Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g01211 FvH4_7g01230 FvH4_7g01242 |
| rosa_chinensis | RchiOBHm_Chr1g0316481 RchiOBHm_Chr1g0316791 RchiOBHm_Chr1g0316891 |
| rosa_laevigata | RLG00000030638 RLG00000030657 RLG00000030663 RLG00000030666 RLG00000030668 RLG00000030669 |
| rosa_multiflora | Rmu_sc0003008.1_g000045 Rmu_sc0006790.1_g000010 Rmu_sc0007472.1_g000007 Rmu_sc0015213.1_g000015 Rmu_sc0015224.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00330780 Rroxscaffold_4G00330960 |
| rosa_rugosa | Rorug01G0011300 Rorug01G0012600 Rorug01G0012600 Rorug01G0012600 Rorug01G0012900 Rorug01G0013000 Rorug01G0013100 Rorug01G0013200.1 Rorug01G0013300 Rorug01G0013400 Rorug01G0013400 |
| rosa_samantha | Rh1AG020700 Rh1AG021000 Rh1AG022900 Rh1AG024100 Rh1AG024400 Rh1BG016100 Rh1BG016400 Rh1CG019900 Rh1CG020700 Rh1CG022400 Rh1CG022700 Rh1DG016100 Rh1DG016500 Rh1DG017500 Rh1DG018300 Rh1DG020600 Rh1DG021500 |
| rosa_wichuraiana | Rw1G001360 Rw1G001380 Rw1G001500 Rw1G001570 Rw1G001660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 179 |
| AclWI | GGATC | 2 cut(s) | 185, 241 |
| AfaI | GTAC | 1 cut(s) | 24 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 179, 230 |
| AjnI | CCWGG | 1 cut(s) | 46 |
| AluBI | AGCT | 2 cut(s) | 74, 250 |
| AluI | AGCT | 2 cut(s) | 74, 250 |
| AlwI | GGATC | 2 cut(s) | 185, 241 |
| AspLEI | GCGC | 1 cut(s) | 172 |
| BccI | CCATC | 1 cut(s) | 184 |
| BciT130I | CCWGG | 1 cut(s) | 48 |
| BfoI | RGCGCY | 1 cut(s) | 173 |
| Bme1390I | CCNGG | 1 cut(s) | 48 |
| BmrFI | CCNGG | 1 cut(s) | 48 |
| BmsI | GCATC | 1 cut(s) | 145 |
| BsaJI | CCNNGG | 1 cut(s) | 47 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 179, 230 |
| Bse3DI | GCAATG | 1 cut(s) | 91 |
| BseBI | CCWGG | 1 cut(s) | 48 |
| BseDI | CCNNGG | 1 cut(s) | 47 |
| BseGI | GGATG | 1 cut(s) | 160 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 179, 230 |
| BseMI | GCAATG | 1 cut(s) | 91 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 179, 230 |
| Bsp143I | GATC | 2 cut(s) | 190, 233 |
| BspPI | GGATC | 2 cut(s) | 185, 241 |
| BsrDI | GCAATG | 1 cut(s) | 91 |
| BssECI | CCNNGG | 1 cut(s) | 47 |
| BssMI | GATC | 2 cut(s) | 190, 233 |
| Bst2UI | CCWGG | 1 cut(s) | 48 |
| BstDEI | CTNAG | 1 cut(s) | 261 |
| BstF5I | GGATG | 1 cut(s) | 160 |
| BstH2I | RGCGCY | 1 cut(s) | 173 |
| BstHHI | GCGC | 1 cut(s) | 172 |
| BstKTI | GATC | 2 cut(s) | 193, 236 |
| BstMBI | GATC | 2 cut(s) | 190, 233 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 80 |
| BstNI | CCWGG | 1 cut(s) | 48 |
| BstSCI | CCNGG | 1 cut(s) | 46 |
| BtgZI | GCGATG | 1 cut(s) | 21 |
| BtsCI | GGATG | 1 cut(s) | 160 |
| CfoI | GCGC | 1 cut(s) | 172 |
| Csp6I | GTAC | 1 cut(s) | 23 |
| CviAII | CATG | 2 cut(s) | 88, 103 |
| CviJI | RGCY | 3 cut(s) | 57, 74, 250 |
| CviKI_1 | RGCY | 3 cut(s) | 57, 74, 250 |
| CviQI | GTAC | 1 cut(s) | 23 |
| DdeI | CTNAG | 1 cut(s) | 261 |
| DpnI | GATC | 2 cut(s) | 192, 235 |
| DpnII | GATC | 2 cut(s) | 190, 233 |
| EcoRII | CCWGG | 1 cut(s) | 46 |
| EcoT22I | ATGCAT | 1 cut(s) | 93 |
| FaeI | CATG | 2 cut(s) | 91, 106 |
| FaiI | YATR | 7 cut(s) | 39, 89, 104, 206, 210, 229, 258 |
| FatI | CATG | 2 cut(s) | 87, 102 |
| FokI | GGATG | 1 cut(s) | 167 |
| GlaI | GCGC | 1 cut(s) | 171 |
| HaeII | RGCGCY | 1 cut(s) | 173 |
| HhaI | GCGC | 1 cut(s) | 172 |
| Hin1II | CATG | 2 cut(s) | 91, 106 |
| Hin6I | GCGC | 1 cut(s) | 170 |
| HinP1I | GCGC | 1 cut(s) | 170 |
| Hpy188III | TCNNGA | 1 cut(s) | 140 |
| HpyCH4V | TGCA | 3 cut(s) | 91, 96, 158 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 80 |
| HpyF3I | CTNAG | 1 cut(s) | 261 |
| Hsp92II | CATG | 2 cut(s) | 91, 106 |
| HspAI | GCGC | 1 cut(s) | 170 |
| Kzo9I | GATC | 2 cut(s) | 190, 233 |
| LmnI | GCTCC | 1 cut(s) | 167 |
| LpnPI | CCDG | 5 cut(s) | 33, 60, 153, 165, 174 |
| LweI | GCATC | 1 cut(s) | 145 |
| MalI | GATC | 2 cut(s) | 192, 235 |
| MboI | GATC | 2 cut(s) | 190, 233 |
| MluCI | AATT | 1 cut(s) | 135 |
| MmeI | TCCRAC | 1 cut(s) | 145 |
| MnlI | CCTC | 1 cut(s) | 231 |
| Mph1103I | ATGCAT | 1 cut(s) | 93 |
| MseI | TTAA | 1 cut(s) | 117 |
| MslI | CAYNNNNRTG | 1 cut(s) | 101 |
| MspR9I | CCNGG | 1 cut(s) | 48 |
| MvaI | CCWGG | 1 cut(s) | 48 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 80 |
| NdeII | GATC | 2 cut(s) | 190, 233 |
| NlaIII | CATG | 2 cut(s) | 91, 106 |
| NsiI | ATGCAT | 1 cut(s) | 93 |
| PflFI | GACNNNGTC | 1 cut(s) | 146 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 179 |
| Psp6I | CCWGG | 1 cut(s) | 46 |
| PspGI | CCWGG | 1 cut(s) | 46 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 234 |
| PsyI | GACNNNGTC | 1 cut(s) | 146 |
| RsaI | GTAC | 1 cut(s) | 24 |
| RsaNI | GTAC | 1 cut(s) | 23 |
| RseI | CAYNNNNRTG | 1 cut(s) | 101 |
| SaqAI | TTAA | 1 cut(s) | 117 |
| Sau3AI | GATC | 2 cut(s) | 190, 233 |
| ScrFI | CCNGG | 1 cut(s) | 48 |
| SetI | ASST | 4 cut(s) | 49, 76, 163, 252 |
| SfaNI | GCATC | 1 cut(s) | 145 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 101 |
| Sse9I | AATT | 1 cut(s) | 135 |
| StyD4I | CCNGG | 1 cut(s) | 46 |
| TasI | AATT | 1 cut(s) | 135 |
| Tru1I | TTAA | 1 cut(s) | 117 |
| Tru9I | TTAA | 1 cut(s) | 117 |
| TspDTI | ATGAA | 2 cut(s) | 76, 119 |
| TspGWI | ACGGA | 1 cut(s) | 246 |
| Tth111I | GACNNNGTC | 1 cut(s) | 146 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 179 |
| Zsp2I | ATGCAT | 1 cut(s) | 93 |