Rh2BG565700
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
77845498 .. 77862774
17277 bp
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UTR
Exon/CDS
Intron
Rh2BG565700.1

Sequence Viewer

Length: 861 bp
ATGGCATGGAATAATAGTGATCCTAGTTTCAGCTTAAGGGCAAACAGTGGGAAAGGTATTTCAAGAGCTAACCTTGTGACAAAGCTTAATTTATTGAAGGTTCCACATGAGCTCTCTTTGCATTTGAATGATTTTGTCCGTTCAAAGGATTGCAGTTCCTCTATCAATATTTCTGTACTTTTTGGGAAGCTGGGTTTTCTAAGACAGAAGCTATCTGGCCAAGGGCTTGCATTTATAATTGCAGGTGGATCTGTACGTAGATCAAACTTTGAGAAACTTTTAAGAGAGATACATGTGCGCAAGAGACCACGTAACAAAAAGGAATTGGCAAAGAATGAGGAAGACATAATAGACAAACTTTCCAACTCTGTAACAGTTCATGAGACTAAGCTCAAGAGCCGGCTGAATACAGATGATGCCTCCTTCTTTTACTTCTTCCTGCCATTGGGATGTAAAAAGTTGACAACATATGTGGAGAAACATGAGTTTGTTTTTGATGCAGTGCTGAATGAGGAAGTGTCTAATGATGAGGACAGTGATTGGAAGAAGAATTCAGTGTTCAGCACAAGCACCACCTCCAGCTTGGCTAGGAAGTGCTTTTCCGGAGCCAGGCCAGAGGACTTGAGATGGTCCAAAAGCCTAGTTCTGTTGTTGGATCTACTGGTTCCATTGGAACCCAGCTTCGATCTGATGGCGGCGGTGGCCGCCGCCAGAGCTGCTGTGATTCTGTACTACATGTTTGGCCGGAGAGCGTCGTCCAAGCGGAGATTTCTCCAAGTCGAGATCAGCGAGGAAGAGGCTTTGTCGGCGACCGGCTCAGGCGCCGGCCACGTGGATCGAGTCAATGTCCACCTTGTCTGA

Protein Analysis

286

Amino Acids

32.04

Weight (kDa)

9.45

Isoelectric Point (pI)

48.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 236
AarI CACCTGC 1 cut(s) 233
Acc16I TGCGCA 1 cut(s) 299
Acc36I ACCTGC 1 cut(s) 233
AccB1I GGYRCC 1 cut(s) 821
AccIII TCCGGA 1 cut(s) 602
AciI CCGC 5 cut(s) 695, 698, 705, 708, 763
AclWI GGATC 4 cut(s) 14, 256, 663, 843
AcoI YGGCCR 4 cut(s) 217, 702, 742, 826
AcsI RAATTY 1 cut(s) 550
AcvI CACGTG 1 cut(s) 832
AcyI GRCGYC 1 cut(s) 822
AfaI GTAC 3 cut(s) 177, 255, 731
AfiI CCNNNNNNNGG 3 cut(s) 145, 445, 609
AflII CTTAAG 1 cut(s) 34
AflIII ACRYGT 2 cut(s) 292, 735
AgsI TTSAA 4 cut(s) 63, 97, 127, 144
AjnI CCWGG 1 cut(s) 608
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 2 cut(s) 298, 377
AlwI GGATC 4 cut(s) 14, 256, 663, 843
Aor13HI TCCGGA 1 cut(s) 602
AoxI GGCC 5 cut(s) 217, 611, 702, 742, 826
ApeKI GCWGC 1 cut(s) 716
ApoI RAATTY 1 cut(s) 550
AspLEI GCGC 2 cut(s) 300, 824
AspS9I GGNCC 1 cut(s) 630
AvaII GGWCC 1 cut(s) 630
BalI TGGCCA 1 cut(s) 219
BanI GGYRCC 1 cut(s) 821
BanII GRGCYC 1 cut(s) 114
BbrPI CACGTG 1 cut(s) 832
BbsI GAAGAC 1 cut(s) 348
Bbv12I GWGCWC 1 cut(s) 114
BbvI GCAGC 1 cut(s) 703
BccI CCATC 2 cut(s) 621, 685
BciT130I CCWGG 1 cut(s) 610
BcoDI GTCTC 2 cut(s) 298, 377
BfaI CTAG 3 cut(s) 24, 588, 641
BfoI RGCGCY 1 cut(s) 825
BfrI CTTAAG 1 cut(s) 34
BfuAI ACCTGC 1 cut(s) 233
BisI GCNGC 4 cut(s) 696, 705, 708, 717
BlsI GCNGC 4 cut(s) 697, 706, 709, 718
Bme1390I CCNGG 1 cut(s) 610
Bme18I GGWCC 1 cut(s) 630
BmgT120I GGNCC 1 cut(s) 630
BmiI GGNNCC 5 cut(s) 102, 607, 666, 675, 823
BmrFI CCNGG 1 cut(s) 610
BmsI GCATC 2 cut(s) 406, 487
BpiI GAAGAC 1 cut(s) 348
BpmI CTGGAG 1 cut(s) 562
Bpu10I CCTNAGC 1 cut(s) 817
BpuEI CTTGAG 2 cut(s) 377, 643
BsaAI YACGTR 3 cut(s) 257, 311, 832
BsaHI GRCGYC 1 cut(s) 822
BsaI GGTCTC 1 cut(s) 298
BsaJI CCNNGG 1 cut(s) 220
BsaWI WCCGGW 1 cut(s) 602
Bsc4I CCNNNNNNNGG 3 cut(s) 145, 445, 609
Bse118I RCCGGY 3 cut(s) 399, 812, 824
Bse1I ACTGG 1 cut(s) 666
BseAI TCCGGA 1 cut(s) 602
BseBI CCWGG 1 cut(s) 610
BseDI CCNNGG 1 cut(s) 220
BseGI GGATG 1 cut(s) 455
BseLI CCNNNNNNNGG 3 cut(s) 145, 445, 609
BseMII CTCAG 1 cut(s) 831
BseNI ACTGG 1 cut(s) 666
BseXI GCAGC 1 cut(s) 703
BseYI CCCAGC 2 cut(s) 190, 677
Bsh1285I CGRYCG 1 cut(s) 813
BshFI GGCC 5 cut(s) 219, 613, 704, 744, 828
BshNI GGYRCC 1 cut(s) 821
BsiEI CGRYCG 1 cut(s) 813
BsiHKAI GWGCWC 1 cut(s) 114
BsiSI CCGG 5 cut(s) 400, 603, 745, 813, 825
BslI CCNNNNNNNGG 3 cut(s) 145, 445, 609
BsmAI GTCTC 2 cut(s) 298, 377
BsnI GGCC 5 cut(s) 219, 613, 704, 744, 828
Bso31I GGTCTC 1 cut(s) 298
Bsp1286I GDGCHC 1 cut(s) 114
Bsp13I TCCGGA 1 cut(s) 602
Bsp143I GATC 7 cut(s) 19, 248, 260, 655, 685, 783, 835
BspACI CCGC 5 cut(s) 695, 698, 705, 708, 763
BspANI GGCC 5 cut(s) 219, 613, 704, 744, 828
BspCNI CTCAG 1 cut(s) 830
BspEI TCCGGA 1 cut(s) 602
BspHI TCATGA 1 cut(s) 379
BspLI GGNNCC 5 cut(s) 102, 607, 666, 675, 823
BspMI ACCTGC 1 cut(s) 233
BspPI GGATC 4 cut(s) 14, 256, 663, 843
BspT107I GGYRCC 1 cut(s) 821
BspTI CTTAAG 1 cut(s) 34
BspTNI GGTCTC 1 cut(s) 298
BsrFI RCCGGY 3 cut(s) 399, 812, 824
BsrI ACTGG 1 cut(s) 666
BssAI RCCGGY 3 cut(s) 399, 812, 824
BssECI CCNNGG 1 cut(s) 220
BssMI GATC 7 cut(s) 19, 248, 260, 655, 685, 783, 835
BssNI GRCGYC 1 cut(s) 822
BssT1I CCWWGG 1 cut(s) 220
Bst2UI CCWGG 1 cut(s) 610
Bst4CI ACNGT 3 cut(s) 47, 376, 536
Bst6I CTCTTC 1 cut(s) 789
BstACI GRCGYC 1 cut(s) 822
BstAFI CTTAAG 1 cut(s) 34
BstBAI YACGTR 3 cut(s) 257, 311, 832
BstC8I GCNNGC 3 cut(s) 228, 401, 826
BstDEI CTNAG 3 cut(s) 200, 387, 817
BstF5I GGATG 1 cut(s) 455
BstH2I RGCGCY 1 cut(s) 825
BstHHI GCGC 2 cut(s) 300, 824
BstKTI GATC 7 cut(s) 22, 251, 263, 658, 688, 786, 838
BstMAI GTCTC 2 cut(s) 298, 377
BstMBI GATC 7 cut(s) 19, 248, 260, 655, 685, 783, 835
BstMCI CGRYCG 1 cut(s) 813
BstMWI GCNNNNNNNGC 6 cut(s) 118, 701, 704, 713, 716, 806
BstNI CCWGG 1 cut(s) 610
BstNSI RCATGY 2 cut(s) 296, 739
BstSCI CCNGG 1 cut(s) 608
BstSNI TACGTA 1 cut(s) 257
BstV1I GCAGC 1 cut(s) 703
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 2 cut(s) 248, 655
BstYI RGATCY 2 cut(s) 248, 655
BsuRI GGCC 5 cut(s) 219, 613, 704, 744, 828
BtsCI GGATG 1 cut(s) 455
BtsI GCAGTG 1 cut(s) 507
BtsIMutI CAGTG 4 cut(s) 52, 507, 541, 561
BveI ACCTGC 1 cut(s) 233
Cac8I GCNNGC 3 cut(s) 228, 401, 826
CciI TCATGA 1 cut(s) 379
CfoI GCGC 2 cut(s) 300, 824
Cfr10I RCCGGY 3 cut(s) 399, 812, 824
Cfr13I GGNCC 1 cut(s) 630
CseI GACGC 1 cut(s) 741
Csp6I GTAC 3 cut(s) 176, 254, 730
CspCI CAANNNNNGTGG 2 cut(s) 453, 488
CviAII CATG 6 cut(s) 6, 107, 293, 380, 482, 736
CviQI GTAC 3 cut(s) 176, 254, 730
DdeI CTNAG 3 cut(s) 200, 387, 817
DinI GGCGCC 1 cut(s) 823
DpnI GATC 7 cut(s) 21, 250, 262, 657, 687, 785, 837
DpnII GATC 7 cut(s) 19, 248, 260, 655, 685, 783, 835
EaeI YGGCCR 4 cut(s) 217, 702, 742, 826
Eam1104I CTCTTC 1 cut(s) 789
EarI CTCTTC 1 cut(s) 789
Ecl136II GAGCTC 1 cut(s) 112
Eco105I TACGTA 1 cut(s) 257
Eco130I CCWWGG 1 cut(s) 220
Eco24I GRGCYC 1 cut(s) 114
Eco31I GGTCTC 1 cut(s) 298
Eco47I GGWCC 1 cut(s) 630
Eco53kI GAGCTC 1 cut(s) 112
Eco72I CACGTG 1 cut(s) 832
EcoICRI GAGCTC 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 550
EcoRII CCWGG 1 cut(s) 608
EcoT14I CCWWGG 1 cut(s) 220
EcoT38I GRGCYC 1 cut(s) 114
EgeI GGCGCC 1 cut(s) 823
EheI GGCGCC 1 cut(s) 823
ErhI CCWWGG 1 cut(s) 220
FaeI CATG 6 cut(s) 9, 110, 296, 383, 485, 739
FatI CATG 6 cut(s) 5, 106, 292, 379, 481, 735
FauNDI CATATG 1 cut(s) 469
Fnu4HI GCNGC 4 cut(s) 696, 705, 708, 717
FokI GGATG 1 cut(s) 462
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 4 cut(s) 696, 705, 708, 717
FspBI CTAG 3 cut(s) 24, 588, 641
FspI TGCGCA 1 cut(s) 299
GlaI GCGC 2 cut(s) 299, 823
GluI GCNGC 4 cut(s) 696, 705, 708, 717
GsaI CCCAGC 2 cut(s) 194, 681
GsuI CTGGAG 1 cut(s) 562
HaeII RGCGCY 1 cut(s) 825
HaeIII GGCC 5 cut(s) 219, 613, 704, 744, 828
HapII CCGG 5 cut(s) 400, 603, 745, 813, 825
HgaI GACGC 1 cut(s) 741
HhaI GCGC 2 cut(s) 300, 824
Hin1I GRCGYC 1 cut(s) 822
Hin1II CATG 6 cut(s) 9, 110, 296, 383, 485, 739
Hin6I GCGC 2 cut(s) 298, 822
HinP1I GCGC 2 cut(s) 298, 822
HincII GTYRAC 1 cut(s) 462
HindII GTYRAC 1 cut(s) 462
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 2 cut(s) 724, 840
HpaII CCGG 5 cut(s) 400, 603, 745, 813, 825
Hpy166II GTNNAC 2 cut(s) 462, 850
Hpy188I TCNGA 2 cut(s) 690, 860
Hpy188III TCNNGA 5 cut(s) 63, 380, 394, 603, 781
Hpy8I GTNNAC 2 cut(s) 462, 850
Hpy99I CGWCG 1 cut(s) 757
HpyAV CCTTC 2 cut(s) 91, 433
HpyCH4III ACNGT 3 cut(s) 47, 376, 536
HpyCH4IV ACGT 3 cut(s) 256, 310, 831
HpyCH4V TGCA 5 cut(s) 121, 153, 230, 242, 500
HpyF10VI GCNNNNNNNGC 6 cut(s) 118, 701, 704, 713, 716, 806
HpyF3I CTNAG 3 cut(s) 200, 387, 817
HpySE526I ACGT 3 cut(s) 256, 310, 831
Hsp92I GRCGYC 1 cut(s) 822
Hsp92II CATG 6 cut(s) 9, 110, 296, 383, 485, 739
HspAI GCGC 2 cut(s) 298, 822
KasI GGCGCC 1 cut(s) 821
Kpn2I TCCGGA 1 cut(s) 602
KroI GCCGGC 2 cut(s) 399, 824
KroNI GCCGGC 2 cut(s) 401, 826
Kzo9I GATC 7 cut(s) 19, 248, 260, 655, 685, 783, 835
LmnI GCTCC 1 cut(s) 605
Lsp1109I GCAGC 1 cut(s) 703
LweI GCATC 2 cut(s) 406, 487
MaeI CTAG 3 cut(s) 24, 588, 641
MaeII ACGT 3 cut(s) 256, 310, 831
MaeIII GTNAC 3 cut(s) 76, 311, 370
MalI GATC 7 cut(s) 21, 250, 262, 657, 687, 785, 837
MboI GATC 7 cut(s) 19, 248, 260, 655, 685, 783, 835
MboII GAAGA 5 cut(s) 353, 427, 556, 559, 806
MflI RGATCY 2 cut(s) 248, 655
MhlI GDGCHC 1 cut(s) 114
MlsI TGGCCA 1 cut(s) 219
MluCI AATT 4 cut(s) 88, 237, 323, 550
MluNI TGGCCA 1 cut(s) 219
Mly113I GGCGCC 1 cut(s) 822
MlyI GAGTC 1 cut(s) 849
MmeI TCCRAC 2 cut(s) 387, 633
MnlI CCTC 9 cut(s) 169, 331, 430, 505, 523, 586, 610, 784, 790
Mox20I TGGCCA 1 cut(s) 219
MroI TCCGGA 1 cut(s) 602
MroNI GCCGGC 2 cut(s) 399, 824
MscI TGGCCA 1 cut(s) 219
MseI TTAA 3 cut(s) 35, 87, 281
MslI CAYNNNNRTG 2 cut(s) 126, 448
Msp20I TGGCCA 1 cut(s) 219
MspCI CTTAAG 1 cut(s) 34
MspI CCGG 5 cut(s) 400, 603, 745, 813, 825
MspR9I CCNGG 1 cut(s) 610
MvaI CCWGG 1 cut(s) 610
MwoI GCNNNNNNNGC 6 cut(s) 118, 701, 704, 713, 716, 806
NaeI GCCGGC 2 cut(s) 401, 826
NarI GGCGCC 1 cut(s) 822
NdeI CATATG 1 cut(s) 469
NdeII GATC 7 cut(s) 19, 248, 260, 655, 685, 783, 835
NgoMIV GCCGGC 2 cut(s) 399, 824
NlaIII CATG 6 cut(s) 9, 110, 296, 383, 485, 739
NlaIV GGNNCC 5 cut(s) 102, 607, 666, 675, 823
NmuCI GTSAC 1 cut(s) 76
NsbI TGCGCA 1 cut(s) 299
NspI RCATGY 2 cut(s) 296, 739
PagI TCATGA 1 cut(s) 379
PaqCI CACCTGC 1 cut(s) 233
PciI ACATGT 2 cut(s) 292, 735
PcsI WCGNNNNNNNCGW 1 cut(s) 786
PdiI GCCGGC 2 cut(s) 401, 826
PfeI GAWTC 1 cut(s) 724
PkrI GCNGC 4 cut(s) 697, 706, 709, 718
PleI GAGTC 1 cut(s) 848
PluTI GGCGCC 1 cut(s) 825
PmaCI CACGTG 1 cut(s) 832
PmlI CACGTG 1 cut(s) 832
PpsI GAGTC 1 cut(s) 848
Ppu21I YACGTR 3 cut(s) 257, 311, 832
PscI ACATGT 2 cut(s) 292, 735
PsiI TTATAA 1 cut(s) 236
Psp124BI GAGCTC 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 608
PspCI CACGTG 1 cut(s) 832
PspFI CCCAGC 2 cut(s) 190, 677
PspGI CCWGG 1 cut(s) 608
PspN4I GGNNCC 5 cut(s) 102, 607, 666, 675, 823
PspPI GGNCC 1 cut(s) 630
PsuI RGATCY 2 cut(s) 248, 655
RsaI GTAC 3 cut(s) 177, 255, 731
RsaNI GTAC 3 cut(s) 176, 254, 730
RseI CAYNNNNRTG 2 cut(s) 126, 448
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 3 cut(s) 35, 87, 281
SatI GCNGC 4 cut(s) 696, 705, 708, 717
Sau3AI GATC 7 cut(s) 19, 248, 260, 655, 685, 783, 835
Sau96I GGNCC 1 cut(s) 630
SchI GAGTC 1 cut(s) 849
ScrFI CCNGG 1 cut(s) 610
SduI GDGCHC 1 cut(s) 114
SfaNI GCATC 2 cut(s) 406, 487
SfoI GGCGCC 1 cut(s) 823
SinI GGWCC 1 cut(s) 630
SmiMI CAYNNNNRTG 2 cut(s) 126, 448
SmlI CTYRAG 3 cut(s) 34, 392, 622
SmoI CTYRAG 3 cut(s) 34, 392, 622
SnaBI TACGTA 1 cut(s) 257
Sse9I AATT 4 cut(s) 88, 237, 323, 550
SsiI CCGC 5 cut(s) 695, 698, 705, 708, 763
SspDI GGCGCC 1 cut(s) 821
SspI AATATT 1 cut(s) 169
SspMI CTAG 3 cut(s) 24, 588, 641
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 1 cut(s) 608
StyI CCWWGG 1 cut(s) 220
TaaI ACNGT 3 cut(s) 47, 376, 536
TaiI ACGT 3 cut(s) 259, 313, 834
TaqI TCGA 3 cut(s) 684, 780, 838
TasI AATT 4 cut(s) 88, 237, 323, 550
TatI WGTACW 2 cut(s) 175, 729
TauI GCSGC 3 cut(s) 698, 707, 710
TfiI GAWTC 1 cut(s) 724
Tru1I TTAA 3 cut(s) 35, 87, 281
Tru9I TTAA 3 cut(s) 35, 87, 281
TscAI CASTG 4 cut(s) 52, 507, 541, 561
TseFI GTSAC 1 cut(s) 76
TseI GCWGC 1 cut(s) 716
Tsp45I GTSAC 1 cut(s) 76
TspDTI ATGAA 1 cut(s) 368
TspGWI ACGGA 1 cut(s) 128
TspRI CASTG 4 cut(s) 52, 507, 541, 561
Vha464I CTTAAG 1 cut(s) 34
VpaK11BI GGWCC 1 cut(s) 630
XapI RAATTY 1 cut(s) 550
XceI RCATGY 2 cut(s) 296, 739
XcmI CCANNNNNNNNNTGG 1 cut(s) 580
XspI CTAG 3 cut(s) 24, 588, 641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.