Rh2CG089900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
7354458 .. 7355122
665 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG089900.1

Sequence Viewer

Length: 225 bp
ATGGTACTCTTTGTCGATGAAGAAGTCGAGGTCAGGCTCACGCACCCAAGAGTCGACGTGGGAGGTGTAGTATTGGTAGAAGATGAAAGAGAGGCGGAAGGTTTTGATCGGAGAATTGGGGCGGAGAATGAGAGCGCGGTTGACGAACTCGGCGAAGCCGTGGCTCGTGATGGGGAGGGGTTCGGCGTCGTTGACCGGGAAGAGGTGGTAGGAGAAGTCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

74

Amino Acids

8.11

Weight (kDa)

4.11

Isoelectric Point (pI)

16.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 54
AccII CGCG 1 cut(s) 137
AciI CCGC 3 cut(s) 95, 122, 137
AcyI GRCGYC 1 cut(s) 186
AfaI GTAC 1 cut(s) 6
AfiI CCNNNNNNNGG 1 cut(s) 202
AjiI CACGTC 1 cut(s) 58
AspLEI GCGC 1 cut(s) 137
AsuC2I CCSGG 1 cut(s) 197
BauI CACGAG 1 cut(s) 165
BccI CCATC 1 cut(s) 164
BceAI ACGGC 1 cut(s) 143
BcnI CCSGG 1 cut(s) 197
Bme1390I CCNGG 1 cut(s) 197
BmgBI CACGTC 1 cut(s) 58
BmrFI CCNGG 1 cut(s) 197
BpuMI CCSGG 1 cut(s) 197
BsaHI GRCGYC 1 cut(s) 186
BsaJI CCNNGG 1 cut(s) 159
BsaXI ACNNNNNCTCC 2 cut(s) 54, 84
Bsc4I CCNNNNNNNGG 1 cut(s) 202
BseDI CCNNGG 1 cut(s) 159
BseLI CCNNNNNNNGG 1 cut(s) 202
Bsh1236I CGCG 1 cut(s) 137
BsiSI CCGG 1 cut(s) 196
BslI CCNNNNNNNGG 1 cut(s) 202
Bsp143I GATC 1 cut(s) 106
BspACI CCGC 3 cut(s) 95, 122, 137
BspFNI CGCG 1 cut(s) 137
BssECI CCNNGG 1 cut(s) 159
BssMI GATC 1 cut(s) 106
BssNI GRCGYC 1 cut(s) 186
BssSI CACGAG 1 cut(s) 165
Bst2BI CACGAG 1 cut(s) 165
Bst6I CTCTTC 1 cut(s) 195
BstACI GRCGYC 1 cut(s) 186
BstDSI CCRYGG 1 cut(s) 159
BstFNI CGCG 1 cut(s) 137
BstHHI GCGC 1 cut(s) 137
BstKTI GATC 1 cut(s) 109
BstMBI GATC 1 cut(s) 106
BstSCI CCNGG 1 cut(s) 195
BstUI CGCG 1 cut(s) 137
BtgI CCRYGG 1 cut(s) 159
BtrI CACGTC 1 cut(s) 58
CfoI GCGC 1 cut(s) 137
CseI GACGC 1 cut(s) 175
Csp6I GTAC 1 cut(s) 5
CviJI RGCY 3 cut(s) 37, 158, 164
CviKI_1 RGCY 3 cut(s) 37, 158, 164
CviQI GTAC 1 cut(s) 5
DpnI GATC 1 cut(s) 108
DpnII GATC 1 cut(s) 106
Eam1104I CTCTTC 1 cut(s) 195
EarI CTCTTC 1 cut(s) 195
EciI GGCGGA 2 cut(s) 110, 137
FblI GTMKAC 1 cut(s) 54
GlaI GCGC 1 cut(s) 136
HapII CCGG 1 cut(s) 196
HgaI GACGC 1 cut(s) 175
HhaI GCGC 1 cut(s) 137
Hin1I GRCGYC 1 cut(s) 186
Hin6I GCGC 1 cut(s) 135
HinP1I GCGC 1 cut(s) 135
HincII GTYRAC 3 cut(s) 55, 142, 193
HindII GTYRAC 3 cut(s) 55, 142, 193
HinfI GANTC 1 cut(s) 51
HpaII CCGG 1 cut(s) 196
Hpy166II GTNNAC 3 cut(s) 55, 142, 193
Hpy188I TCNGA 1 cut(s) 111
Hpy188III TCNNGA 1 cut(s) 167
Hpy8I GTNNAC 3 cut(s) 55, 142, 193
Hpy99I CGWCG 2 cut(s) 59, 191
HpyAV CCTTC 1 cut(s) 92
HpyCH4IV ACGT 1 cut(s) 57
HpySE526I ACGT 1 cut(s) 57
Hsp92I GRCGYC 1 cut(s) 186
HspAI GCGC 1 cut(s) 135
Kzo9I GATC 1 cut(s) 106
LpnPI CCDG 2 cut(s) 19, 209
MaeII ACGT 1 cut(s) 57
MalI GATC 1 cut(s) 108
MboI GATC 1 cut(s) 106
MboII GAAGA 3 cut(s) 32, 92, 212
MluCI AATT 1 cut(s) 114
MlyI GAGTC 1 cut(s) 60
MnlI CCTC 5 cut(s) 22, 56, 85, 169, 196
MspI CCGG 1 cut(s) 196
MspR9I CCNGG 1 cut(s) 197
MvnI CGCG 1 cut(s) 137
NciI CCSGG 1 cut(s) 197
NdeII GATC 1 cut(s) 106
NmeAIII GCCGAG 1 cut(s) 129
PcsI WCGNNNNNNNCGW 2 cut(s) 150, 156
PleI GAGTC 1 cut(s) 59
PpsI GAGTC 1 cut(s) 59
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
SalI GTCGAC 1 cut(s) 53
Sau3AI GATC 1 cut(s) 106
SchI GAGTC 1 cut(s) 60
ScrFI CCNGG 1 cut(s) 197
SetI ASST 5 cut(s) 33, 60, 67, 103, 207
Sse9I AATT 1 cut(s) 114
SsiI CCGC 3 cut(s) 95, 122, 137
StyD4I CCNGG 1 cut(s) 195
TaiI ACGT 1 cut(s) 60
TaqI TCGA 4 cut(s) 15, 27, 54, 219
TasI AATT 1 cut(s) 114
TspDTI ATGAA 2 cut(s) 33, 99
XmiI GTMKAC 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.