Rh4CG263200

Encoded by

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
51804490 .. 51809446
4957 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG263200.1

Sequence Viewer

Length: 1422 bp
ATGTTGCAGCTTCTGAAGCCTGCGTTCACCATTCTACGTGATAAAGATTCAAAATGCTTTCTTCTGTTGATACGTGGTACACATAGTATCAAAGATACACTAACTGCCGCAACTGGTGCAGTGGCCCCTTTCCACCATTCGGTTTTGCATGATGGTGGAATAAGCAACTTAGTCCTAGGATATGCTCACTGCGGGATGGTTGCTGCAGCCCGTTGGATTGCTAAGCTCAGTACTCCTTGCTTGCTTAAGGCTCTTGGTGAATATCCTGAGTATACAGTAAAGGTTGTTGGACATTCACTGGGGGGCGGTACAGCTGCTTTATTAACATACATTCTCCGGGAACGGAGAGAATTATCTTCAAGTACTTGCATTACATTTGCCCCAGCTGCCTGTATAACAATGGAGTTGGCAGAATCTGGCAAGCACTTCATCACTACTATCATCAATGGCTCTGACCTGGTGCCTACATTCTCAGCAGCTTCTGTTGATGACCTCCGCTCTGAGGTCACAGCTTCATCTTGGTTAAATGATTTGCGGGATCAGGTTGAGCATACACGTGTTTTGAATGTTGTTTATCGTTCAGCAACTGCTCTGGGTTCTCGTCTACCATCTATAGCTAGTGCAAAAGCCAGGGTTGCTGGTGCAGGTGCACTATTGAGGCCAGTATCCAGCAGTACTCAGGTTGTGATGAAGCGTGCACAAAATGTTGCCCTAGCTGTTGTTAGAACCCGTTCATCTATATCATCTTGGTCTTGCATGGGTGCACGTCGCCGTAATGTGGGTCAATCATTGAACTCTACCATGGGTGATTCACATGAAACTTCTGTAATATGTGAAAGGGATTCTGAATCTCTGGCTGAAGGAACAACCGCTGACCCAATGCTGGATAATTTGGTGTGTAGTTCTGGTGGCTCAGGTCATGATGATACTGATGAAGAGGAGCAGCTTTTGCCAGTGCATGAAGATCCAACCACATCTGCTGTCGAAGACATTACTGAAGGTGAATTGTGGTATGAACTGGAGAAGGAGCTTACGAGGCAGGAGAATGAAATCAATGTTCAGGCTAAGGAGGAAGAAGCTGCTGCAGTTAAAGAAATAACCGAGGAAGAAAATATGCTGGTTGATGTTGCAGAAAGCAATACGCCAATCTCTTCCGCAGACATTTCTGAGAGCCACCGGTTCTATCCCCCTGGCAGAATCATGCACATTATATCAGTAACCTCGTCTGATTCTGCCGATTTAGACCATGATGGACCGAGTGAAGAGCATGTTGGTATATACGAGACACGTAGAGAACTGTACAGTAAGCTCCGACTTTCTAGAACGATGATCAACGATCACTATATGCCTATGTATAAGAAAATGATGGAATTGTTGATTAGAGAACTGGAAAATGAAGAAGCAAATAGTTCTGTTATGTAA

Protein Analysis

473

Amino Acids

51.68

Weight (kDa)

5.14

Isoelectric Point (pI)

52.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 22 - 159 7.9e-27 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 635
Acc36I ACCTGC 1 cut(s) 635
AccB1I GGYRCC 1 cut(s) 460
AccBSI CCGCTC 1 cut(s) 498
AccI GTMKAC 2 cut(s) 272, 604
AciI CCGC 7 cut(s) 108, 192, 306, 496, 535, 870, 1155
AclWI GGATC 2 cut(s) 546, 959
AcuI CTGAAG 3 cut(s) 35, 879, 1017
AcvI CACGTG 1 cut(s) 557
AfaI GTAC 6 cut(s) 79, 232, 310, 364, 676, 1301
AfiI CCNNNNNNNGG 4 cut(s) 139, 502, 778, 883
AflII CTTAAG 1 cut(s) 245
AflIII ACRYGT 3 cut(s) 554, 556, 1286
AgeI ACCGGT 1 cut(s) 1176
AgsI TTSAA 4 cut(s) 51, 360, 565, 793
AjiI CACGTC 1 cut(s) 767
AjnI CCWGG 3 cut(s) 456, 629, 1189
AjuI GAANNNNNNNTTGG 2 cut(s) 1254, 1286
Alw21I GWGCWC 3 cut(s) 652, 700, 766
Alw26I GTCTC 1 cut(s) 1277
Alw44I GTGCAC 3 cut(s) 648, 696, 762
AlwI GGATC 2 cut(s) 546, 959
AlwNI CAGNNNCTG 4 cut(s) 13, 416, 482, 587
AoxI GGCC 2 cut(s) 123, 659
ApaLI GTGCAC 3 cut(s) 648, 696, 762
ApeKI GCWGC 9 cut(s) 7, 203, 206, 314, 386, 476, 943, 1079, 1082
AsiGI ACCGGT 1 cut(s) 1176
Asp700I GAANNNNTTC 1 cut(s) 730
AspA2I CCTAGG 1 cut(s) 175
AspS9I GGNCC 2 cut(s) 124, 1253
AsuC2I CCSGG 1 cut(s) 338
AsuHPI GGTGA 4 cut(s) 19, 269, 818, 1013
AvaII GGWCC 1 cut(s) 1253
AvrII CCTAGG 1 cut(s) 175
BaeGI GKGCMC 3 cut(s) 652, 700, 766
BanI GGYRCC 1 cut(s) 460
BbrPI CACGTG 1 cut(s) 557
BbsI GAAGAC 1 cut(s) 993
Bbv12I GWGCWC 3 cut(s) 652, 700, 766
BbvI GCAGC 9 cut(s) 19, 190, 218, 301, 373, 488, 955, 1066, 1069
BccI CCATC 5 cut(s) 146, 190, 616, 1244, 1360
BceAI ACGGC 1 cut(s) 756
BciT130I CCWGG 3 cut(s) 458, 631, 1191
BciVI GTATCC 1 cut(s) 676
BclI TGATCA 1 cut(s) 1329
BcnI CCSGG 1 cut(s) 338
BcoDI GTCTC 1 cut(s) 1277
BfaI CTAG 4 cut(s) 176, 618, 713, 1320
BfmI CTRYAG 3 cut(s) 204, 612, 1083
BfrI CTTAAG 1 cut(s) 245
BfuAI ACCTGC 1 cut(s) 635
BfuI GTATCC 1 cut(s) 676
BlnI CCTAGG 1 cut(s) 175
BlpI GCTNAGC 1 cut(s) 222
BmcAI AGTACT 3 cut(s) 232, 364, 676
Bme1390I CCNGG 4 cut(s) 338, 458, 631, 1191
Bme18I GGWCC 1 cut(s) 1253
BmgBI CACGTC 1 cut(s) 767
BmgT120I GGNCC 2 cut(s) 124, 1253
BmiI GGNNCC 2 cut(s) 126, 462
BmrFI CCNGG 4 cut(s) 338, 458, 631, 1191
BmrI ACTGGG 1 cut(s) 308
BmuI ACTGGG 1 cut(s) 308
BpiI GAAGAC 1 cut(s) 993
BpmI CTGGAG 1 cut(s) 1040
Bpu10I CCTNAGC 2 cut(s) 913, 1065
Bpu1102I GCTNAGC 1 cut(s) 222
BpuMI CCSGG 1 cut(s) 338
BsaAI YACGTR 4 cut(s) 38, 74, 557, 1289
BsaJI CCNNGG 5 cut(s) 175, 630, 801, 1101, 1189
BsaWI WCCGGW 1 cut(s) 1176
Bsc4I CCNNNNNNNGG 4 cut(s) 139, 502, 778, 883
Bse118I RCCGGY 1 cut(s) 1176
Bse1I ACTGG 6 cut(s) 118, 303, 662, 953, 1023, 1392
BseBI CCWGG 3 cut(s) 458, 631, 1191
BseDI CCNNGG 5 cut(s) 175, 630, 801, 1101, 1189
BseGI GGATG 1 cut(s) 201
BseLI CCNNNNNNNGG 4 cut(s) 139, 502, 778, 883
BseMII CTCAG 7 cut(s) 241, 258, 486, 492, 692, 927, 1158
BseNI ACTGG 6 cut(s) 118, 303, 662, 953, 1023, 1392
BseRI GAGGAG 1 cut(s) 953
BseSI GKGCMC 3 cut(s) 652, 700, 766
BseXI GCAGC 9 cut(s) 19, 190, 218, 301, 373, 488, 955, 1066, 1069
BseYI CCCAGC 1 cut(s) 382
BsgI GTGCAG 2 cut(s) 138, 663
BshFI GGCC 2 cut(s) 125, 661
BshNI GGYRCC 1 cut(s) 460
BshTI ACCGGT 1 cut(s) 1176
BsiHKAI GWGCWC 3 cut(s) 652, 700, 766
BsiSI CCGG 2 cut(s) 337, 1177
BslI CCNNNNNNNGG 4 cut(s) 139, 502, 778, 883
BsmAI GTCTC 1 cut(s) 1277
BsnI GGCC 2 cut(s) 125, 661
Bsp1286I GDGCHC 3 cut(s) 652, 700, 766
Bsp1407I TGTACA 1 cut(s) 1299
Bsp143I GATC 4 cut(s) 538, 964, 1329, 1336
Bsp1720I GCTNAGC 1 cut(s) 222
Bsp19I CCATGG 1 cut(s) 801
BspACI CCGC 7 cut(s) 108, 192, 306, 496, 535, 870, 1155
BspANI GGCC 2 cut(s) 125, 661
BspCNI CTCAG 7 cut(s) 240, 259, 485, 493, 691, 926, 1159
BspHI TCATGA 1 cut(s) 919
BspLI GGNNCC 2 cut(s) 126, 462
BspMAI CTGCAG 2 cut(s) 208, 1087
BspMI ACCTGC 1 cut(s) 635
BspPI GGATC 2 cut(s) 546, 959
BspQI GCTCTTC 1 cut(s) 1257
BspT107I GGYRCC 1 cut(s) 460
BspTI CTTAAG 1 cut(s) 245
BsrBI CCGCTC 1 cut(s) 498
BsrFI RCCGGY 1 cut(s) 1176
BsrGI TGTACA 1 cut(s) 1299
BsrI ACTGG 6 cut(s) 118, 303, 662, 953, 1023, 1392
BssAI RCCGGY 1 cut(s) 1176
BssECI CCNNGG 5 cut(s) 175, 630, 801, 1101, 1189
BssMI GATC 4 cut(s) 538, 964, 1329, 1336
BssNAI GTATAC 1 cut(s) 273
BssT1I CCWWGG 2 cut(s) 175, 801
Bst1107I GTATAC 1 cut(s) 273
Bst2UI CCWGG 3 cut(s) 458, 631, 1191
Bst4CI ACNGT 3 cut(s) 277, 1299, 1304
Bst6I CTCTTC 3 cut(s) 930, 1156, 1257
BstAFI CTTAAG 1 cut(s) 245
BstAPI GCANNNNNTGC 2 cut(s) 116, 949
BstAUI TGTACA 1 cut(s) 1299
BstBAI YACGTR 4 cut(s) 38, 74, 557, 1289
BstC8I GCNNGC 4 cut(s) 21, 242, 422, 696
BstDSI CCRYGG 1 cut(s) 801
BstF5I GGATG 1 cut(s) 201
BstKTI GATC 4 cut(s) 541, 967, 1332, 1339
BstMAI GTCTC 1 cut(s) 1277
BstMBI GATC 4 cut(s) 538, 964, 1329, 1336
BstMWI GCNNNNNNNGC 6 cut(s) 16, 116, 386, 635, 949, 1036
BstNI CCWGG 3 cut(s) 458, 631, 1191
BstNSI RCATGY 1 cut(s) 1271
BstSCI CCNGG 4 cut(s) 336, 456, 629, 1189
BstSFI CTRYAG 3 cut(s) 204, 612, 1083
BstSLI GKGCMC 3 cut(s) 652, 700, 766
BstV1I GCAGC 9 cut(s) 19, 190, 218, 301, 373, 488, 955, 1066, 1069
BstV2I GAAGAC 1 cut(s) 993
BstX2I RGATCY 1 cut(s) 964
BstYI RGATCY 1 cut(s) 964
BstZ17I GTATAC 1 cut(s) 273
BsuI GTATCC 1 cut(s) 676
BsuRI GGCC 2 cut(s) 125, 661
BtgI CCRYGG 1 cut(s) 801
BtrI CACGTC 1 cut(s) 767
BtsCI GGATG 1 cut(s) 201
BtsI GCAGTG 2 cut(s) 126, 187
BtsIMutI CAGTG 4 cut(s) 126, 187, 296, 960
BveI ACCTGC 1 cut(s) 635
Cac8I GCNNGC 4 cut(s) 21, 242, 422, 696
CaiI CAGNNNCTG 4 cut(s) 13, 416, 482, 587
CciI TCATGA 1 cut(s) 919
Cfr10I RCCGGY 1 cut(s) 1176
Cfr13I GGNCC 2 cut(s) 124, 1253
CsiI ACCWGGT 1 cut(s) 456
Csp6I GTAC 6 cut(s) 78, 231, 309, 363, 675, 1300
CspAI ACCGGT 1 cut(s) 1176
CviAII CATG 9 cut(s) 149, 757, 802, 815, 920, 959, 1201, 1247, 1268
CviQI GTAC 6 cut(s) 78, 231, 309, 363, 675, 1300
DpnI GATC 4 cut(s) 540, 966, 1331, 1338
DpnII GATC 4 cut(s) 538, 964, 1329, 1336
Eam1104I CTCTTC 3 cut(s) 930, 1156, 1257
EarI CTCTTC 3 cut(s) 930, 1156, 1257
Eco130I CCWWGG 2 cut(s) 175, 801
Eco47I GGWCC 1 cut(s) 1253
Eco57I CTGAAG 3 cut(s) 35, 879, 1017
Eco72I CACGTG 1 cut(s) 557
EcoRII CCWGG 3 cut(s) 456, 629, 1189
EcoT14I CCWWGG 2 cut(s) 175, 801
ErhI CCWWGG 2 cut(s) 175, 801
FaeI CATG 9 cut(s) 152, 760, 805, 818, 923, 962, 1204, 1250, 1271
FatI CATG 9 cut(s) 148, 756, 801, 814, 919, 958, 1200, 1246, 1267
FauI CCCGC 2 cut(s) 185, 528
FbaI TGATCA 1 cut(s) 1329
FblI GTMKAC 2 cut(s) 272, 604
FokI GGATG 1 cut(s) 208
FspBI CTAG 4 cut(s) 176, 618, 713, 1320
GsaI CCCAGC 1 cut(s) 386
GsuI CTGGAG 1 cut(s) 1040
HaeIII GGCC 2 cut(s) 125, 661
HapII CCGG 2 cut(s) 337, 1177
Hin1II CATG 9 cut(s) 152, 760, 805, 818, 923, 962, 1204, 1250, 1271
HinfI GANTC 7 cut(s) 47, 413, 809, 842, 848, 1197, 1229
HpaII CCGG 2 cut(s) 337, 1177
HphI GGTGA 4 cut(s) 19, 269, 818, 1013
Hpy166II GTNNAC 7 cut(s) 27, 80, 273, 605, 650, 698, 764
Hpy188I TCNGA 7 cut(s) 15, 454, 502, 847, 1168, 1228, 1313
Hpy188III TCNNGA 3 cut(s) 266, 920, 1320
Hpy8I GTNNAC 7 cut(s) 27, 80, 273, 605, 650, 698, 764
Hpy99I CGWCG 1 cut(s) 771
HpyAV CCTTC 3 cut(s) 854, 992, 1018
HpyCH4III ACNGT 3 cut(s) 277, 1299, 1304
HpyCH4IV ACGT 5 cut(s) 37, 73, 556, 766, 1288
HpyF10VI GCNNNNNNNGC 6 cut(s) 16, 116, 386, 635, 949, 1036
HpySE526I ACGT 5 cut(s) 37, 73, 556, 766, 1288
Hsp92II CATG 9 cut(s) 152, 760, 805, 818, 923, 962, 1204, 1250, 1271
Ksp22I TGATCA 1 cut(s) 1329
Kzo9I GATC 4 cut(s) 538, 964, 1329, 1336
LguI GCTCTTC 1 cut(s) 1257
LmnI GCTCC 3 cut(s) 940, 1027, 1314
Lsp1109I GCAGC 9 cut(s) 19, 190, 218, 301, 373, 488, 955, 1066, 1069
MabI ACCWGGT 1 cut(s) 456
MaeI CTAG 4 cut(s) 176, 618, 713, 1320
MaeII ACGT 5 cut(s) 37, 73, 556, 766, 1288
MaeIII GTNAC 2 cut(s) 505, 1216
MalI GATC 4 cut(s) 540, 966, 1331, 1338
MbiI CCGCTC 1 cut(s) 498
MboI GATC 4 cut(s) 538, 964, 1329, 1336
MflI RGATCY 1 cut(s) 964
MhlI GDGCHC 3 cut(s) 652, 700, 766
MluCI AATT 4 cut(s) 350, 889, 1004, 1370
MmeI TCCRAC 4 cut(s) 194, 268, 992, 1336
MnlI CCTC 8 cut(s) 496, 503, 651, 931, 1029, 1063, 1096, 1231
MroXI GAANNNNTTC 1 cut(s) 730
MseI TTAA 4 cut(s) 246, 323, 524, 1089
MslI CAYNNNNRTG 2 cut(s) 153, 555
MspA1I CMGCKG 3 cut(s) 314, 386, 872
MspCI CTTAAG 1 cut(s) 245
MspI CCGG 2 cut(s) 337, 1177
MspR9I CCNGG 4 cut(s) 338, 458, 631, 1191
MvaI CCWGG 3 cut(s) 458, 631, 1191
MwoI GCNNNNNNNGC 6 cut(s) 16, 116, 386, 635, 949, 1036
NciI CCSGG 1 cut(s) 338
NcoI CCATGG 1 cut(s) 801
NdeII GATC 4 cut(s) 538, 964, 1329, 1336
NlaIII CATG 9 cut(s) 152, 760, 805, 818, 923, 962, 1204, 1250, 1271
NlaIV GGNNCC 2 cut(s) 126, 462
NmuCI GTSAC 1 cut(s) 505
NspI RCATGY 1 cut(s) 1271
PagI TCATGA 1 cut(s) 919
PaqCI CACCTGC 1 cut(s) 635
PciSI GCTCTTC 1 cut(s) 1257
PdmI GAANNNNTTC 1 cut(s) 730
PfeI GAWTC 7 cut(s) 47, 413, 809, 842, 848, 1197, 1229
PfoI TCCNGGA 1 cut(s) 336
PinAI ACCGGT 1 cut(s) 1176
PmaCI CACGTG 1 cut(s) 557
PmlI CACGTG 1 cut(s) 557
Ppu21I YACGTR 4 cut(s) 38, 74, 557, 1289
Psp6I CCWGG 3 cut(s) 456, 629, 1189
PspCI CACGTG 1 cut(s) 557
PspFI CCCAGC 1 cut(s) 382
PspGI CCWGG 3 cut(s) 456, 629, 1189
PspN4I GGNNCC 2 cut(s) 126, 462
PspPI GGNCC 2 cut(s) 124, 1253
PstI CTGCAG 2 cut(s) 208, 1087
PstNI CAGNNNCTG 4 cut(s) 13, 416, 482, 587
PsuI RGATCY 1 cut(s) 964
PvuII CAGCTG 2 cut(s) 314, 386
RsaI GTAC 6 cut(s) 79, 232, 310, 364, 676, 1301
RsaNI GTAC 6 cut(s) 78, 231, 309, 363, 675, 1300
RseI CAYNNNNRTG 2 cut(s) 153, 555
SapI GCTCTTC 1 cut(s) 1257
SaqAI TTAA 4 cut(s) 246, 323, 524, 1089
Sau3AI GATC 4 cut(s) 538, 964, 1329, 1336
Sau96I GGNCC 2 cut(s) 124, 1253
ScaI AGTACT 3 cut(s) 232, 364, 676
ScrFI CCNGG 4 cut(s) 338, 458, 631, 1191
SduI GDGCHC 3 cut(s) 652, 700, 766
SexAI ACCWGGT 1 cut(s) 456
SfcI CTRYAG 3 cut(s) 204, 612, 1083
SinI GGWCC 1 cut(s) 1253
SmiMI CAYNNNNRTG 2 cut(s) 153, 555
SmlI CTYRAG 1 cut(s) 245
SmoI CTYRAG 1 cut(s) 245
Sse9I AATT 4 cut(s) 350, 889, 1004, 1370
SsiI CCGC 7 cut(s) 108, 192, 306, 496, 535, 870, 1155
SspMI CTAG 4 cut(s) 176, 618, 713, 1320
StyD4I CCNGG 4 cut(s) 336, 456, 629, 1189
StyI CCWWGG 2 cut(s) 175, 801
TaaI ACNGT 3 cut(s) 277, 1299, 1304
TaiI ACGT 5 cut(s) 40, 76, 559, 769, 1291
TaqI TCGA 1 cut(s) 984
TaqII GACCGA 1 cut(s) 1270
TasI AATT 4 cut(s) 350, 889, 1004, 1370
TatI WGTACW 4 cut(s) 230, 362, 674, 1299
TauI GCSGC 1 cut(s) 110
TfiI GAWTC 7 cut(s) 47, 413, 809, 842, 848, 1197, 1229
Tru1I TTAA 4 cut(s) 246, 323, 524, 1089
Tru9I TTAA 4 cut(s) 246, 323, 524, 1089
TscAI CASTG 4 cut(s) 126, 194, 303, 960
TseFI GTSAC 1 cut(s) 505
TseI GCWGC 9 cut(s) 7, 203, 206, 314, 386, 476, 943, 1079, 1082
Tsp45I GTSAC 1 cut(s) 505
TspGWI ACGGA 1 cut(s) 358
TspRI CASTG 4 cut(s) 126, 194, 303, 960
Vha464I CTTAAG 1 cut(s) 245
VneI GTGCAC 3 cut(s) 648, 696, 762
VpaK11BI GGWCC 1 cut(s) 1253
XbaI TCTAGA 1 cut(s) 1319
XceI RCATGY 1 cut(s) 1271
XmaJI CCTAGG 1 cut(s) 175
XmiI GTMKAC 2 cut(s) 272, 604
XmnI GAANNNNTTC 1 cut(s) 730
XspI CTAG 4 cut(s) 176, 618, 713, 1320
ZrmI AGTACT 3 cut(s) 232, 364, 676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.