Rhomboid family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rhomboid | PF01694 | 4 - 64 | 3.6e-13 | Rhomboid domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 125 |
| AcuI | CTGAAG | 1 cut(s) | 155 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 218 |
| AflIII | ACRYGT | 1 cut(s) | 10 |
| AjiI | CACGTC | 1 cut(s) | 11 |
| AluBI | AGCT | 3 cut(s) | 149, 155, 261 |
| AluI | AGCT | 3 cut(s) | 149, 155, 261 |
| Alw21I | GWGCWC | 1 cut(s) | 186 |
| Alw44I | GTGCAC | 1 cut(s) | 182 |
| AoxI | GGCC | 2 cut(s) | 119, 287 |
| ApaLI | GTGCAC | 1 cut(s) | 182 |
| ApoI | RAATTY | 1 cut(s) | 125 |
| AspS9I | GGNCC | 2 cut(s) | 119, 287 |
| BaeGI | GKGCMC | 1 cut(s) | 186 |
| Bbv12I | GWGCWC | 1 cut(s) | 186 |
| BmgBI | CACGTC | 1 cut(s) | 11 |
| BmgT120I | GGNCC | 2 cut(s) | 119, 287 |
| BpmI | CTGGAG | 1 cut(s) | 171 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 218 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 218 |
| BseMII | CTCAG | 1 cut(s) | 180 |
| BseSI | GKGCMC | 1 cut(s) | 186 |
| BshFI | GGCC | 2 cut(s) | 121, 289 |
| BsiHKAI | GWGCWC | 1 cut(s) | 186 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 218 |
| BsnI | GGCC | 2 cut(s) | 121, 289 |
| Bsp1286I | GDGCHC | 1 cut(s) | 186 |
| Bsp143I | GATC | 1 cut(s) | 75 |
| BspANI | GGCC | 2 cut(s) | 121, 289 |
| BspCNI | CTCAG | 1 cut(s) | 179 |
| BssMI | GATC | 1 cut(s) | 75 |
| Bst4CI | ACNGT | 1 cut(s) | 84 |
| BstDEI | CTNAG | 1 cut(s) | 166 |
| BstKTI | GATC | 1 cut(s) | 78 |
| BstMBI | GATC | 1 cut(s) | 75 |
| BstSLI | GKGCMC | 1 cut(s) | 186 |
| BsuRI | GGCC | 2 cut(s) | 121, 289 |
| BtrI | CACGTC | 1 cut(s) | 11 |
| Cfr13I | GGNCC | 2 cut(s) | 119, 287 |
| CviAII | CATG | 2 cut(s) | 44, 73 |
| CviJI | RGCY | 6 cut(s) | 121, 149, 155, 165, 261, 289 |
| CviKI_1 | RGCY | 6 cut(s) | 121, 149, 155, 165, 261, 289 |
| DdeI | CTNAG | 1 cut(s) | 166 |
| DpnI | GATC | 1 cut(s) | 77 |
| DpnII | GATC | 1 cut(s) | 75 |
| Eco57I | CTGAAG | 1 cut(s) | 155 |
| FaeI | CATG | 2 cut(s) | 47, 76 |
| FaiI | YATR | 6 cut(s) | 45, 60, 62, 74, 144, 189 |
| FatI | CATG | 2 cut(s) | 43, 72 |
| FauNDI | CATATG | 1 cut(s) | 60 |
| GsuI | CTGGAG | 1 cut(s) | 171 |
| HaeIII | GGCC | 2 cut(s) | 121, 289 |
| Hin1II | CATG | 2 cut(s) | 47, 76 |
| Hpy166II | GTNNAC | 2 cut(s) | 16, 184 |
| Hpy188I | TCNGA | 1 cut(s) | 80 |
| Hpy188III | TCNNGA | 1 cut(s) | 196 |
| Hpy8I | GTNNAC | 2 cut(s) | 16, 184 |
| HpyAV | CCTTC | 1 cut(s) | 202 |
| HpyCH4III | ACNGT | 1 cut(s) | 84 |
| HpyCH4IV | ACGT | 1 cut(s) | 10 |
| HpyCH4V | TGCA | 2 cut(s) | 35, 184 |
| HpyF3I | CTNAG | 1 cut(s) | 166 |
| HpySE526I | ACGT | 1 cut(s) | 10 |
| Hsp92II | CATG | 2 cut(s) | 47, 76 |
| Kzo9I | GATC | 1 cut(s) | 75 |
| LmnI | GCTCC | 1 cut(s) | 152 |
| LpnPI | CCDG | 5 cut(s) | 45, 135, 135, 209, 215 |
| MaeII | ACGT | 1 cut(s) | 10 |
| MalI | GATC | 1 cut(s) | 77 |
| MboI | GATC | 1 cut(s) | 75 |
| MhlI | GDGCHC | 1 cut(s) | 186 |
| MluCI | AATT | 3 cut(s) | 36, 125, 251 |
| MmeI | TCCRAC | 1 cut(s) | 236 |
| MnlI | CCTC | 2 cut(s) | 90, 211 |
| MseI | TTAA | 1 cut(s) | 69 |
| MslI | CAYNNNNRTG | 1 cut(s) | 48 |
| NdeI | CATATG | 1 cut(s) | 60 |
| NdeII | GATC | 1 cut(s) | 75 |
| NlaIII | CATG | 2 cut(s) | 47, 76 |
| PspPI | GGNCC | 2 cut(s) | 119, 287 |
| RseI | CAYNNNNRTG | 1 cut(s) | 48 |
| SaqAI | TTAA | 1 cut(s) | 69 |
| Sau3AI | GATC | 1 cut(s) | 75 |
| Sau96I | GGNCC | 2 cut(s) | 119, 287 |
| SduI | GDGCHC | 1 cut(s) | 186 |
| SetI | ASST | 6 cut(s) | 13, 151, 157, 194, 204, 263 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 48 |
| Sse9I | AATT | 3 cut(s) | 36, 125, 251 |
| SspI | AATATT | 1 cut(s) | 103 |
| TaaI | ACNGT | 1 cut(s) | 84 |
| TaiI | ACGT | 1 cut(s) | 13 |
| TasI | AATT | 3 cut(s) | 36, 125, 251 |
| Tru1I | TTAA | 1 cut(s) | 69 |
| Tru9I | TTAA | 1 cut(s) | 69 |
| VneI | GTGCAC | 1 cut(s) | 182 |
| XapI | RAATTY | 1 cut(s) | 125 |