Rh2AG275600

Seed biotin-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0001392
Physical Location & Seq
Reverse (-)
32983624 .. 32983994
371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG275600.1

Sequence Viewer

Length: 300 bp
ATGAATTGGTTTCAATTGTTTCTTTTCTTTCAGGTTTGTCAACGTCTTCACTCATTTTTTATGTACTATGCAGCAAAAGATATTCTATCAAGTGTAGGGAAGAAAACGGTGGAGTACACGGTGCCATTAGCAGAGAAAACTAAAGACATGGCAGTATTTGCAGGTTGGACTGCAGCACACGACGGAACTGAGGCACCAGTGGAGGGAACCAAAGCAGCTGCAAGATTAGTTGACGGAGCAGCAGGGTATGCTGGTCATGAGGCTGTGGATATTGTGTCCAAGCCTTTTGAGTGCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

99

Amino Acids

10.9

Weight (kDa)

5.84

Isoelectric Point (pI)

23.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 152
AccB1I GGYRCC 2 cut(s) 121, 193
AfaI GTAC 2 cut(s) 65, 116
AfiI CCNNNNNNNGG 1 cut(s) 203
AgsI TTSAA 1 cut(s) 14
AluBI AGCT 1 cut(s) 218
AluI AGCT 1 cut(s) 218
ApeKI GCWGC 6 cut(s) 71, 173, 215, 218, 239, 294
BanI GGYRCC 2 cut(s) 121, 193
BbsI GAAGAC 1 cut(s) 38
BbvI GCAGC 6 cut(s) 83, 185, 205, 227, 251, 281
BfmI CTRYAG 1 cut(s) 171
BfuAI ACCTGC 1 cut(s) 152
BisI GCNGC 6 cut(s) 72, 174, 216, 219, 240, 295
BlsI GCNGC 6 cut(s) 73, 175, 217, 220, 241, 296
BmiI GGNNCC 3 cut(s) 123, 195, 208
BpiI GAAGAC 1 cut(s) 38
Bsc4I CCNNNNNNNGG 1 cut(s) 203
Bse1I ACTGG 1 cut(s) 197
BseLI CCNNNNNNNGG 1 cut(s) 203
BseMII CTCAG 1 cut(s) 180
BseNI ACTGG 1 cut(s) 197
BseXI GCAGC 6 cut(s) 83, 185, 205, 227, 251, 281
BshNI GGYRCC 2 cut(s) 121, 193
BslI CCNNNNNNNGG 1 cut(s) 203
BspCNI CTCAG 1 cut(s) 181
BspHI TCATGA 1 cut(s) 256
BspLI GGNNCC 3 cut(s) 123, 195, 208
BspMAI CTGCAG 1 cut(s) 175
BspMI ACCTGC 1 cut(s) 152
BspT107I GGYRCC 2 cut(s) 121, 193
BsrI ACTGG 1 cut(s) 197
Bst4CI ACNGT 2 cut(s) 109, 121
BstAPI GCANNNNNTGC 2 cut(s) 158, 248
BstDEI CTNAG 1 cut(s) 189
BstMWI GCNNNNNNNGC 2 cut(s) 158, 248
BstSFI CTRYAG 1 cut(s) 171
BstV1I GCAGC 6 cut(s) 83, 185, 205, 227, 251, 281
BstV2I GAAGAC 1 cut(s) 38
BtsIMutI CAGTG 1 cut(s) 204
BveI ACCTGC 1 cut(s) 152
CciI TCATGA 1 cut(s) 256
Csp6I GTAC 2 cut(s) 64, 115
CviAII CATG 2 cut(s) 148, 257
CviJI RGCY 3 cut(s) 218, 263, 283
CviKI_1 RGCY 3 cut(s) 218, 263, 283
CviQI GTAC 2 cut(s) 64, 115
DdeI CTNAG 1 cut(s) 189
FaeI CATG 2 cut(s) 151, 260
FaiI YATR 5 cut(s) 62, 69, 149, 249, 258
FatI CATG 2 cut(s) 147, 256
Fnu4HI GCNGC 6 cut(s) 72, 174, 216, 219, 240, 295
Fsp4HI GCNGC 6 cut(s) 72, 174, 216, 219, 240, 295
GluI GCNGC 6 cut(s) 72, 174, 216, 219, 240, 295
Hin1II CATG 2 cut(s) 151, 260
HincII GTYRAC 2 cut(s) 41, 232
HindII GTYRAC 2 cut(s) 41, 232
Hpy166II GTNNAC 3 cut(s) 41, 117, 232
Hpy188III TCNNGA 1 cut(s) 257
Hpy8I GTNNAC 3 cut(s) 41, 117, 232
Hpy99I CGWCG 1 cut(s) 185
HpyCH4III ACNGT 2 cut(s) 109, 121
HpyCH4IV ACGT 1 cut(s) 43
HpyCH4V TGCA 4 cut(s) 71, 161, 173, 221
HpyF10VI GCNNNNNNNGC 2 cut(s) 158, 248
HpyF3I CTNAG 1 cut(s) 189
HpySE526I ACGT 1 cut(s) 43
Hsp92II CATG 2 cut(s) 151, 260
LmnI GCTCC 1 cut(s) 236
LpnPI CCDG 5 cut(s) 17, 147, 210, 228, 237
Lsp1109I GCAGC 6 cut(s) 83, 185, 205, 227, 251, 281
MaeII ACGT 1 cut(s) 43
MboII GAAGA 2 cut(s) 38, 112
MfeI CAATTG 1 cut(s) 14
MluCI AATT 2 cut(s) 4, 14
MmeI TCCRAC 1 cut(s) 146
MnlI CCTC 3 cut(s) 184, 196, 253
MspA1I CMGCKG 1 cut(s) 218
MunI CAATTG 1 cut(s) 14
MwoI GCNNNNNNNGC 2 cut(s) 158, 248
NlaIII CATG 2 cut(s) 151, 260
NlaIV GGNNCC 3 cut(s) 123, 195, 208
PagI TCATGA 1 cut(s) 256
PkrI GCNGC 6 cut(s) 73, 175, 217, 220, 241, 296
PspN4I GGNNCC 3 cut(s) 123, 195, 208
PstI CTGCAG 1 cut(s) 175
PvuII CAGCTG 1 cut(s) 218
RsaI GTAC 2 cut(s) 65, 116
RsaNI GTAC 2 cut(s) 64, 115
SatI GCNGC 6 cut(s) 72, 174, 216, 219, 240, 295
SetI ASST 4 cut(s) 36, 46, 166, 220
SfcI CTRYAG 1 cut(s) 171
Sse9I AATT 2 cut(s) 4, 14
TaaI ACNGT 2 cut(s) 109, 121
TaiI ACGT 1 cut(s) 46
TasI AATT 2 cut(s) 4, 14
TatI WGTACW 2 cut(s) 63, 114
TscAI CASTG 1 cut(s) 204
TseI GCWGC 6 cut(s) 71, 173, 215, 218, 239, 294
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 198, 249
TspRI CASTG 1 cut(s) 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.