Rorug04G0408600

Rhomboid family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0001329
Physical Location & Seq
Reverse (-)
57132707 .. 57138093
5387 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0408600.1

Sequence Viewer

Length: 2196 bp
ATGGCTCAATTTGGCGGGAAAAAAGTGGGCCAGATGGTTTTGGGCTTTGGAGGCAGCCCCTTGGGCCAGGCTCTGGCCGCCGTCGCCGCCGCTCTCCTGCTCCGCCTCTTCTCCGGTCCTGGCCCAGCCCTCTTGCCGGACTCAGAATTCGCCGAGGAAGACGACGACGTGATCAACGAAAAAGGCGAAACTCCGGTCGCCGGAAAAGTCGTTCCGGTTACAATCCGGTGGCGCAACATCACCTGCTCTCTCTCCGACAAGTCTTCCAAATCAGTCAGGTTTCTGCTGAATGACGTCAGCGGAGAAGCGAAACCGGGGAGGCTATTGGCGATAATGGGGCCGTCCGGGTCGGGAAAGACGACGCTGCTAAATGTACTCGCCGGTCAGCTAAGTGCTTCTCAAAAGTTGAGCTTATCGGGACTATTAGAGTTCAATGGAAATCCTGGCCCAAACAAAGCCTATAAGATTGCTTATGTGAGACAGGAGGATCTGTTTTTCTCGCAGCTGACGGTGCGAGAGACGTTGTCTCTTGCCGCCGAGCTGCAACTTCCGGAGTTATCTTCCCCGGAAGTGAGATTGGAGTATGTGAACAGTCTGTTGTTCAAAATGGGATTGGTCAGCTGTGCTGATACCAATGTTGGGGATGCGAAAGTCCGAGGAATTAGTGGGGGTGAAAAGAAACGTTTGTCTGTGGCTTGTGAGCTGATTGCAAGCCCCTCTGTTATATTTGCTGATGAACCGACTACTGGACTTGATGCCTTTCAGGCAGAGAAAGTTATGGAAACCCTTCGACAGCTTGCACAAGATGGACATACCGTTATTTGCTCCATACATCAACCTAGGGGTTCTGTTTATGCTAAATTTGATGACATCGTGTTGCTAACCGAAGGTGCACTTGTGTATGCTGGTCCTGCACATGATGAACCACTGACATACTTTTCTAAATTCGGGTACCATTGCCCAGATCATGAGAACCCCGCTGAGTTTCTAGCTGATCTTATATCTGTTGACTACAGCTCTGCTGAAAGTGTCTACTCTTCTCAGAAAAGAATAGATGCTCTTGTTGAATCATTTTCACAACAATCATCACCAGTTCTGTATGCAACTCCGATTACATTAAGGGAAATCTCCAAGAACAGCACCAGGTTGAGCAGGAAGAGTAGAGTTCAGAAGAAGGGAGGTTGGTGGAGCCAATTCTGGTTGCTCCTAAGGCGTGCGTGGATGCAGGCTTCTCGTGATGGACCCACAAATAAAGTTCGGGCAAGAATGTCAGTTGCATCAGCTCTTATATTTGGGTCAGTTTTTTGGAGAATGGGTAGGTCGCAGACATCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCAATGGCGGCTCTGACAAAGACTGTCGGTGTGTTTCCAAAGGAGCGTGCAATAGTAAATAGAGAGCATGCAAAAGGGTCTTATACATTAGGACCTTATCTCCTTTCTAAGTTGTTGGCTGAAATTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTTCTGTTTTGTACCCCATGGCTCGTCTTCATCCTACTTTATCCAGATTTGGGAAGTTTTGTGGTATTGTGACCCTAGAATCTTTTGCGGCATCTGCTATGGGTCTCACAGTTGGTGCTATGGTTCCAACCACTGAAGCAGCTATGGCAGTGGGACCATCACTTATGACAGTTTTTCTTGTATTTGGAGGTTATTATGTGAATGCAAAGAATACACCAATTATCTTTCGTTGGATTCCTCATGCATCTCTAATCAGATGGGCTTTTCAAGGGCTCTGCATCAACGAGTTTCGCGGTCTTCAGTTTGAGCATCAACATTCTTTTGATATTCAAGATGGAGAACAGGCACTTGAACGCATCTCCTTTGGAGCAAGTCATATTAGGGAAACCGTGGTAGCTCAAAGTAGAATACTGTTGTTTTGGTATTGCACCACTTACCTACTGATGGAGAAAAACAAACCGAAATACCAGCAGCTGGAGGCCGCACCTCTTGAACAGACCCAACCAGCAGCACTGCAGCTTGGGCCAATAAATACCGAACAAGTTGAAGAACAAGACCAGTCAGATGAACCTGTAACACCCAAACAAGTTGAACTAGACCAGCCACTTGAATCACCTCCGATTGACCAAGACCCACCATTTATCCTAGAAGGTGCTAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rhomboid

Protein Analysis

731

Amino Acids

79.91

Weight (kDa)

6.46

Isoelectric Point (pI)

42.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 96 - 249 4e-24 ABC transporter
ABC2_membrane_7 PF19055 278 - 335 2.9e-06 ABC-2 type transporter
ABC2_membrane PF01061 398 - 608 1.2e-48 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 251
AatII GACGTC 1 cut(s) 297
Acc36I ACCTGC 1 cut(s) 251
Acc65I GGTACC 1 cut(s) 951
AccB1I GGYRCC 1 cut(s) 951
AccB7I CCANNNNNTGG 2 cut(s) 73, 2008
AccBSI CCGCTC 1 cut(s) 92
AccI GTMKAC 1 cut(s) 1032
AccII CGCG 1 cut(s) 1827
AccIII TCCGGA 1 cut(s) 550
AclI AACGTT 1 cut(s) 682
AclWI GGATC 1 cut(s) 495
AcoI YGGCCR 1 cut(s) 75
AcsI RAATTY 4 cut(s) 146, 860, 944, 1500
AcuI CTGAAG 3 cut(s) 1340, 1689, 1817
AcyI GRCGYC 1 cut(s) 294
AfaI GTAC 3 cut(s) 375, 953, 1547
AfiI CCNNNNNNNGG 8 cut(s) 73, 136, 200, 639, 746, 1584, 1978, 2008
AjiI CACGTC 1 cut(s) 169
AjnI CCWGG 4 cut(s) 66, 118, 442, 1142
AjuI GAANNNNNNNTTGG 2 cut(s) 1491, 1523
AloI GAACNNNNNNTCC 2 cut(s) 195, 227
Alw21I GWGCWC 1 cut(s) 895
Alw26I GTCTC 4 cut(s) 472, 512, 531, 1643
Alw44I GTGCAC 1 cut(s) 891
AlwI GGATC 1 cut(s) 495
AlwNI CAGNNNCTG 2 cut(s) 73, 2008
Aor13HI TCCGGA 1 cut(s) 550
AoxI GGCC 8 cut(s) 28, 64, 75, 121, 338, 445, 2013, 2057
ApaLI GTGCAC 1 cut(s) 891
ApoI RAATTY 4 cut(s) 146, 860, 944, 1500
ArsI GACNNNNNNTTYG 4 cut(s) 131, 163, 180, 212
AseI ATTAAT 1 cut(s) 1526
Asp700I GAANNNNTTC 1 cut(s) 786
Asp718I GGTACC 1 cut(s) 951
AspA2I CCTAGG 1 cut(s) 839
AspLEI GCGC 1 cut(s) 234
AsuC2I CCSGG 3 cut(s) 315, 346, 566
AsuHPI GGTGA 4 cut(s) 232, 683, 1080, 2139
AvaII GGWCC 5 cut(s) 116, 908, 1241, 1469, 1688
AvrII CCTAGG 1 cut(s) 839
AxyI CCTNAGG 1 cut(s) 1208
BaeGI GKGCMC 1 cut(s) 895
BaeI ACNNNNGTAYC 2 cut(s) 621, 654
BanI GGYRCC 1 cut(s) 951
BanII GRGCYC 1 cut(s) 1809
BauI CACGAG 1 cut(s) 1233
BbsI GAAGAC 4 cut(s) 165, 255, 1553, 1823
Bbv12I GWGCWC 1 cut(s) 895
BccI CCATC 7 cut(s) 28, 800, 1232, 1699, 1785, 1862, 1972
BceAI ACGGC 2 cut(s) 65, 325
BcgI CGANNNNNNTGC 2 cut(s) 1214, 1248
BciT130I CCWGG 4 cut(s) 68, 120, 444, 1144
BclI TGATCA 1 cut(s) 171
BcnI CCSGG 3 cut(s) 315, 346, 566
BcoDI GTCTC 4 cut(s) 472, 512, 531, 1643
BfaI CTAG 5 cut(s) 840, 989, 1610, 2129, 2180
BfmI CTRYAG 2 cut(s) 1012, 2048
BfuAI ACCTGC 1 cut(s) 251
BglI GCCNNNNNGGC 2 cut(s) 63, 764
BlnI CCTAGG 1 cut(s) 839
Bme1390I CCNGG 7 cut(s) 68, 120, 315, 346, 444, 566, 1144
Bme18I GGWCC 5 cut(s) 116, 908, 1241, 1469, 1688
BmgBI CACGTC 1 cut(s) 169
BmiI GGNNCC 6 cut(s) 339, 953, 1190, 1243, 1659, 1689
BmrFI CCNGG 7 cut(s) 68, 120, 315, 346, 444, 566, 1144
BpiI GAAGAC 4 cut(s) 165, 255, 1553, 1823
BpmI CTGGAG 1 cut(s) 2030
BpuMI CCSGG 3 cut(s) 315, 346, 566
BsaHI GRCGYC 1 cut(s) 294
BsaI GGTCTC 1 cut(s) 1643
BsaJI CCNNGG 8 cut(s) 60, 153, 314, 564, 655, 839, 1551, 1923
BsaWI WCCGGW 5 cut(s) 113, 193, 214, 225, 550
BsaXI ACNNNNNCTCC 6 cut(s) 476, 506, 1300, 1330, 1461, 1491
Bsc4I CCNNNNNNNGG 8 cut(s) 73, 136, 200, 639, 746, 1584, 1978, 2008
Bse118I RCCGGY 1 cut(s) 380
Bse1I ACTGG 3 cut(s) 751, 1091, 2092
Bse21I CCTNAGG 1 cut(s) 1208
Bse3DI GCAATG 2 cut(s) 955, 1386
BseAI TCCGGA 1 cut(s) 550
BseBI CCWGG 4 cut(s) 68, 120, 444, 1144
BseDI CCNNGG 8 cut(s) 60, 153, 314, 564, 655, 839, 1551, 1923
BseGI GGATG 3 cut(s) 649, 1227, 1564
BseLI CCNNNNNNNGG 8 cut(s) 73, 136, 200, 639, 746, 1584, 1978, 2008
BseMI GCAATG 2 cut(s) 955, 1386
BseMII CTCAG 3 cut(s) 156, 972, 1055
BseNI ACTGG 3 cut(s) 751, 1091, 2092
BseSI GKGCMC 1 cut(s) 895
BseYI CCCAGC 1 cut(s) 124
BsgI GTGCAG 1 cut(s) 897
Bsh1236I CGCG 1 cut(s) 1827
Bsh1285I CGRYCG 1 cut(s) 198
BshFI GGCC 8 cut(s) 30, 66, 77, 123, 340, 447, 2015, 2059
BshNI GGYRCC 1 cut(s) 951
BsiEI CGRYCG 1 cut(s) 198
BsiHKAI GWGCWC 1 cut(s) 895
BslFI GGGAC 2 cut(s) 432, 1701
BslI CCNNNNNNNGG 8 cut(s) 73, 136, 200, 639, 746, 1584, 1978, 2008
BsmAI GTCTC 4 cut(s) 472, 512, 531, 1643
BsmBI CGTCTC 1 cut(s) 512
BsmFI GGGAC 2 cut(s) 432, 1701
BsmI GAATGC 1 cut(s) 1741
BsnI GGCC 8 cut(s) 30, 66, 77, 123, 340, 447, 2015, 2059
Bso31I GGTCTC 1 cut(s) 1643
Bsp1286I GDGCHC 2 cut(s) 895, 1809
Bsp13I TCCGGA 1 cut(s) 550
Bsp143I GATC 4 cut(s) 171, 487, 964, 994
Bsp19I CCATGG 1 cut(s) 1551
BspANI GGCC 8 cut(s) 30, 66, 77, 123, 340, 447, 2015, 2059
BspCNI CTCAG 3 cut(s) 155, 973, 1054
BspEI TCCGGA 1 cut(s) 550
BspFNI CGCG 1 cut(s) 1827
BspHI TCATGA 1 cut(s) 967
BspLI GGNNCC 6 cut(s) 339, 953, 1190, 1243, 1659, 1689
BspMAI CTGCAG 1 cut(s) 2052
BspMI ACCTGC 1 cut(s) 251
BspPI GGATC 1 cut(s) 495
BspT107I GGYRCC 1 cut(s) 951
BspTNI GGTCTC 1 cut(s) 1643
BsrBI CCGCTC 1 cut(s) 92
BsrDI GCAATG 2 cut(s) 955, 1386
BsrFI RCCGGY 1 cut(s) 380
BsrI ACTGG 3 cut(s) 751, 1091, 2092
BssAI RCCGGY 1 cut(s) 380
BssECI CCNNGG 8 cut(s) 60, 153, 314, 564, 655, 839, 1551, 1923
BssMI GATC 4 cut(s) 171, 487, 964, 994
BssNI GRCGYC 1 cut(s) 294
BssSI CACGAG 1 cut(s) 1233
BssT1I CCWWGG 3 cut(s) 60, 839, 1551
Bst2BI CACGAG 1 cut(s) 1233
Bst2UI CCWGG 4 cut(s) 68, 120, 444, 1144
Bst4CI ACNGT 8 cut(s) 511, 593, 817, 1402, 1645, 1705, 1924, 1947
Bst6I CTCTTC 3 cut(s) 113, 1042, 1151
BstACI GRCGYC 1 cut(s) 294
BstC8I GCNNGC 6 cut(s) 712, 798, 1215, 1227, 1425, 1446
BstDEI CTNAG 7 cut(s) 142, 389, 981, 1041, 1208, 1485, 2190
BstDSI CCRYGG 2 cut(s) 1551, 1923
BstF5I GGATG 3 cut(s) 649, 1227, 1564
BstFNI CGCG 1 cut(s) 1827
BstHHI GCGC 1 cut(s) 234
BstKTI GATC 4 cut(s) 174, 490, 967, 997
BstMAI GTCTC 4 cut(s) 472, 512, 531, 1643
BstMBI GATC 4 cut(s) 171, 487, 964, 994
BstMCI CGRYCG 1 cut(s) 198
BstNI CCWGG 4 cut(s) 68, 120, 444, 1144
BstNSI RCATGY 1 cut(s) 1448
BstSCI CCNGG 7 cut(s) 66, 118, 313, 344, 442, 564, 1142
BstSFI CTRYAG 2 cut(s) 1012, 2048
BstSLI GKGCMC 1 cut(s) 895
BstUI CGCG 1 cut(s) 1827
BstV2I GAAGAC 4 cut(s) 165, 255, 1553, 1823
BstX2I RGATCY 1 cut(s) 487
BstYI RGATCY 1 cut(s) 487
Bsu36I CCTNAGG 1 cut(s) 1208
BsuRI GGCC 8 cut(s) 30, 66, 77, 123, 340, 447, 2015, 2059
BtgI CCRYGG 2 cut(s) 1551, 1923
BtrI CACGTC 1 cut(s) 169
BtsCI GGATG 3 cut(s) 649, 1227, 1564
BtsI GCAGTG 2 cut(s) 1689, 2045
BtsIMutI CAGTG 4 cut(s) 926, 1665, 1689, 2045
BveI ACCTGC 1 cut(s) 251
Cac8I GCNNGC 6 cut(s) 712, 798, 1215, 1227, 1425, 1446
CaiI CAGNNNCTG 2 cut(s) 73, 2008
CciI TCATGA 1 cut(s) 967
CfoI GCGC 1 cut(s) 234
Cfr10I RCCGGY 1 cut(s) 380
CseI GACGC 1 cut(s) 370
CsiI ACCWGGT 1 cut(s) 1142
Csp6I GTAC 3 cut(s) 374, 952, 1546
CviAII CATG 5 cut(s) 917, 968, 1445, 1552, 1775
CviQI GTAC 3 cut(s) 374, 952, 1546
DdeI CTNAG 7 cut(s) 142, 389, 981, 1041, 1208, 1485, 2190
DpnI GATC 4 cut(s) 173, 489, 966, 996
DpnII GATC 4 cut(s) 171, 487, 964, 994
EaeI YGGCCR 1 cut(s) 75
Eam1104I CTCTTC 3 cut(s) 113, 1042, 1151
EarI CTCTTC 3 cut(s) 113, 1042, 1151
EciI GGCGGA 1 cut(s) 92
Eco130I CCWWGG 3 cut(s) 60, 839, 1551
Eco24I GRGCYC 1 cut(s) 1809
Eco31I GGTCTC 1 cut(s) 1643
Eco47I GGWCC 5 cut(s) 116, 908, 1241, 1469, 1688
Eco57I CTGAAG 3 cut(s) 1340, 1689, 1817
Eco81I CCTNAGG 1 cut(s) 1208
EcoO109I RGGNCCY 1 cut(s) 1469
EcoRI GAATTC 1 cut(s) 146
EcoRII CCWGG 4 cut(s) 66, 118, 442, 1142
EcoT14I CCWWGG 3 cut(s) 60, 839, 1551
EcoT22I ATGCAT 1 cut(s) 1780
EcoT38I GRGCYC 1 cut(s) 1809
ErhI CCWWGG 3 cut(s) 60, 839, 1551
Esp3I CGTCTC 1 cut(s) 512
FaeI CATG 5 cut(s) 920, 971, 1448, 1555, 1778
FalI AAGNNNNNCTT 4 cut(s) 395, 427, 879, 911
FaqI GGGAC 2 cut(s) 432, 1701
FatI CATG 5 cut(s) 916, 967, 1444, 1551, 1774
FauI CCCGC 2 cut(s) 8, 985
FbaI TGATCA 1 cut(s) 171
FblI GTMKAC 1 cut(s) 1032
FokI GGATG 3 cut(s) 656, 1234, 1551
FriOI GRGCYC 1 cut(s) 1809
FspBI CTAG 5 cut(s) 840, 989, 1610, 2129, 2180
GlaI GCGC 1 cut(s) 233
GsaI CCCAGC 1 cut(s) 128
GsuI CTGGAG 1 cut(s) 2030
HaeIII GGCC 8 cut(s) 30, 66, 77, 123, 340, 447, 2015, 2059
HgaI GACGC 1 cut(s) 370
HhaI GCGC 1 cut(s) 234
Hin1I GRCGYC 1 cut(s) 294
Hin1II CATG 5 cut(s) 920, 971, 1448, 1555, 1778
Hin6I GCGC 1 cut(s) 232
HinP1I GCGC 1 cut(s) 232
HincII GTYRAC 1 cut(s) 1009
HindII GTYRAC 1 cut(s) 1009
HinfI GANTC 5 cut(s) 140, 1067, 1613, 1768, 2144
HphI GGTGA 4 cut(s) 232, 683, 1080, 2139
Hpy166II GTNNAC 4 cut(s) 589, 893, 1009, 1033
Hpy188III TCNNGA 8 cut(s) 351, 417, 551, 968, 1235, 1578, 1865, 2024
Hpy8I GTNNAC 4 cut(s) 589, 893, 1009, 1033
Hpy99I CGWCG 4 cut(s) 86, 167, 170, 364
HpyAV CCTTC 4 cut(s) 797, 881, 1168, 2177
HpyCH4III ACNGT 8 cut(s) 511, 593, 817, 1402, 1645, 1705, 1924, 1947
HpyCH4IV ACGT 4 cut(s) 168, 294, 521, 682
HpyF3I CTNAG 7 cut(s) 142, 389, 981, 1041, 1208, 1485, 2190
HpySE526I ACGT 4 cut(s) 168, 294, 521, 682
Hsp92I GRCGYC 1 cut(s) 294
Hsp92II CATG 5 cut(s) 920, 971, 1448, 1555, 1778
HspAI GCGC 1 cut(s) 232
Kpn2I TCCGGA 1 cut(s) 550
KpnI GGTACC 1 cut(s) 955
Ksp22I TGATCA 1 cut(s) 171
Kzo9I GATC 4 cut(s) 171, 487, 964, 994
LmnI GCTCC 7 cut(s) 105, 830, 1188, 1209, 1420, 1511, 1901
MabI ACCWGGT 1 cut(s) 1142
MaeI CTAG 5 cut(s) 840, 989, 1610, 2129, 2180
MaeII ACGT 4 cut(s) 168, 294, 521, 682
MaeIII GTNAC 3 cut(s) 217, 1603, 2107
MalI GATC 4 cut(s) 173, 489, 966, 996
MbiI CCGCTC 1 cut(s) 92
MboI GATC 4 cut(s) 171, 487, 964, 994
MflI RGATCY 1 cut(s) 487
MhlI GDGCHC 2 cut(s) 895, 1809
MluCI AATT 8 cut(s) 8, 146, 660, 860, 944, 1193, 1500, 1752
MlyI GAGTC 1 cut(s) 134
MmeI TCCRAC 3 cut(s) 279, 1685, 1745
Mph1103I ATGCAT 1 cut(s) 1780
MroI TCCGGA 1 cut(s) 550
MroXI GAANNNNTTC 1 cut(s) 786
MseI TTAA 2 cut(s) 1118, 1526
MslI CAYNNNNRTG 1 cut(s) 1379
MspA1I CMGCKG 5 cut(s) 300, 505, 621, 980, 2008
MspR9I CCNGG 7 cut(s) 68, 120, 315, 346, 444, 566, 1144
Mva1269I GAATGC 1 cut(s) 1741
MvaI CCWGG 4 cut(s) 68, 120, 444, 1144
MvnI CGCG 1 cut(s) 1827
NciI CCSGG 3 cut(s) 315, 346, 566
NcoI CCATGG 1 cut(s) 1551
NdeII GATC 4 cut(s) 171, 487, 964, 994
NlaIII CATG 5 cut(s) 920, 971, 1448, 1555, 1778
NlaIV GGNNCC 6 cut(s) 339, 953, 1190, 1243, 1659, 1689
NmeAIII GCCGAG 2 cut(s) 178, 562
NmuCI GTSAC 1 cut(s) 1603
NsiI ATGCAT 1 cut(s) 1780
NspI RCATGY 1 cut(s) 1448
PaeI GCATGC 1 cut(s) 1448
PagI TCATGA 1 cut(s) 967
PaqCI CACCTGC 1 cut(s) 251
PcsI WCGNNNNNNNCGW 3 cut(s) 174, 183, 356
PctI GAATGC 1 cut(s) 1741
PdmI GAANNNNTTC 1 cut(s) 786
PfeI GAWTC 4 cut(s) 1067, 1613, 1768, 2144
PflFI GACNNNGTC 1 cut(s) 523
PflMI CCANNNNNTGG 2 cut(s) 73, 2008
PleI GAGTC 1 cut(s) 134
PpsI GAGTC 1 cut(s) 134
PpuMI RGGWCCY 1 cut(s) 1469
PshBI ATTAAT 1 cut(s) 1526
Psp1406I AACGTT 1 cut(s) 682
Psp5II RGGWCCY 1 cut(s) 1469
Psp6I CCWGG 4 cut(s) 66, 118, 442, 1142
PspFI CCCAGC 1 cut(s) 124
PspGI CCWGG 4 cut(s) 66, 118, 442, 1142
PspN4I GGNNCC 6 cut(s) 339, 953, 1190, 1243, 1659, 1689
PspPPI RGGWCCY 1 cut(s) 1469
PstI CTGCAG 1 cut(s) 2052
PstNI CAGNNNCTG 2 cut(s) 73, 2008
PsuI RGATCY 1 cut(s) 487
PsyI GACNNNGTC 1 cut(s) 523
PvuII CAGCTG 3 cut(s) 505, 621, 2008
RsaI GTAC 3 cut(s) 375, 953, 1547
RsaNI GTAC 3 cut(s) 374, 952, 1546
RseI CAYNNNNRTG 1 cut(s) 1379
SaqAI TTAA 2 cut(s) 1118, 1526
Sau3AI GATC 4 cut(s) 171, 487, 964, 994
SchI GAGTC 1 cut(s) 134
ScrFI CCNGG 7 cut(s) 68, 120, 315, 346, 444, 566, 1144
SduI GDGCHC 2 cut(s) 895, 1809
SexAI ACCWGGT 1 cut(s) 1142
SfcI CTRYAG 2 cut(s) 1012, 2048
SinI GGWCC 5 cut(s) 116, 908, 1241, 1469, 1688
SmiMI CAYNNNNRTG 1 cut(s) 1379
SphI GCATGC 1 cut(s) 1448
Sse9I AATT 8 cut(s) 8, 146, 660, 860, 944, 1193, 1500, 1752
SspMI CTAG 5 cut(s) 840, 989, 1610, 2129, 2180
StyD4I CCNGG 7 cut(s) 66, 118, 313, 344, 442, 564, 1142
StyI CCWWGG 3 cut(s) 60, 839, 1551
TaaI ACNGT 8 cut(s) 511, 593, 817, 1402, 1645, 1705, 1924, 1947
TaiI ACGT 4 cut(s) 171, 297, 524, 685
TaqI TCGA 1 cut(s) 790
TasI AATT 8 cut(s) 8, 146, 660, 860, 944, 1193, 1500, 1752
TatI WGTACW 1 cut(s) 373
TauI GCSGC 7 cut(s) 80, 89, 92, 536, 1388, 1625, 2018
TfiI GAWTC 4 cut(s) 1067, 1613, 1768, 2144
Tru1I TTAA 2 cut(s) 1118, 1526
Tru9I TTAA 2 cut(s) 1118, 1526
TscAI CASTG 4 cut(s) 933, 1672, 1689, 2052
TseFI GTSAC 1 cut(s) 1603
Tsp45I GTSAC 1 cut(s) 1603
TspDTI ATGAA 4 cut(s) 750, 936, 1553, 2115
TspRI CASTG 4 cut(s) 933, 1672, 1689, 2052
Tth111I GACNNNGTC 1 cut(s) 523
Van91I CCANNNNNTGG 2 cut(s) 73, 2008
VneI GTGCAC 1 cut(s) 891
VpaK11BI GGWCC 5 cut(s) 116, 908, 1241, 1469, 1688
VspI ATTAAT 1 cut(s) 1526
XapI RAATTY 4 cut(s) 146, 860, 944, 1500
XceI RCATGY 1 cut(s) 1448
XmaJI CCTAGG 1 cut(s) 839
XmiI GTMKAC 1 cut(s) 1032
XmnI GAANNNNTTC 1 cut(s) 786
XspI CTAG 5 cut(s) 840, 989, 1610, 2129, 2180
ZraI GACGTC 1 cut(s) 295
Zsp2I ATGCAT 1 cut(s) 1780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.