Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001392

Physical Location & Seq

Genomic Coordinates Forward (+)

3687611 .. 3691239

Gene Structure 3629 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0047700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGCAGAGGAACCCAGATCAACGGTCACGATCCGCCAAGCCCACCACCATCCATGGCTACGCTCACTCCGGCGACCTTGCTGGGTTGCAGAAGCTGCTCCGGGAAAACCCAGCTCTGCTCAACGAAAGAAACGCCATTATGGTACAAACTCCACTTCATGTTTCTGCTGGTAATAATAGGTCTGACATAGTTAAATTTCTTCTCGATTGGCAAGGGCCGGAAAAGGTTGAGTTGGAAGCCAGAAACATGTATGGTGAAACACCATTACACATGGCAGCAAAGAATGGATGCAATGATGCTGCAAAGTTGCTTCTTGTCCATGGTGCTTTTATTGAAGCCAAAGCAAATAATGGAATGACACCATTACACCTTGCTGTTTGGCATTCACTTCGAGCTGAAGATTTCTCAACTGTTAAAACATTACTTGAGAACAATGCTGATTGCAGTGCCAAGGACGATGAGGGCATGACTCCTTTAAATCACCTTTCAAAAGGCCGTGAAACTGAAAAGTTGCGGGAACTATTACAGTGGCACCTTGAAGAGCAGACAAAAAAAAGGGCAATTCAAGCATGCAGTGAAACTAAAGCTAAGATGGATGAACTTGAAAATGAATTATCAAATATAGTTGGTTTGCAAGAGCTCAAATTACAACTACGCAAGTGGGCAAAAGGGATGCTTTTGGATGAGAGGCGTAAGGCCCTTGGTCTCAAAGTTGGCGTAAGGAGACCCCCTCATATGGCCTTTCTTGGCAATCCTGGAACAGGTAAGACCATGGTAGCTCGTATTCTTGGAAGATTACTTTATATGGTGGGAATTCTACCTACTGACAAAGTAACTGAAGTACAGCGGACAGATTTGGTTGGGGAATTTGTTGGTCATACGGGACCAAAAACTAGGAGGAAGATTAAGGATGCAGAGGGAGGAATTCTTTTTGTAGATGAAGCTTATCGACTGATACCTATGCAGAAGGCAGATGATAAAGACTATGGGTTGGAAGCATTGGAAGAAATCATGTCTGTCATGGACAGTGGAAAGATCGTAGTCATATTTGCTGGATATAGTGAACCAATGAAACGTGTAATTGCTTCGAATGAAGGTTTCTGCAGACGTGTGACCAAGTTTTTCAACTTTAGTGACTTCAGTCCTGAAGATCTAGCAAAGATTCTTCATCTCAAGATGAATAATCAAACAGAGGAGAGCATGTTGTATGGATTTAAGCTACATTCTTTTTGCAGTTTAGAAGCCATTGCAGAACTGATTCAAAGAGGAGCAACAGAAAAGCAGTGTAAGGAGATGAATGGAGGTTTAGTGGATACAATGTTAGTTAATGCTAGAGAGAATTTGGACCTTAGGCTCAATTTTGATTGTATAGACACAGAAGAACTTAGAACAATCACCTTAGAGGATTTACAAGCAGGCCTTCAGATTTTGTCACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006457 GO:0006950 GO:0007275 GO:0007389 GO:0008150 GO:0009266 GO:0009408 GO:0009555 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009880 GO:0009888 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010033 GO:0010229 GO:0010286 GO:0010450 GO:0022414 GO:0032501 GO:0032502 GO:0035266 GO:0040007 GO:0042221 GO:0044424 GO:0044444 GO:0044464 GO:0048229 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048444 GO:0048448 GO:0048466 GO:0048507 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051082 GO:0061458 GO:0065007 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

479

Amino Acids

53.82

Weight (kDa)

6.53

Isoelectric Point (pI)

35.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	18 - 114	1.6e-13	Ankyrin repeats (3 copies)
Ank_5	PF13857	78 - 125	4e-07	Ankyrin repeats (many copies)
Ank_2	PF12796	83 - 152	5.3e-13	Ankyrin repeats (3 copies)
Ank	PF00023	84 - 114	4.8e-06	Ankyrin repeat
Ank_4	PF13637	89 - 129	8.8e-07	Ankyrin repeats (many copies)
AAA	PF00004	247 - 362	3.8e-12	ATPase family associated with various cellular activities (AAA)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42560
fragaria_vesca	FvH4_6g27100 FvH4_6g27100
malus_domestica	MD17G1233000.v1.1
prunus_persica	Prupe.3G123300_v2.0.a1
pyrus_communis	pycom04g10710 pycom09g15870 pycom17g23590
rosa_chinensis	RchiOBHm_Chr2g0128441 RchiOBHm_Chr6g0287441
rosa_laevigata	RLG00000019047 RLG00000030655 RLG00000030661
rosa_multiflora	Rmu_co8518749.1_g000002 Rmu_sc0000208.1_g000002 Rmu_sc0001861.1_g000007 Rmu_sc0002372.1_g000013 Rmu_sc0005742.1_g000010 Rmu_sc0005742.1_g000020
rosa_roxburghii	Rroxscaffold_1G00021770 Rroxscaffold_2G00114920 Rroxscaffold_2G00135280 Rroxscaffold_3G00226510 Rroxscaffold_4G00309740 Rroxscaffold_7G00214810
rosa_rugosa	Rorug02G0047700 Rorug02G0283800 Rorug03G0354300.1 Rorug03G0354400
rosa_samantha	Rh1BG033000 Rh1DG030600 Rh2AG200900 Rh2AG275500 Rh2AG275600 Rh2AG336300 Rh2BG213800 Rh2BG344300 Rh2CG323200 Rh2CG323300 Rh2DG208400 Rh2DG360900 Rh4BG046300 Rh4DG087300 Rh5AG081800 Rh5BG468100 Rh5CG062100 Rh5CG490000 Rh6AG141000 Rh6AG141100 Rh6AG212400
rosa_wichuraiana	Rw0G005740 Rw2G015990 Rw2G027270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	531
AciI	CCGC	3 cut(s)	33, 514, 847
AclWI	GGATC	1 cut(s)	24
AcsI	RAATTY	5 cut(s)	194, 813, 866, 924, 1339
AcuI	CTGAAG	5 cut(s)	417, 858, 1123, 1167, 1406
AfaI	GTAC	2 cut(s)	144, 843
AfiI	CCNNNNNNNGG	2 cut(s)	736, 761
AflIII	ACRYGT	3 cut(s)	246, 1075, 1108
AgsI	TTSAA	7 cut(s)	335, 489, 539, 566, 605, 1126, 1262
AjiI	CACGTC	1 cut(s)	1109
AjnI	CCWGG	1 cut(s)	754
AluBI	AGCT	8 cut(s)	94, 113, 395, 587, 640, 779, 944, 1219
AluI	AGCT	8 cut(s)	94, 113, 395, 587, 640, 779, 944, 1219
Alw21I	GWGCWC	1 cut(s)	642
Alw26I	GTCTC	2 cut(s)	710, 718
AlwI	GGATC	1 cut(s)	24
AlwNI	CAGNNNCTG	1 cut(s)	94
AoxI	GGCC	5 cut(s)	215, 493, 696, 738, 1417
ApeKI	GCWGC	3 cut(s)	94, 275, 299
ApoI	RAATTY	5 cut(s)	194, 813, 866, 924, 1339
Asp700I	GAANNNNTTC	1 cut(s)	1257
AspS9I	GGNCC	4 cut(s)	215, 697, 884, 1345
AsuC2I	CCSGG	1 cut(s)	101
AsuHPI	GGTGA	3 cut(s)	266, 473, 1387
AsuII	TTCGAA	1 cut(s)	1088
AvaII	GGWCC	2 cut(s)	884, 1345
AxyI	CCTNAGG	1 cut(s)	1349
BanI	GGYRCC	1 cut(s)	531
BanII	GRGCYC	1 cut(s)	642
Bbv12I	GWGCWC	1 cut(s)	642
BbvI	GCAGC	3 cut(s)	81, 286, 287
BccI	CCATC	2 cut(s)	56, 586
BceAI	ACGGC	1 cut(s)	480
BcgI	CGANNNNNNTGC	2 cut(s)	371, 405
BciT130I	CCWGG	1 cut(s)	756
BciVI	GTATCC	1 cut(s)	1306
BcnI	CCSGG	1 cut(s)	101
BcoDI	GTCTC	2 cut(s)	710, 718
BfaI	CTAG	3 cut(s)	894, 1154, 1332
BfmI	CTRYAG	1 cut(s)	1102
BfuI	GTATCC	1 cut(s)	1306
BglII	AGATCT	1 cut(s)	1150
BisI	GCNGC	3 cut(s)	95, 276, 300
BlsI	GCNGC	3 cut(s)	96, 277, 301
Bme1390I	CCNGG	2 cut(s)	101, 756
Bme18I	GGWCC	2 cut(s)	884, 1345
BmgBI	CACGTC	1 cut(s)	1109
BmgT120I	GGNCC	4 cut(s)	215, 697, 884, 1345
BmiI	GGNNCC	3 cut(s)	11, 533, 885
BmrFI	CCNGG	2 cut(s)	101, 756
BmsI	GCATC	4 cut(s)	278, 286, 663, 901
BoxI	GACNNNNGTC	1 cut(s)	1140
BplI	GAGNNNNNCTC	2 cut(s)	715, 747
Bpu14I	TTCGAA	1 cut(s)	1088
BpuEI	CTTGAG	2 cut(s)	446, 1157
BpuMI	CCSGG	1 cut(s)	101
BsaI	GGTCTC	2 cut(s)	710, 718
BsaJI	CCNNGG	5 cut(s)	52, 319, 450, 700, 771
BsaXI	ACNNNNNCTCC	6 cut(s)	50, 80, 1187, 1217, 1293, 1323
Bsc4I	CCNNNNNNNGG	2 cut(s)	736, 761
Bse21I	CCTNAGG	1 cut(s)	1349
Bse3DI	GCAATG	2 cut(s)	298, 1245
BseBI	CCWGG	1 cut(s)	756
BseDI	CCNNGG	5 cut(s)	52, 319, 450, 700, 771
BseGI	GGATG	6 cut(s)	48, 293, 601, 678, 688, 916
BseLI	CCNNNNNNNGG	2 cut(s)	736, 761
BseMI	GCAATG	2 cut(s)	298, 1245
BseRI	GAGGAG	2 cut(s)	1208, 1281
BseXI	GCAGC	3 cut(s)	81, 286, 287
BseYI	CCCAGC	2 cut(s)	80, 109
BshFI	GGCC	5 cut(s)	217, 495, 698, 740, 1419
BshNI	GGYRCC	1 cut(s)	531
BsiHKAI	GWGCWC	1 cut(s)	642
BsiSI	CCGG	3 cut(s)	69, 100, 218
BslFI	GGGAC	1 cut(s)	897
BslI	CCNNNNNNNGG	2 cut(s)	736, 761
BsmAI	GTCTC	2 cut(s)	710, 718
BsmFI	GGGAC	1 cut(s)	897
BsmI	GAATGC	1 cut(s)	382
BsnI	GGCC	5 cut(s)	217, 495, 698, 740, 1419
Bso31I	GGTCTC	2 cut(s)	710, 718
Bsp119I	TTCGAA	1 cut(s)	1088
Bsp1286I	GDGCHC	1 cut(s)	642
Bsp143I	GATC	4 cut(s)	16, 29, 1035, 1150
Bsp19I	CCATGG	3 cut(s)	52, 319, 771
BspACI	CCGC	3 cut(s)	33, 514, 847
BspANI	GGCC	5 cut(s)	217, 495, 698, 740, 1419
BspLI	GGNNCC	3 cut(s)	11, 533, 885
BspMAI	CTGCAG	1 cut(s)	1106
BspPI	GGATC	1 cut(s)	24
BspQI	GCTCTTC	1 cut(s)	534
BspT104I	TTCGAA	1 cut(s)	1088
BspT107I	GGYRCC	1 cut(s)	531
BspTNI	GGTCTC	2 cut(s)	710, 718
BsrDI	GCAATG	2 cut(s)	298, 1245
BssECI	CCNNGG	5 cut(s)	52, 319, 450, 700, 771
BssMI	GATC	4 cut(s)	16, 29, 1035, 1150
BssT1I	CCWWGG	5 cut(s)	52, 319, 450, 700, 771
Bst2UI	CCWGG	1 cut(s)	756
Bst4CI	ACNGT	4 cut(s)	24, 412, 528, 1028
Bst6I	CTCTTC	1 cut(s)	534
BstAPI	GCANNNNNTGC	1 cut(s)	94
BstBI	TTCGAA	1 cut(s)	1088
BstC8I	GCNNGC	2 cut(s)	571, 1417
BstDEI	CTNAG	4 cut(s)	588, 1349, 1385, 1399
BstDSI	CCRYGG	3 cut(s)	52, 319, 771
BstENI	CCTNNNNNAGG	1 cut(s)	759
BstF5I	GGATG	6 cut(s)	48, 293, 601, 678, 688, 916
BstKTI	GATC	4 cut(s)	19, 32, 1038, 1153
BstMAI	GTCTC	2 cut(s)	710, 718
BstMBI	GATC	4 cut(s)	16, 29, 1035, 1150
BstMWI	GCNNNNNNNGC	2 cut(s)	94, 566
BstNI	CCWGG	1 cut(s)	756
BstNSI	RCATGY	3 cut(s)	250, 573, 1204
BstPAI	GACNNNNGTC	1 cut(s)	1140
BstSCI	CCNGG	2 cut(s)	99, 754
BstSFI	CTRYAG	1 cut(s)	1102
BstV1I	GCAGC	3 cut(s)	81, 286, 287
BstX2I	RGATCY	1 cut(s)	1150
BstYI	RGATCY	1 cut(s)	1150
Bsu36I	CCTNAGG	1 cut(s)	1349
BsuI	GTATCC	1 cut(s)	1306
BsuRI	GGCC	5 cut(s)	217, 495, 698, 740, 1419
BtgI	CCRYGG	3 cut(s)	52, 319, 771
BtrI	CACGTC	1 cut(s)	1109
BtsCI	GGATG	6 cut(s)	48, 293, 601, 678, 688, 916
BtsI	GCAGTG	3 cut(s)	451, 580, 1289
BtsIMutI	CAGTG	5 cut(s)	451, 533, 580, 1033, 1289
Cac8I	GCNNGC	2 cut(s)	571, 1417
CaiI	CAGNNNCTG	1 cut(s)	94
Cfr13I	GGNCC	4 cut(s)	215, 697, 884, 1345
Csp6I	GTAC	2 cut(s)	143, 842
CviQI	GTAC	2 cut(s)	143, 842
DdeI	CTNAG	4 cut(s)	588, 1349, 1385, 1399
DpnI	GATC	4 cut(s)	18, 31, 1037, 1152
DpnII	GATC	4 cut(s)	16, 29, 1035, 1150
DraI	TTTAAA	1 cut(s)	477
Eam1104I	CTCTTC	1 cut(s)	534
EarI	CTCTTC	1 cut(s)	534
EciI	GGCGGA	1 cut(s)	22
Ecl136II	GAGCTC	1 cut(s)	640
Eco130I	CCWWGG	5 cut(s)	52, 319, 450, 700, 771
Eco147I	AGGCCT	1 cut(s)	1419
Eco24I	GRGCYC	1 cut(s)	642
Eco31I	GGTCTC	2 cut(s)	710, 718
Eco47I	GGWCC	2 cut(s)	884, 1345
Eco53kI	GAGCTC	1 cut(s)	640
Eco57I	CTGAAG	5 cut(s)	417, 858, 1123, 1167, 1406
Eco81I	CCTNAGG	1 cut(s)	1349
EcoICRI	GAGCTC	1 cut(s)	640
EcoNI	CCTNNNNNAGG	1 cut(s)	759
EcoO109I	RGGNCCY	1 cut(s)	697
EcoRI	GAATTC	2 cut(s)	813, 924
EcoRII	CCWGG	1 cut(s)	754
EcoT14I	CCWWGG	5 cut(s)	52, 319, 450, 700, 771
EcoT38I	GRGCYC	1 cut(s)	642
ErhI	CCWWGG	5 cut(s)	52, 319, 450, 700, 771
FalI	AAGNNNNNCTT	4 cut(s)	660, 692, 1404, 1436
FaqI	GGGAC	1 cut(s)	897
FauI	CCCGC	1 cut(s)	507
FauNDI	CATATG	1 cut(s)	735
Fnu4HI	GCNGC	3 cut(s)	95, 276, 300
FokI	GGATG	6 cut(s)	35, 300, 608, 685, 695, 923
FriOI	GRGCYC	1 cut(s)	642
Fsp4HI	GCNGC	3 cut(s)	95, 276, 300
FspBI	CTAG	3 cut(s)	894, 1154, 1332
GluI	GCNGC	3 cut(s)	95, 276, 300
GsaI	CCCAGC	2 cut(s)	84, 113
HaeIII	GGCC	5 cut(s)	217, 495, 698, 740, 1419
HapII	CCGG	3 cut(s)	69, 100, 218
HindIII	AAGCTT	1 cut(s)	942
HinfI	GANTC	3 cut(s)	469, 1162, 1258
HpaII	CCGG	3 cut(s)	69, 100, 218
HphI	GGTGA	3 cut(s)	266, 473, 1387
Hpy166II	GTNNAC	1 cut(s)	1064
Hpy188I	TCNGA	2 cut(s)	184, 1425
Hpy188III	TCNNGA	4 cut(s)	27, 203, 1145, 1174
Hpy8I	GTNNAC	1 cut(s)	1064
HpyAV	CCTTC	3 cut(s)	961, 1088, 1430
HpyCH4III	ACNGT	4 cut(s)	24, 412, 528, 1028
HpyCH4IV	ACGT	2 cut(s)	1075, 1108
HpyF10VI	GCNNNNNNNGC	2 cut(s)	94, 566
HpyF3I	CTNAG	4 cut(s)	588, 1349, 1385, 1399
HpySE526I	ACGT	2 cut(s)	1075, 1108
Kzo9I	GATC	4 cut(s)	16, 29, 1035, 1150
LguI	GCTCTTC	1 cut(s)	534
LmnI	GCTCC	2 cut(s)	102, 1268
Lsp1109I	GCAGC	3 cut(s)	81, 286, 287
LweI	GCATC	4 cut(s)	278, 286, 663, 901
MaeI	CTAG	3 cut(s)	894, 1154, 1332
MaeII	ACGT	2 cut(s)	1075, 1108
MaeIII	GTNAC	5 cut(s)	24, 832, 1111, 1133, 1431
MalI	GATC	4 cut(s)	18, 31, 1037, 1152
MboI	GATC	4 cut(s)	16, 29, 1035, 1150
MboII	GAAGA	9 cut(s)	191, 410, 551, 804, 913, 1016, 1157, 1160, 1391
MflI	RGATCY	1 cut(s)	1150
MhlI	GDGCHC	1 cut(s)	642
MlyI	GAGTC	1 cut(s)	463
MmeI	TCCRAC	2 cut(s)	213, 972
MroXI	GAANNNNTTC	1 cut(s)	1257
MseI	TTAA	6 cut(s)	192, 414, 476, 906, 1215, 1326
MspA1I	CMGCKG	1 cut(s)	847
MspI	CCGG	3 cut(s)	69, 100, 218
MspR9I	CCNGG	2 cut(s)	101, 756
Mva1269I	GAATGC	1 cut(s)	382
MvaI	CCWGG	1 cut(s)	756
MwoI	GCNNNNNNNGC	2 cut(s)	94, 566
NciI	CCSGG	1 cut(s)	101
NcoI	CCATGG	3 cut(s)	52, 319, 771
NdeI	CATATG	1 cut(s)	735
NdeII	GATC	4 cut(s)	16, 29, 1035, 1150
NlaIV	GGNNCC	3 cut(s)	11, 533, 885
NmuCI	GTSAC	4 cut(s)	24, 1111, 1133, 1431
NspI	RCATGY	3 cut(s)	250, 573, 1204
NspV	TTCGAA	1 cut(s)	1088
PaeI	GCATGC	1 cut(s)	573
PceI	AGGCCT	1 cut(s)	1419
PciI	ACATGT	1 cut(s)	246
PciSI	GCTCTTC	1 cut(s)	534
PctI	GAATGC	1 cut(s)	382
PdmI	GAANNNNTTC	1 cut(s)	1257
PfeI	GAWTC	2 cut(s)	1162, 1258
PfoI	TCCNGGA	2 cut(s)	99, 754
PkrI	GCNGC	3 cut(s)	96, 277, 301
PleI	GAGTC	1 cut(s)	463
PpsI	GAGTC	1 cut(s)	463
PscI	ACATGT	1 cut(s)	246
PshAI	GACNNNNGTC	1 cut(s)	1140
Psp124BI	GAGCTC	1 cut(s)	642
Psp6I	CCWGG	1 cut(s)	754
PspFI	CCCAGC	2 cut(s)	80, 109
PspGI	CCWGG	1 cut(s)	754
PspN4I	GGNNCC	3 cut(s)	11, 533, 885
PspPI	GGNCC	4 cut(s)	215, 697, 884, 1345
PstI	CTGCAG	1 cut(s)	1106
PstNI	CAGNNNCTG	1 cut(s)	94
PsuI	RGATCY	1 cut(s)	1150
RsaI	GTAC	2 cut(s)	144, 843
RsaNI	GTAC	2 cut(s)	143, 842
SacI	GAGCTC	1 cut(s)	642
SapI	GCTCTTC	1 cut(s)	534
SaqAI	TTAA	6 cut(s)	192, 414, 476, 906, 1215, 1326
SatI	GCNGC	3 cut(s)	95, 276, 300
Sau3AI	GATC	4 cut(s)	16, 29, 1035, 1150
Sau96I	GGNCC	4 cut(s)	215, 697, 884, 1345
SchI	GAGTC	1 cut(s)	463
ScrFI	CCNGG	2 cut(s)	101, 756
SduI	GDGCHC	1 cut(s)	642
SfaNI	GCATC	4 cut(s)	278, 286, 663, 901
SfcI	CTRYAG	1 cut(s)	1102
SfuI	TTCGAA	1 cut(s)	1088
SinI	GGWCC	2 cut(s)	884, 1345
SmlI	CTYRAG	2 cut(s)	425, 1172
SmoI	CTYRAG	2 cut(s)	425, 1172
SphI	GCATGC	1 cut(s)	573
SseBI	AGGCCT	1 cut(s)	1419
SsiI	CCGC	3 cut(s)	33, 514, 847
SspMI	CTAG	3 cut(s)	894, 1154, 1332
SstI	GAGCTC	1 cut(s)	642
StuI	AGGCCT	1 cut(s)	1419
StyD4I	CCNGG	2 cut(s)	99, 754
StyI	CCWWGG	5 cut(s)	52, 319, 450, 700, 771
TaaI	ACNGT	4 cut(s)	24, 412, 528, 1028
TaiI	ACGT	2 cut(s)	1078, 1111
TaqI	TCGA	4 cut(s)	204, 391, 949, 1088
TatI	WGTACW	1 cut(s)	841
TfiI	GAWTC	2 cut(s)	1162, 1258
Tru1I	TTAA	6 cut(s)	192, 414, 476, 906, 1215, 1326
Tru9I	TTAA	6 cut(s)	192, 414, 476, 906, 1215, 1326
TscAI	CASTG	5 cut(s)	451, 533, 580, 1033, 1289
TseFI	GTSAC	4 cut(s)	24, 1111, 1133, 1431
TseI	GCWGC	3 cut(s)	94, 275, 299
Tsp45I	GTSAC	4 cut(s)	24, 1111, 1133, 1431
TspDTI	ATGAA	9 cut(s)	146, 612, 624, 954, 1085, 1107, 1157, 1193, 1310
TspRI	CASTG	5 cut(s)	451, 533, 580, 1033, 1289
VpaK11BI	GGWCC	2 cut(s)	884, 1345
XagI	CCTNNNNNAGG	1 cut(s)	759
XapI	RAATTY	5 cut(s)	194, 813, 866, 924, 1339
XceI	RCATGY	3 cut(s)	250, 573, 1204
XmnI	GAANNNNTTC	1 cut(s)	1257
XspI	CTAG	3 cut(s)	894, 1154, 1332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.