Rh2CG202400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
19662979 .. 19663221
243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG202400.1

Sequence Viewer

Length: 243 bp
ATGCCCACGACACCGGCTTTCTCTCTCTCCCCGTTGCCACCTGGCTCTGCACCAACGGCGAAAGCAGCTTCCGGTCAATGTCGCTCACCTCTATCCAACATCTCCTGCCCTGGCTCCACCATGCCTTCGCCTCTCCAGTCAAAGCTGAATCCCAATCCCAAGAATTCGTATAGCCAAGCCGGCGATGAGGATTGGGGAAATAGTGTAGAAGAGGAAGTAGTTGAGGAGGAGAAAGACGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

80

Amino Acids

8.38

Weight (kDa)

4.38

Isoelectric Point (pI)

92.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 163
AjnI CCWGG 2 cut(s) 40, 109
AluBI AGCT 2 cut(s) 68, 145
AluI AGCT 2 cut(s) 68, 145
ApeKI GCWGC 1 cut(s) 65
ApoI RAATTY 1 cut(s) 163
AsuHPI GGTGA 1 cut(s) 78
BbvI GCAGC 1 cut(s) 77
BceAI ACGGC 1 cut(s) 72
BciT130I CCWGG 2 cut(s) 42, 111
BglI GCCNNNNNGGC 1 cut(s) 180
BisI GCNGC 1 cut(s) 66
BlsI GCNGC 1 cut(s) 67
Bme1390I CCNGG 2 cut(s) 42, 111
BmiI GGNNCC 1 cut(s) 115
BmrFI CCNGG 2 cut(s) 42, 111
BpmI CTGGAG 1 cut(s) 119
BsaJI CCNNGG 1 cut(s) 109
BsaWI WCCGGW 1 cut(s) 71
Bse118I RCCGGY 2 cut(s) 13, 179
Bse1I ACTGG 1 cut(s) 136
BseBI CCWGG 2 cut(s) 42, 111
BseDI CCNNGG 1 cut(s) 109
BseNI ACTGG 1 cut(s) 136
BseRI GAGGAG 2 cut(s) 239, 242
BseXI GCAGC 1 cut(s) 77
BsgI GTGCAG 1 cut(s) 33
BsiSI CCGG 3 cut(s) 14, 72, 180
BspLI GGNNCC 1 cut(s) 115
BsrFI RCCGGY 2 cut(s) 13, 179
BsrI ACTGG 1 cut(s) 136
BssAI RCCGGY 2 cut(s) 13, 179
BssECI CCNNGG 1 cut(s) 109
Bst2UI CCWGG 2 cut(s) 42, 111
Bst6I CTCTTC 1 cut(s) 204
BstC8I GCNNGC 1 cut(s) 181
BstMWI GCNNNNNNNGC 3 cut(s) 56, 65, 180
BstNI CCWGG 2 cut(s) 42, 111
BstSCI CCNGG 2 cut(s) 40, 109
BstV1I GCAGC 1 cut(s) 77
BtgZI GCGATG 1 cut(s) 198
Cac8I GCNNGC 1 cut(s) 181
Cfr10I RCCGGY 2 cut(s) 13, 179
CviAII CATG 1 cut(s) 121
CviJI RGCY 7 cut(s) 17, 45, 68, 114, 145, 174, 179
CviKI_1 RGCY 7 cut(s) 17, 45, 68, 114, 145, 174, 179
Eam1104I CTCTTC 1 cut(s) 204
EarI CTCTTC 1 cut(s) 204
EcoRI GAATTC 1 cut(s) 163
EcoRII CCWGG 2 cut(s) 40, 109
FaeI CATG 1 cut(s) 124
FaiI YATR 2 cut(s) 122, 171
FatI CATG 1 cut(s) 120
Fnu4HI GCNGC 1 cut(s) 66
Fsp4HI GCNGC 1 cut(s) 66
GluI GCNGC 1 cut(s) 66
GsuI CTGGAG 1 cut(s) 119
HapII CCGG 3 cut(s) 14, 72, 180
Hin1II CATG 1 cut(s) 124
HinfI GANTC 1 cut(s) 148
HpaII CCGG 3 cut(s) 14, 72, 180
HphI GGTGA 1 cut(s) 78
HpyAV CCTTC 1 cut(s) 135
HpyCH4V TGCA 1 cut(s) 50
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 65, 180
Hsp92II CATG 1 cut(s) 124
KroI GCCGGC 1 cut(s) 179
KroNI GCCGGC 1 cut(s) 181
LmnI GCTCC 1 cut(s) 119
LpnPI CCDG 9 cut(s) 27, 27, 54, 85, 96, 118, 123, 149, 193
Lsp1109I GCAGC 1 cut(s) 77
MboII GAAGA 1 cut(s) 221
MluCI AATT 1 cut(s) 163
MmeI TCCRAC 1 cut(s) 120
MnlI CCTC 6 cut(s) 99, 141, 181, 205, 217, 220
MroNI GCCGGC 1 cut(s) 179
MspI CCGG 3 cut(s) 14, 72, 180
MspR9I CCNGG 2 cut(s) 42, 111
MvaI CCWGG 2 cut(s) 42, 111
MwoI GCNNNNNNNGC 3 cut(s) 56, 65, 180
NaeI GCCGGC 1 cut(s) 181
NgoMIV GCCGGC 1 cut(s) 179
NlaIII CATG 1 cut(s) 124
NlaIV GGNNCC 1 cut(s) 115
PdiI GCCGGC 1 cut(s) 181
PfeI GAWTC 1 cut(s) 148
PkrI GCNGC 1 cut(s) 67
Psp6I CCWGG 2 cut(s) 40, 109
PspGI CCWGG 2 cut(s) 40, 109
PspN4I GGNNCC 1 cut(s) 115
SatI GCNGC 1 cut(s) 66
ScrFI CCNGG 2 cut(s) 42, 111
SetI ASST 4 cut(s) 43, 70, 91, 147
Sse9I AATT 1 cut(s) 163
StyD4I CCNGG 2 cut(s) 40, 109
TasI AATT 1 cut(s) 163
TfiI GAWTC 1 cut(s) 148
TseI GCWGC 1 cut(s) 65
XapI RAATTY 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.