Rorug06G0456600

Rhomboid family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001329
Physical Location & Seq
Forward (+)
58410176 .. 58416058
5883 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0456600.1

Sequence Viewer

Length: 1473 bp
ATGGAATCGAGTCTGTCTTCACTGCACGAGCCTCACCATTTCTCTCATAACCTAACCTTTCGAACCCTAAACCCCATACTGAATCGCCGGAATCTCAACCTAGGGTTTCGAACCAATTCCACAGTCTCCGTTTCCGTCTCCAGCTCATTCTCCAAAACCGAACCGATCACCTCCTCCACACCCGAACCGGCCGCGAGCCCGGTCTACACTCCCACACCTCCGAACCGGGACCTCCGGACCCCTCACAGCGGGTATCATTTCGATGGAACTGCTCGGAAATTCTTTGAGGGATGGTACTTCAAGGTTTCGATTCCGGAACGGAGGCAGAGCTTTTGCTTTATGTACTCCGTCGAGAATCCGGCGTTCCGTAAGAGACTGACGCCGTTGGAGTTGGCTCAGCACGGACCTAGAACCACCGGAGTCGGAGCTCAGATTCTCGGCGCGGGTGACAAGTACATTTGCCAATACAGTGAAGAATCTAGTAACTTTTGGGGAAGTAGGCATGAGCTTATGTTGGGGAATACTTTTGTCGCAGAAAAACAATCAAAGCCTCCAAACAAGGAGGTTCCTCCTCAGGAATTCAATAAGAGAGTAGTGGAAGGTTTTCAAGTAACTCCACTTTGGCACCAGGGTATTATTCATGATGATGGCAGGACAAATTATGCGGAAACTGTGCCGACCGCACGTTGGGAATACAGTACCCGTCCAATTTTTGGGTGGGGTGATGTTGGCTCCAAGCAGAAGCCTACTGCTGGATGGTTAGCAGCTTTTCCTGTATTTGAACCCCATTGGCAAATATGCATGGCTGGTGGATTGTCAACAGGTTGGATAGAGTGGGATGGTGAAAGATACGAGTTTCAAGATGCCCCTTCTTATTCTGAAAAGAACTGGGGTGGAGCATTCCCAAGAAAATGGTTCTGGGTCCAGTGTAATGTTTTTGAAGGGGCTAGTGGAGAAGTTGCTCTTACTGCAGGTGGTGGGTTGAGGCAAATACCTGGGTTATCAGAGACTTTTGAAAACGCTGCCCTGATTGGAGTTCACTGTGGTGGAAAGTTTTATGAATTTGTACCATGGAATGGTGTTGTTAGTTGGGAAATCGCTACTTGGGGTTATTGGTCCATGGCTGCAGAGAATGAGACGCATATGGTTGAATTAGAGGCAACAACAGAGGATCCTGGTACAACATTGCGTGCTCCAACATCAGAAGCTGGACTTGCCCCAGCTTGTAAAGATACTTGTTTTGGTGTGCTAAAATTACAGATGTGGGAACGTAGATATGATGGCAGCAAGGGAAAGATGATATTAGATGTTAAAAGCAACATGGCCGCAGTAGAAGTTGGAGGGGGTCCATGGTTCAGTGCTTGGAAGGGAAAGACCTCTACTCCGGAGCTTCTTAAGCGGGCTATAGGAGCTCCGGTCGATGTAGAAGGGGCATATAATTTGGTTCCACTATTCAAACCCCCTGGTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rhomboid

Protein Analysis

490

Amino Acids

54.62

Weight (kDa)

6.38

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tocopherol_cycl PF14249 92 - 448 1e-144 Tocopherol cyclase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 962
Acc36I ACCTGC 1 cut(s) 962
AccB1I GGYRCC 1 cut(s) 624
AccB7I CCANNNNNTGG 2 cut(s) 713, 1076
AccI GTMKAC 1 cut(s) 204
AccII CGCG 2 cut(s) 194, 443
AccIII TCCGGA 3 cut(s) 234, 313, 1384
AciI CCGC 7 cut(s) 192, 249, 443, 665, 681, 1326, 1399
AclWI GGATC 2 cut(s) 1166, 1179
AcoI YGGCCR 2 cut(s) 189, 1323
AcsI RAATTY 3 cut(s) 278, 578, 1061
AcyI GRCGYC 1 cut(s) 380
AfaI GTAC 6 cut(s) 296, 344, 455, 700, 1068, 1180
AfiI CCNNNNNNNGG 5 cut(s) 248, 687, 713, 752, 1076
AflII CTTAAG 1 cut(s) 1394
AgsI TTSAA 9 cut(s) 301, 583, 608, 782, 860, 941, 1016, 1151, 1456
AjnI CCWGG 4 cut(s) 627, 994, 1174, 1462
AleI CACNNNNGTG 1 cut(s) 1044
AluBI AGCT 9 cut(s) 144, 330, 428, 508, 767, 1208, 1223, 1390, 1412
AluI AGCT 9 cut(s) 144, 330, 428, 508, 767, 1208, 1223, 1390, 1412
Alw21I GWGCWC 3 cut(s) 430, 1195, 1414
Alw26I GTCTC 5 cut(s) 130, 142, 367, 1001, 1130
AlwI GGATC 2 cut(s) 1166, 1179
AlwNI CAGNNNCTG 1 cut(s) 1208
Aor13HI TCCGGA 3 cut(s) 234, 313, 1384
AoxI GGCC 2 cut(s) 189, 1323
ApeKI GCWGC 4 cut(s) 764, 1022, 1124, 1284
ApoI RAATTY 3 cut(s) 278, 578, 1061
Asp700I GAANNNNTTC 2 cut(s) 115, 603
AspA2I CCTAGG 1 cut(s) 100
AspLEI GCGC 1 cut(s) 443
AspS9I GGNCC 6 cut(s) 229, 237, 404, 922, 1116, 1346
AsuC2I CCSGG 2 cut(s) 200, 227
AsuHPI GGTGA 5 cut(s) 26, 160, 458, 734, 854
AsuII TTCGAA 2 cut(s) 61, 109
AvaII GGWCC 6 cut(s) 229, 237, 404, 922, 1116, 1346
AvrII CCTAGG 1 cut(s) 100
AxyI CCTNAGG 1 cut(s) 573
BamHI GGATCC 1 cut(s) 1171
BanI GGYRCC 1 cut(s) 624
BanII GRGCYC 3 cut(s) 200, 430, 1414
BauI CACGAG 1 cut(s) 26
BbsI GAAGAC 1 cut(s) 9
Bbv12I GWGCWC 3 cut(s) 430, 1195, 1414
BbvI GCAGC 4 cut(s) 776, 1009, 1111, 1296
BccI CCATC 6 cut(s) 257, 285, 641, 750, 833, 1274
BceAI ACGGC 1 cut(s) 367
BcgI CGANNNNNNTGC 2 cut(s) 251, 285
BciT130I CCWGG 4 cut(s) 629, 996, 1176, 1464
BcnI CCSGG 2 cut(s) 200, 227
BcoDI GTCTC 5 cut(s) 130, 142, 367, 1001, 1130
BfaI CTAG 4 cut(s) 101, 408, 480, 948
BfmI CTRYAG 3 cut(s) 969, 1125, 1404
BfrI CTTAAG 1 cut(s) 1394
BfuAI ACCTGC 1 cut(s) 962
BisI GCNGC 6 cut(s) 192, 765, 1023, 1125, 1285, 1326
BlnI CCTAGG 1 cut(s) 100
BlpI GCTNAGC 1 cut(s) 396
BlsI GCNGC 6 cut(s) 193, 766, 1024, 1126, 1286, 1327
Bme1390I CCNGG 6 cut(s) 200, 227, 629, 996, 1176, 1464
Bme18I GGWCC 6 cut(s) 229, 237, 404, 922, 1116, 1346
BmgT120I GGNCC 6 cut(s) 229, 237, 404, 922, 1116, 1346
BmiI GGNNCC 9 cut(s) 230, 239, 567, 626, 733, 923, 1173, 1347, 1446
BmrFI CCNGG 6 cut(s) 200, 227, 629, 996, 1176, 1464
BmrI ACTGGG 1 cut(s) 898
BmsI GCATC 1 cut(s) 853
BmuI ACTGGG 1 cut(s) 898
BpiI GAAGAC 1 cut(s) 9
BpmI CTGGAG 1 cut(s) 124
Bpu1102I GCTNAGC 1 cut(s) 396
Bpu14I TTCGAA 2 cut(s) 61, 109
BpuMI CCSGG 2 cut(s) 200, 227
BsaHI GRCGYC 1 cut(s) 380
BsaJI CCNNGG 7 cut(s) 100, 628, 995, 1070, 1119, 1349, 1462
BsaWI WCCGGW 5 cut(s) 234, 313, 416, 1384, 1414
BsaXI ACNNNNNCTCC 4 cut(s) 1366, 1396, 1401, 1431
Bsc4I CCNNNNNNNGG 5 cut(s) 248, 687, 713, 752, 1076
Bse118I RCCGGY 1 cut(s) 187
Bse1I ACTGG 2 cut(s) 893, 925
Bse21I CCTNAGG 1 cut(s) 573
Bse3DI GCAATG 1 cut(s) 1184
BseAI TCCGGA 3 cut(s) 234, 313, 1384
BseBI CCWGG 4 cut(s) 629, 996, 1176, 1464
BseDI CCNNGG 7 cut(s) 100, 628, 995, 1070, 1119, 1349, 1462
BseGI GGATG 3 cut(s) 296, 761, 844
BseLI CCNNNNNNNGG 5 cut(s) 248, 687, 713, 752, 1076
BseMI GCAATG 1 cut(s) 1184
BseMII CTCAG 3 cut(s) 410, 443, 587
BseNI ACTGG 2 cut(s) 893, 925
BseRI GAGGAG 2 cut(s) 163, 561
BseX3I CGGCCG 1 cut(s) 189
BseXI GCAGC 4 cut(s) 776, 1009, 1111, 1296
BseYI CCCAGC 1 cut(s) 1219
BsgI GTGCAG 1 cut(s) 8
Bsh1236I CGCG 2 cut(s) 194, 443
Bsh1285I CGRYCG 3 cut(s) 192, 681, 1419
BshFI GGCC 2 cut(s) 191, 1325
BshNI GGYRCC 1 cut(s) 624
BsiEI CGRYCG 3 cut(s) 192, 681, 1419
BsiHKAI GWGCWC 3 cut(s) 430, 1195, 1414
BslFI GGGAC 1 cut(s) 242
BslI CCNNNNNNNGG 5 cut(s) 248, 687, 713, 752, 1076
BsmAI GTCTC 5 cut(s) 130, 142, 367, 1001, 1130
BsmBI CGTCTC 2 cut(s) 142, 1130
BsmFI GGGAC 1 cut(s) 242
BsmI GAATGC 1 cut(s) 899
BsnI GGCC 2 cut(s) 191, 1325
Bsp119I TTCGAA 2 cut(s) 61, 109
Bsp1286I GDGCHC 4 cut(s) 200, 430, 1195, 1414
Bsp13I TCCGGA 3 cut(s) 234, 313, 1384
Bsp143I GATC 2 cut(s) 165, 1171
Bsp1720I GCTNAGC 1 cut(s) 396
Bsp19I CCATGG 3 cut(s) 1070, 1119, 1349
BspACI CCGC 7 cut(s) 192, 249, 443, 665, 681, 1326, 1399
BspANI GGCC 2 cut(s) 191, 1325
BspCNI CTCAG 3 cut(s) 409, 442, 586
BspEI TCCGGA 3 cut(s) 234, 313, 1384
BspFNI CGCG 2 cut(s) 194, 443
BspHI TCATGA 1 cut(s) 640
BspLI GGNNCC 9 cut(s) 230, 239, 567, 626, 733, 923, 1173, 1347, 1446
BspMAI CTGCAG 2 cut(s) 973, 1129
BspMI ACCTGC 1 cut(s) 962
BspPI GGATC 2 cut(s) 1166, 1179
BspT104I TTCGAA 2 cut(s) 61, 109
BspT107I GGYRCC 1 cut(s) 624
BspTI CTTAAG 1 cut(s) 1394
BsrDI GCAATG 1 cut(s) 1184
BsrFI RCCGGY 1 cut(s) 187
BsrI ACTGG 2 cut(s) 893, 925
BssAI RCCGGY 1 cut(s) 187
BssECI CCNNGG 7 cut(s) 100, 628, 995, 1070, 1119, 1349, 1462
BssMI GATC 2 cut(s) 165, 1171
BssNI GRCGYC 1 cut(s) 380
BssSI CACGAG 1 cut(s) 26
BssT1I CCWWGG 4 cut(s) 100, 1070, 1119, 1349
Bst2BI CACGAG 1 cut(s) 26
Bst2UI CCWGG 4 cut(s) 629, 996, 1176, 1464
Bst4CI ACNGT 5 cut(s) 124, 470, 673, 698, 1043
BstACI GRCGYC 1 cut(s) 380
BstAFI CTTAAG 1 cut(s) 1394
BstBI TTCGAA 2 cut(s) 61, 109
BstC8I GCNNGC 3 cut(s) 196, 1191, 1401
BstDEI CTNAG 3 cut(s) 396, 429, 573
BstDSI CCRYGG 3 cut(s) 1070, 1119, 1349
BstF5I GGATG 3 cut(s) 296, 761, 844
BstFNI CGCG 2 cut(s) 194, 443
BstHHI GCGC 1 cut(s) 443
BstKTI GATC 2 cut(s) 168, 1174
BstMAI GTCTC 5 cut(s) 130, 142, 367, 1001, 1130
BstMBI GATC 2 cut(s) 165, 1171
BstMCI CGRYCG 3 cut(s) 192, 681, 1419
BstMWI GCNNNNNNNGC 4 cut(s) 968, 1214, 1396, 1409
BstNI CCWGG 4 cut(s) 629, 996, 1176, 1464
BstSCI CCNGG 6 cut(s) 198, 225, 627, 994, 1174, 1462
BstSFI CTRYAG 3 cut(s) 969, 1125, 1404
BstUI CGCG 2 cut(s) 194, 443
BstV1I GCAGC 4 cut(s) 776, 1009, 1111, 1296
BstV2I GAAGAC 1 cut(s) 9
BstX2I RGATCY 1 cut(s) 1171
BstXI CCANNNNNNTGG 1 cut(s) 912
BstYI RGATCY 1 cut(s) 1171
BstZI CGGCCG 1 cut(s) 189
Bsu36I CCTNAGG 1 cut(s) 573
BsuRI GGCC 2 cut(s) 191, 1325
BtgI CCRYGG 3 cut(s) 1070, 1119, 1349
BtsCI GGATG 3 cut(s) 296, 761, 844
BtsI GCAGTG 1 cut(s) 20
BtsIMutI CAGTG 5 cut(s) 20, 475, 932, 1039, 1363
BveI ACCTGC 1 cut(s) 962
Cac8I GCNNGC 3 cut(s) 196, 1191, 1401
CaiI CAGNNNCTG 1 cut(s) 1208
CciI TCATGA 1 cut(s) 640
CfoI GCGC 1 cut(s) 443
Cfr10I RCCGGY 1 cut(s) 187
Cfr13I GGNCC 6 cut(s) 229, 237, 404, 922, 1116, 1346
CseI GACGC 2 cut(s) 388, 1147
Csp6I GTAC 6 cut(s) 295, 343, 454, 699, 1067, 1179
CviAII CATG 7 cut(s) 503, 641, 802, 1071, 1120, 1321, 1350
CviQI GTAC 6 cut(s) 295, 343, 454, 699, 1067, 1179
DdeI CTNAG 3 cut(s) 396, 429, 573
DpnI GATC 2 cut(s) 167, 1173
DpnII GATC 2 cut(s) 165, 1171
EaeI YGGCCR 2 cut(s) 189, 1323
EagI CGGCCG 1 cut(s) 189
Ecl136II GAGCTC 2 cut(s) 428, 1412
EclXI CGGCCG 1 cut(s) 189
Eco130I CCWWGG 4 cut(s) 100, 1070, 1119, 1349
Eco24I GRGCYC 3 cut(s) 200, 430, 1414
Eco47I GGWCC 6 cut(s) 229, 237, 404, 922, 1116, 1346
Eco52I CGGCCG 1 cut(s) 189
Eco53kI GAGCTC 2 cut(s) 428, 1412
Eco81I CCTNAGG 1 cut(s) 573
EcoICRI GAGCTC 2 cut(s) 428, 1412
EcoO109I RGGNCCY 1 cut(s) 229
EcoRI GAATTC 1 cut(s) 578
EcoRII CCWGG 4 cut(s) 627, 994, 1174, 1462
EcoT14I CCWWGG 4 cut(s) 100, 1070, 1119, 1349
EcoT22I ATGCAT 1 cut(s) 803
EcoT38I GRGCYC 3 cut(s) 200, 430, 1414
ErhI CCWWGG 4 cut(s) 100, 1070, 1119, 1349
Esp3I CGTCTC 2 cut(s) 142, 1130
FaeI CATG 7 cut(s) 506, 644, 805, 1074, 1123, 1324, 1353
FalI AAGNNNNNCTT 4 cut(s) 948, 980, 1197, 1229
FaqI GGGAC 1 cut(s) 242
FatI CATG 7 cut(s) 502, 640, 801, 1070, 1119, 1320, 1349
FauI CCCGC 3 cut(s) 242, 436, 1392
FauNDI CATATG 1 cut(s) 1143
FblI GTMKAC 1 cut(s) 204
Fnu4HI GCNGC 6 cut(s) 192, 765, 1023, 1125, 1285, 1326
FokI GGATG 3 cut(s) 303, 768, 851
FriOI GRGCYC 3 cut(s) 200, 430, 1414
Fsp4HI GCNGC 6 cut(s) 192, 765, 1023, 1125, 1285, 1326
FspBI CTAG 4 cut(s) 101, 408, 480, 948
GlaI GCGC 1 cut(s) 442
GluI GCNGC 6 cut(s) 192, 765, 1023, 1125, 1285, 1326
GsaI CCCAGC 1 cut(s) 1223
GsuI CTGGAG 1 cut(s) 124
HaeIII GGCC 2 cut(s) 191, 1325
HgaI GACGC 2 cut(s) 388, 1147
HhaI GCGC 1 cut(s) 443
Hin1I GRCGYC 1 cut(s) 380
Hin1II CATG 7 cut(s) 506, 644, 805, 1074, 1123, 1324, 1353
Hin6I GCGC 1 cut(s) 441
HinP1I GCGC 1 cut(s) 441
HincII GTYRAC 1 cut(s) 819
HindII GTYRAC 1 cut(s) 819
HinfI GANTC 9 cut(s) 5, 10, 82, 91, 310, 355, 420, 433, 476
HphI GGTGA 5 cut(s) 26, 160, 458, 734, 854
Hpy166II GTNNAC 3 cut(s) 205, 819, 1039
Hpy188I TCNGA 7 cut(s) 222, 276, 425, 432, 880, 1006, 1204
Hpy188III TCNNGA 7 cut(s) 235, 314, 352, 575, 641, 860, 1385
Hpy8I GTNNAC 3 cut(s) 205, 819, 1039
Hpy99I CGWCG 1 cut(s) 353
HpyAV CCTTC 5 cut(s) 593, 879, 935, 1360, 1421
HpyCH4III ACNGT 5 cut(s) 124, 470, 673, 698, 1043
HpyCH4IV ACGT 2 cut(s) 685, 1270
HpyCH4V TGCA 4 cut(s) 25, 801, 971, 1127
HpyF10VI GCNNNNNNNGC 4 cut(s) 968, 1214, 1396, 1409
HpyF3I CTNAG 3 cut(s) 396, 429, 573
HpySE526I ACGT 2 cut(s) 685, 1270
Hsp92I GRCGYC 1 cut(s) 380
Hsp92II CATG 7 cut(s) 506, 644, 805, 1074, 1123, 1324, 1353
HspAI GCGC 1 cut(s) 441
Kpn2I TCCGGA 3 cut(s) 234, 313, 1384
Kzo9I GATC 2 cut(s) 165, 1171
LmnI GCTCC 7 cut(s) 425, 737, 896, 1198, 1387, 1409, 1417
Lsp1109I GCAGC 4 cut(s) 776, 1009, 1111, 1296
LweI GCATC 1 cut(s) 853
MaeI CTAG 4 cut(s) 101, 408, 480, 948
MaeII ACGT 2 cut(s) 685, 1270
MaeIII GTNAC 3 cut(s) 446, 482, 610
MalI GATC 2 cut(s) 167, 1173
MboI GATC 2 cut(s) 165, 1171
MboII GAAGA 2 cut(s) 9, 485
MflI RGATCY 1 cut(s) 1171
MhlI GDGCHC 4 cut(s) 200, 430, 1195, 1414
MluCI AATT 9 cut(s) 115, 278, 578, 658, 708, 1061, 1151, 1253, 1438
MlyI GAGTC 2 cut(s) 19, 429
MmeI TCCRAC 5 cut(s) 366, 403, 806, 1220, 1318
Mph1103I ATGCAT 1 cut(s) 803
MroI TCCGGA 3 cut(s) 234, 313, 1384
MroXI GAANNNNTTC 2 cut(s) 115, 603
MseI TTAA 2 cut(s) 1311, 1395
MslI CAYNNNNRTG 3 cut(s) 261, 645, 1044
MspA1I CMGCKG 1 cut(s) 249
MspCI CTTAAG 1 cut(s) 1394
MspR9I CCNGG 6 cut(s) 200, 227, 629, 996, 1176, 1464
Mva1269I GAATGC 1 cut(s) 899
MvaI CCWGG 4 cut(s) 629, 996, 1176, 1464
MvnI CGCG 2 cut(s) 194, 443
MwoI GCNNNNNNNGC 4 cut(s) 968, 1214, 1396, 1409
NciI CCSGG 2 cut(s) 200, 227
NcoI CCATGG 3 cut(s) 1070, 1119, 1349
NdeI CATATG 1 cut(s) 1143
NdeII GATC 2 cut(s) 165, 1171
NlaIII CATG 7 cut(s) 506, 644, 805, 1074, 1123, 1324, 1353
NlaIV GGNNCC 9 cut(s) 230, 239, 567, 626, 733, 923, 1173, 1347, 1446
NmeAIII GCCGAG 1 cut(s) 417
NmuCI GTSAC 1 cut(s) 446
NsiI ATGCAT 1 cut(s) 803
NspV TTCGAA 2 cut(s) 61, 109
OliI CACNNNNGTG 1 cut(s) 1044
PagI TCATGA 1 cut(s) 640
PaqCI CACCTGC 1 cut(s) 962
PctI GAATGC 1 cut(s) 899
PdmI GAANNNNTTC 2 cut(s) 115, 603
PfeI GAWTC 7 cut(s) 5, 82, 91, 310, 355, 433, 476
PflMI CCANNNNNTGG 2 cut(s) 713, 1076
PkrI GCNGC 6 cut(s) 193, 766, 1024, 1126, 1286, 1327
PleI GAGTC 2 cut(s) 18, 428
PpsI GAGTC 2 cut(s) 18, 428
PpuMI RGGWCCY 1 cut(s) 229
Psp124BI GAGCTC 2 cut(s) 430, 1414
Psp5II RGGWCCY 1 cut(s) 229
Psp6I CCWGG 4 cut(s) 627, 994, 1174, 1462
PspFI CCCAGC 1 cut(s) 1219
PspGI CCWGG 4 cut(s) 627, 994, 1174, 1462
PspN4I GGNNCC 9 cut(s) 230, 239, 567, 626, 733, 923, 1173, 1347, 1446
PspPI GGNCC 6 cut(s) 229, 237, 404, 922, 1116, 1346
PspPPI RGGWCCY 1 cut(s) 229
PstI CTGCAG 2 cut(s) 973, 1129
PstNI CAGNNNCTG 1 cut(s) 1208
PsuI RGATCY 1 cut(s) 1171
RsaI GTAC 6 cut(s) 296, 344, 455, 700, 1068, 1180
RsaNI GTAC 6 cut(s) 295, 343, 454, 699, 1067, 1179
RseI CAYNNNNRTG 3 cut(s) 261, 645, 1044
SacI GAGCTC 2 cut(s) 430, 1414
SaqAI TTAA 2 cut(s) 1311, 1395
SatI GCNGC 6 cut(s) 192, 765, 1023, 1125, 1285, 1326
Sau3AI GATC 2 cut(s) 165, 1171
Sau96I GGNCC 6 cut(s) 229, 237, 404, 922, 1116, 1346
SchI GAGTC 2 cut(s) 19, 429
ScrFI CCNGG 6 cut(s) 200, 227, 629, 996, 1176, 1464
SduI GDGCHC 4 cut(s) 200, 430, 1195, 1414
SfaNI GCATC 1 cut(s) 853
SfcI CTRYAG 3 cut(s) 969, 1125, 1404
SfuI TTCGAA 2 cut(s) 61, 109
SinI GGWCC 6 cut(s) 229, 237, 404, 922, 1116, 1346
SmiMI CAYNNNNRTG 3 cut(s) 261, 645, 1044
SmlI CTYRAG 1 cut(s) 1394
SmoI CTYRAG 1 cut(s) 1394
Sse9I AATT 9 cut(s) 115, 278, 578, 658, 708, 1061, 1151, 1253, 1438
SsiI CCGC 7 cut(s) 192, 249, 443, 665, 681, 1326, 1399
SspMI CTAG 4 cut(s) 101, 408, 480, 948
SstI GAGCTC 2 cut(s) 430, 1414
StyD4I CCNGG 6 cut(s) 198, 225, 627, 994, 1174, 1462
StyI CCWWGG 4 cut(s) 100, 1070, 1119, 1349
TaaI ACNGT 5 cut(s) 124, 470, 673, 698, 1043
TaiI ACGT 2 cut(s) 688, 1273
TaqI TCGA 7 cut(s) 8, 61, 109, 261, 308, 351, 1419
TasI AATT 9 cut(s) 115, 278, 578, 658, 708, 1061, 1151, 1253, 1438
TatI WGTACW 2 cut(s) 342, 453
TauI GCSGC 2 cut(s) 194, 1328
TfiI GAWTC 7 cut(s) 5, 82, 91, 310, 355, 433, 476
Tru1I TTAA 2 cut(s) 1311, 1395
Tru9I TTAA 2 cut(s) 1311, 1395
TscAI CASTG 5 cut(s) 27, 475, 932, 1046, 1363
TseFI GTSAC 1 cut(s) 446
TseI GCWGC 4 cut(s) 764, 1022, 1124, 1284
Tsp45I GTSAC 1 cut(s) 446
TspDTI ATGAA 2 cut(s) 629, 1074
TspGWI ACGGA 6 cut(s) 118, 124, 334, 337, 356, 417
TspRI CASTG 5 cut(s) 27, 475, 932, 1046, 1363
Van91I CCANNNNNTGG 2 cut(s) 713, 1076
Vha464I CTTAAG 1 cut(s) 1394
VpaK11BI GGWCC 6 cut(s) 229, 237, 404, 922, 1116, 1346
XapI RAATTY 3 cut(s) 278, 578, 1061
XcmI CCANNNNNNNNNTGG 1 cut(s) 714
XmaJI CCTAGG 1 cut(s) 100
XmiI GTMKAC 1 cut(s) 204
XmnI GAANNNNTTC 2 cut(s) 115, 603
XspI CTAG 4 cut(s) 101, 408, 480, 948
Zsp2I ATGCAT 1 cut(s) 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.