Rh2AG113100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
10120648 .. 10120881
234 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG113100.1

Sequence Viewer

Length: 234 bp
ATGGGTCGGGTTCGAGTGCTATGTGTTGCTCAGAACACAGGGAAGAGTGTTGGGCTCTGTGTTGCTTCGTTGAGCTCTATCTTCCAAGGTTGCCACGAACAACACCGCCGCCACCAACCCTGTAGCCGTACCACCACCGTTGCTACTACCCCGAGTTCACGGTCACAGCGCGACCGCAATGGGAGTTCATTGGTCGAATCCAAGTTGGGTACTGCTGATGGGTTATCCTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

77

Amino Acids

8.29

Weight (kDa)

10.14

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 171
AciI CCGC 3 cut(s) 106, 109, 175
AfaI GTAC 2 cut(s) 130, 211
AjnI CCWGG 1 cut(s) 227
AluBI AGCT 1 cut(s) 75
AluI AGCT 1 cut(s) 75
Alw21I GWGCWC 1 cut(s) 77
Ama87I CYCGRG 1 cut(s) 151
AspLEI GCGC 1 cut(s) 171
AvaI CYCGRG 1 cut(s) 151
BanII GRGCYC 2 cut(s) 57, 77
Bbv12I GWGCWC 1 cut(s) 77
BccI CCATC 1 cut(s) 212
BceAI ACGGC 1 cut(s) 111
BciT130I CCWGG 1 cut(s) 229
BfmI CTRYAG 1 cut(s) 121
BisI GCNGC 1 cut(s) 109
BlsI GCNGC 1 cut(s) 110
Bme1390I CCNGG 1 cut(s) 229
BmeT110I CYCGRG 1 cut(s) 151
BmrFI CCNGG 1 cut(s) 229
BsaJI CCNNGG 1 cut(s) 85
Bse3DI GCAATG 1 cut(s) 184
BseBI CCWGG 1 cut(s) 229
BseDI CCNNGG 1 cut(s) 85
BseMI GCAATG 1 cut(s) 184
BseMII CTCAG 1 cut(s) 44
Bsh1236I CGCG 1 cut(s) 171
Bsh1285I CGRYCG 1 cut(s) 175
BsiEI CGRYCG 1 cut(s) 175
BsiHKAI GWGCWC 1 cut(s) 77
BsiHKCI CYCGRG 1 cut(s) 151
BsoBI CYCGRG 1 cut(s) 151
Bsp1286I GDGCHC 2 cut(s) 57, 77
BspACI CCGC 3 cut(s) 106, 109, 175
BspCNI CTCAG 1 cut(s) 43
BspFNI CGCG 1 cut(s) 171
BsrDI GCAATG 1 cut(s) 184
BssECI CCNNGG 1 cut(s) 85
BssT1I CCWWGG 1 cut(s) 85
Bst2UI CCWGG 1 cut(s) 229
Bst4CI ACNGT 2 cut(s) 139, 162
Bst6I CTCTTC 1 cut(s) 38
BstDEI CTNAG 1 cut(s) 30
BstFNI CGCG 1 cut(s) 171
BstHHI GCGC 1 cut(s) 171
BstMCI CGRYCG 1 cut(s) 175
BstNI CCWGG 1 cut(s) 229
BstSCI CCNGG 1 cut(s) 227
BstSFI CTRYAG 1 cut(s) 121
BstUI CGCG 1 cut(s) 171
CfoI GCGC 1 cut(s) 171
Csp6I GTAC 2 cut(s) 129, 210
CspCI CAANNNNNGTGG 2 cut(s) 121, 156
CviJI RGCY 3 cut(s) 55, 75, 126
CviKI_1 RGCY 3 cut(s) 55, 75, 126
CviQI GTAC 2 cut(s) 129, 210
DdeI CTNAG 1 cut(s) 30
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
Ecl136II GAGCTC 1 cut(s) 75
Eco130I CCWWGG 1 cut(s) 85
Eco24I GRGCYC 2 cut(s) 57, 77
Eco53kI GAGCTC 1 cut(s) 75
Eco88I CYCGRG 1 cut(s) 151
EcoICRI GAGCTC 1 cut(s) 75
EcoRII CCWGG 1 cut(s) 227
EcoT14I CCWWGG 1 cut(s) 85
EcoT38I GRGCYC 2 cut(s) 57, 77
ErhI CCWWGG 1 cut(s) 85
FaiI YATR 1 cut(s) 22
Fnu4HI GCNGC 1 cut(s) 109
FriOI GRGCYC 2 cut(s) 57, 77
Fsp4HI GCNGC 1 cut(s) 109
GlaI GCGC 1 cut(s) 170
GluI GCNGC 1 cut(s) 109
HhaI GCGC 1 cut(s) 171
Hin6I GCGC 1 cut(s) 169
HinP1I GCGC 1 cut(s) 169
HinfI GANTC 1 cut(s) 197
Hpy166II GTNNAC 1 cut(s) 158
Hpy188I TCNGA 1 cut(s) 33
Hpy8I GTNNAC 1 cut(s) 158
HpyCH4III ACNGT 2 cut(s) 139, 162
HpyF3I CTNAG 1 cut(s) 30
HspAI GCGC 1 cut(s) 169
LpnPI CCDG 3 cut(s) 24, 133, 214
MaeIII GTNAC 1 cut(s) 162
MboII GAAGA 2 cut(s) 55, 73
MhlI GDGCHC 2 cut(s) 57, 77
MspR9I CCNGG 1 cut(s) 229
MvaI CCWGG 1 cut(s) 229
MvnI CGCG 1 cut(s) 171
NmuCI GTSAC 1 cut(s) 162
PfeI GAWTC 1 cut(s) 197
PkrI GCNGC 1 cut(s) 110
Psp124BI GAGCTC 1 cut(s) 77
Psp6I CCWGG 1 cut(s) 227
PspGI CCWGG 1 cut(s) 227
RsaI GTAC 2 cut(s) 130, 211
RsaNI GTAC 2 cut(s) 129, 210
SacI GAGCTC 1 cut(s) 77
SatI GCNGC 1 cut(s) 109
ScrFI CCNGG 1 cut(s) 229
SduI GDGCHC 2 cut(s) 57, 77
SetI ASST 2 cut(s) 77, 91
SfcI CTRYAG 1 cut(s) 121
SsiI CCGC 3 cut(s) 106, 109, 175
SstI GAGCTC 1 cut(s) 77
StyD4I CCNGG 1 cut(s) 227
StyI CCWWGG 1 cut(s) 85
TaaI ACNGT 2 cut(s) 139, 162
TaqI TCGA 2 cut(s) 13, 195
TauI GCSGC 1 cut(s) 111
TfiI GAWTC 1 cut(s) 197
TseFI GTSAC 1 cut(s) 162
Tsp45I GTSAC 1 cut(s) 162
TspDTI ATGAA 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.