Rh4CG042900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
8690208 .. 8690465
258 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG042900.1

Sequence Viewer

Length: 258 bp
ATGGTACTCTTTGTCGATGAAGAAGTCGAGGTCAGGCTCACGCACCCGGAAGCGCGTGACGGCGGAGCGCACCCAAGAGTAGACATGGGAGGTGTAGTACTGGTAGAAGATGAAAGAGAGGGAGAAGGTTTTGATCGGAGAATTGGGGCGGAGAATGAGAGCGCGATTGACGAACTCGGAGAAGCCGTGGCTCGTGACGGGGAGGGGTTCGGAGTCGTTGACCGGGAAGAGGTGGTAGGAGAAGTCGAGGAAGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

85

Amino Acids

9.22

Weight (kDa)

4.13

Isoelectric Point (pI)

22.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 81
AccII CGCG 2 cut(s) 55, 164
AciI CCGC 2 cut(s) 63, 149
AfaI GTAC 2 cut(s) 6, 99
AfiI CCNNNNNNNGG 1 cut(s) 229
AspLEI GCGC 3 cut(s) 55, 70, 164
AsuC2I CCSGG 2 cut(s) 47, 224
BauI CACGAG 1 cut(s) 192
BceAI ACGGC 2 cut(s) 76, 170
BcnI CCSGG 2 cut(s) 47, 224
BmcAI AGTACT 1 cut(s) 99
Bme1390I CCNGG 2 cut(s) 47, 224
BmrFI CCNGG 2 cut(s) 47, 224
BpuMI CCSGG 2 cut(s) 47, 224
BsaJI CCNNGG 1 cut(s) 186
BsaXI ACNNNNNCTCC 4 cut(s) 81, 111, 171, 201
Bsc4I CCNNNNNNNGG 1 cut(s) 229
Bse1I ACTGG 1 cut(s) 105
BseDI CCNNGG 1 cut(s) 186
BseLI CCNNNNNNNGG 1 cut(s) 229
BseNI ACTGG 1 cut(s) 105
Bsh1236I CGCG 2 cut(s) 55, 164
BsiSI CCGG 2 cut(s) 47, 223
BslI CCNNNNNNNGG 1 cut(s) 229
Bsp143I GATC 1 cut(s) 133
BspACI CCGC 2 cut(s) 63, 149
BspFNI CGCG 2 cut(s) 55, 164
BsrI ACTGG 1 cut(s) 105
BssECI CCNNGG 1 cut(s) 186
BssMI GATC 1 cut(s) 133
BssSI CACGAG 1 cut(s) 192
Bst2BI CACGAG 1 cut(s) 192
Bst6I CTCTTC 1 cut(s) 222
BstDSI CCRYGG 1 cut(s) 186
BstFNI CGCG 2 cut(s) 55, 164
BstHHI GCGC 3 cut(s) 55, 70, 164
BstKTI GATC 1 cut(s) 136
BstMBI GATC 1 cut(s) 133
BstSCI CCNGG 2 cut(s) 45, 222
BstUI CGCG 2 cut(s) 55, 164
BtgI CCRYGG 1 cut(s) 186
CfoI GCGC 3 cut(s) 55, 70, 164
Csp6I GTAC 2 cut(s) 5, 98
CviAII CATG 1 cut(s) 85
CviJI RGCY 3 cut(s) 37, 185, 191
CviKI_1 RGCY 3 cut(s) 37, 185, 191
CviQI GTAC 2 cut(s) 5, 98
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
Eam1104I CTCTTC 1 cut(s) 222
EarI CTCTTC 1 cut(s) 222
EciI GGCGGA 2 cut(s) 78, 164
FaeI CATG 1 cut(s) 88
FaiI YATR 1 cut(s) 86
FatI CATG 1 cut(s) 84
FblI GTMKAC 1 cut(s) 81
GlaI GCGC 3 cut(s) 54, 69, 163
HapII CCGG 2 cut(s) 47, 223
HhaI GCGC 3 cut(s) 55, 70, 164
Hin1II CATG 1 cut(s) 88
Hin6I GCGC 3 cut(s) 53, 68, 162
HinP1I GCGC 3 cut(s) 53, 68, 162
HincII GTYRAC 1 cut(s) 220
HindII GTYRAC 1 cut(s) 220
HinfI GANTC 1 cut(s) 213
HpaII CCGG 2 cut(s) 47, 223
Hpy166II GTNNAC 2 cut(s) 82, 220
Hpy188I TCNGA 3 cut(s) 138, 179, 212
Hpy188III TCNNGA 1 cut(s) 194
Hpy8I GTNNAC 2 cut(s) 82, 220
HpyAV CCTTC 2 cut(s) 119, 245
Hsp92II CATG 1 cut(s) 88
HspAI GCGC 3 cut(s) 53, 68, 162
Kzo9I GATC 1 cut(s) 133
LmnI GCTCC 1 cut(s) 65
LpnPI CCDG 4 cut(s) 19, 60, 86, 236
MaeIII GTNAC 2 cut(s) 56, 194
MalI GATC 1 cut(s) 135
MboI GATC 1 cut(s) 133
MboII GAAGA 3 cut(s) 32, 119, 239
MluCI AATT 1 cut(s) 141
MlyI GAGTC 1 cut(s) 222
MnlI CCTC 6 cut(s) 22, 83, 112, 196, 223, 241
MspI CCGG 2 cut(s) 47, 223
MspR9I CCNGG 2 cut(s) 47, 224
MvnI CGCG 2 cut(s) 55, 164
NciI CCSGG 2 cut(s) 47, 224
NdeII GATC 1 cut(s) 133
NlaIII CATG 1 cut(s) 88
NmuCI GTSAC 2 cut(s) 56, 194
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PleI GAGTC 1 cut(s) 221
PpsI GAGTC 1 cut(s) 221
RsaI GTAC 2 cut(s) 6, 99
RsaNI GTAC 2 cut(s) 5, 98
Sau3AI GATC 1 cut(s) 133
ScaI AGTACT 1 cut(s) 99
SchI GAGTC 1 cut(s) 222
ScrFI CCNGG 2 cut(s) 47, 224
SetI ASST 4 cut(s) 33, 94, 130, 234
Sse9I AATT 1 cut(s) 141
SsiI CCGC 2 cut(s) 63, 149
StyD4I CCNGG 2 cut(s) 45, 222
TaqI TCGA 3 cut(s) 15, 27, 246
TasI AATT 1 cut(s) 141
TatI WGTACW 1 cut(s) 97
TseFI GTSAC 2 cut(s) 56, 194
Tsp45I GTSAC 2 cut(s) 56, 194
TspDTI ATGAA 2 cut(s) 33, 126
XmiI GTMKAC 1 cut(s) 81
ZrmI AGTACT 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.