037, 1508, 1746
TauI	GCSGC	1 cut(s)	176
TfiI	GAWTC	5 cut(s)	28, 1010, 1168, 1565, 1652
Tru1I	TTAA	5 cut(s)	588, 657, 1158, 1686, 1793
Tru9I	TTAA	5 cut(s)	588, 657, 1158, 1686, 1793
TscAI	CASTG	6 cut(s)	60, 274, 1210, 1306, 1353, 1632
TseFI	GTSAC	2 cut(s)	679, 1664
TseI	GCWGC	3 cut(s)	504, 932, 1307
Tsp45I	GTSAC	2 cut(s)	679, 1664
TspGWI	ACGGA	1 cut(s)	1409
TspRI	CASTG	6 cut(s)	60, 274, 1210, 1306, 1353, 1632
Tth111I	GACNNNGTC	2 cut(s)	1627, 1768
VpaK11BI	GGWCC	1 cut(s)	1835
XagI	CCTNNNNNAGG	1 cut(s)	772
XapI	RAATTY	7 cut(s)	103, 329, 560, 708, 751, 791, 1856
XceI	RCATGY	4 cut(s)	311, 836, 889, 1489
XmiI	GTMKAC	1 cut(s)	60
XmnI	GAANNNNTTC	1 cut(s)	1236
XspI	CTAG	3 cut(s)	435, 944, 1328
ZraI	GACGTC	1 cut(s)	322
Zsp2I	ATGCAT	1 cut(s)	804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.