Rh4CG092400

serine carboxypeptidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000839
Physical Location & Seq
Forward (+)
16721000 .. 16743765
22766 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG092400.1

Sequence Viewer

Length: 1458 bp
ATGGATTTTGTTCATCATTTGGTGGTACCCACAATGAAAATGATGGATTTTCTTCTACTGTTAATGTTCGCTTTCACTTTGATACTCACTTCAACTTCAGCTGCCAGCATTACTACAACCAACATTACGATCCTACCGGGTTATTCCGGTGACCTTCCTTTTGCACTGGAATCCGGATATATCGGTGTTGGTGACAATGAAGAAGTGCAGCTATTTTACGTTTTCGTTGAGTCTGAGAGAGCTCCTGCAGACGATCCTCTGTTGCTATGGTTCAATGGAGGCCCAGGTTGCTCTGGTCTTGCTGGATTCTTCTTTGAGAGTGGTCCAGTAACTTTTAAGTTTGGAAATTACAATGGGAGCCTACCAGCAGTTCTTGACAATCCATTTCGATGGACAAAGGACGTCAGCATGATATACATAGATGCACCTGTTGGTGCTGGATTCTCCTACTCAAAAACTCAAAGCGGTTATGTTATGGATGACTATAAATATGTTGCACAAAGCTATGAATTTCTGCAGAAGTGGCTGGAGGCACACCCTGCATATGTGGAAAATCTACTCTACATTAGTGGTGAATCCTTCAGTGGCTTAATAGTTCCGATGGTTGTACAAAAGATAGTAGATGGTAACGAAAATGGAAGTGTGCCTCTAATGAATATCAAGGGATATCTGCTTCAGAACCCAGTAACGGATTCAGTTATTGATGGTAATGCAGTAATCCCTTATGCCCACCGGCTGACTCTTGTATCTGATCAACTTTATAAGGCGGCTGAAACAAGTTGCAATGGTGAATACGTGAATGTAAATTCAAGCAATGCCGCATGCATTGCTGATATCGATGCTATTGATCAGCTCATCAAGGATATAAATAACAACAATATCTTGGAACCAGACTGTACTACTTCATTGCCGAGATCAAAGAAGCTAAGCACAGCTCGAAGATATCTCAAAGAGTTGTCCAAAGGTTTACTGAGTTCACCAACCAACGGTCCCGCATTTTGGTGTCGGGAGTATAATTACATGCTCCTATACATCTGGGCAAACACTAAAGCTGTCCGAGATGCTCTTGGTGTCCGAATGGGCACAAAATTGTTATGGAAACCATGTAATACCACATTGACGGGTTACACTCATGAAGTCACCAGTTCTCTCAGTTATCATCTCAATCTCACAAAAAGGTCTGACCTACGTGCTTTGATATACAGTGGTGACCATGACATGTCTGTTCCTCATATTGGTACACAAGCATGGATAAATATACTGAATTTGACTATGGATGAGTACTGGAGGACATGGTCCCTTGATGGACAAACTAAAGGATACACGAAGAAGTTAATAAATGATTTTTTCACCTTGGTATTTGCTACTGTGAAGGGAGCAGGCCACCTTGCCGCAGAGTACCAGCCAAAGGAAGTTGCTAGCTTGATTGATAGATGGATGGCTTACTACCCTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

485

Amino Acids

54.1

Weight (kDa)

5.25

Isoelectric Point (pI)

34.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 46 - 480 1.2e-112 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 762
AatII GACGTC 1 cut(s) 405
Acc65I GGTACC 1 cut(s) 25
AccB1I GGYRCC 1 cut(s) 25
AccIII TCCGGA 1 cut(s) 173
AciI CCGC 5 cut(s) 465, 767, 819, 993, 1392
AclWI GGATC 2 cut(s) 124, 248
AcsI RAATTY 3 cut(s) 509, 805, 1264
AcuI CTGAAG 3 cut(s) 81, 565, 659
AcyI GRCGYC 1 cut(s) 402
AfaI GTAC 6 cut(s) 27, 609, 898, 1240, 1283, 1400
AfiI CCNNNNNNNGG 5 cut(s) 688, 986, 999, 1235, 1408
AflIII ACRYGT 1 cut(s) 1218
AgsI TTSAA 3 cut(s) 93, 274, 810
AjnI CCWGG 1 cut(s) 283
AluBI AGCT 9 cut(s) 101, 211, 242, 504, 853, 925, 935, 1052, 1422
AluI AGCT 9 cut(s) 101, 211, 242, 504, 853, 925, 935, 1052, 1422
Alw21I GWGCWC 1 cut(s) 244
AlwI GGATC 2 cut(s) 124, 248
Aor13HI TCCGGA 1 cut(s) 173
AoxI GGCC 2 cut(s) 280, 1381
ApeKI GCWGC 2 cut(s) 101, 208
ApoI RAATTY 3 cut(s) 509, 805, 1264
ArsI GACNNNNNNTTYG 2 cut(s) 143, 175
Asp718I GGTACC 1 cut(s) 25
AspS9I GGNCC 4 cut(s) 281, 323, 989, 1296
AsuC2I CCSGG 1 cut(s) 138
AsuHPI GGTGA 8 cut(s) 161, 203, 584, 800, 969, 1132, 1220, 1342
AsuNHI GCTAGC 1 cut(s) 1418
AvaII GGWCC 3 cut(s) 323, 989, 1296
BaeGI GKGCMC 1 cut(s) 1085
BaeI ACNNNNGTAYC 2 cut(s) 729, 762
BanI GGYRCC 1 cut(s) 25
BanII GRGCYC 1 cut(s) 244
Bbv12I GWGCWC 1 cut(s) 244
BbvI GCAGC 2 cut(s) 88, 220
BccI CCATC 8 cut(s) 37, 384, 595, 617, 698, 1298, 1428, 1432
BciT130I CCWGG 1 cut(s) 285
BciVI GTATCC 1 cut(s) 1313
BclI TGATCA 2 cut(s) 751, 847
BcnI CCSGG 1 cut(s) 138
BfaI CTAG 1 cut(s) 1419
BfmI CTRYAG 2 cut(s) 246, 515
BfuI GTATCC 1 cut(s) 1313
BisI GCNGC 5 cut(s) 102, 209, 768, 819, 1392
BlpI GCTNAGC 1 cut(s) 926
BlsI GCNGC 5 cut(s) 103, 210, 769, 820, 1393
BmcAI AGTACT 1 cut(s) 1283
Bme1390I CCNGG 2 cut(s) 138, 285
Bme18I GGWCC 3 cut(s) 323, 989, 1296
BmgT120I GGNCC 4 cut(s) 281, 323, 989, 1296
BmiI GGNNCC 5 cut(s) 27, 359, 888, 991, 1298
BmrFI CCNGG 2 cut(s) 138, 285
BmrI ACTGGG 1 cut(s) 677
BmsI GCATC 3 cut(s) 412, 829, 1051
BmtI GCTAGC 1 cut(s) 1422
BmuI ACTGGG 1 cut(s) 677
BpmI CTGGAG 2 cut(s) 548, 1306
Bpu1102I GCTNAGC 1 cut(s) 926
BpuMI CCSGG 1 cut(s) 138
Bsa29I ATCGAT 1 cut(s) 837
BsaAI YACGTR 2 cut(s) 796, 1190
BsaHI GRCGYC 1 cut(s) 402
BsaJI CCNNGG 2 cut(s) 283, 1353
BsaWI WCCGGW 2 cut(s) 146, 173
Bsc4I CCNNNNNNNGG 5 cut(s) 688, 986, 999, 1235, 1408
Bse118I RCCGGY 1 cut(s) 732
Bse1I ACTGG 5 cut(s) 171, 326, 683, 1143, 1289
Bse3DI GCAATG 4 cut(s) 790, 820, 825, 905
BseAI TCCGGA 1 cut(s) 173
BseBI CCWGG 1 cut(s) 285
BseCI ATCGAT 1 cut(s) 837
BseDI CCNNGG 2 cut(s) 283, 1353
BseGI GGATG 3 cut(s) 484, 1282, 1443
BseLI CCNNNNNNNGG 5 cut(s) 688, 986, 999, 1235, 1408
BseMI GCAATG 4 cut(s) 790, 820, 825, 905
BseMII CTCAG 3 cut(s) 225, 962, 1165
BseNI ACTGG 5 cut(s) 171, 326, 683, 1143, 1289
BseSI GKGCMC 1 cut(s) 1085
BseXI GCAGC 2 cut(s) 88, 220
BsgI GTGCAG 1 cut(s) 227
BshFI GGCC 2 cut(s) 282, 1383
BshNI GGYRCC 1 cut(s) 25
BshVI ATCGAT 1 cut(s) 837
BsiHKAI GWGCWC 1 cut(s) 244
BsiSI CCGG 4 cut(s) 137, 147, 174, 733
BslFI GGGAC 2 cut(s) 975, 1282
BslI CCNNNNNNNGG 5 cut(s) 688, 986, 999, 1235, 1408
BsmFI GGGAC 2 cut(s) 975, 1282
BsnI GGCC 2 cut(s) 282, 1383
Bsp1286I GDGCHC 2 cut(s) 244, 1085
Bsp13I TCCGGA 1 cut(s) 173
Bsp1407I TGTACA 1 cut(s) 607
Bsp143I GATC 5 cut(s) 129, 253, 751, 847, 914
Bsp1720I GCTNAGC 1 cut(s) 926
BspACI CCGC 5 cut(s) 465, 767, 819, 993, 1392
BspANI GGCC 2 cut(s) 282, 1383
BspCNI CTCAG 3 cut(s) 226, 963, 1164
BspDI ATCGAT 1 cut(s) 837
BspEI TCCGGA 1 cut(s) 173
BspHI TCATGA 1 cut(s) 1132
BspLI GGNNCC 5 cut(s) 27, 359, 888, 991, 1298
BspMAI CTGCAG 2 cut(s) 250, 519
BspOI GCTAGC 1 cut(s) 1422
BspPI GGATC 2 cut(s) 124, 248
BspT107I GGYRCC 1 cut(s) 25
BsrDI GCAATG 4 cut(s) 790, 820, 825, 905
BsrFI RCCGGY 1 cut(s) 732
BsrGI TGTACA 1 cut(s) 607
BsrI ACTGG 5 cut(s) 171, 326, 683, 1143, 1289
BssAI RCCGGY 1 cut(s) 732
BssECI CCNNGG 2 cut(s) 283, 1353
BssMI GATC 5 cut(s) 129, 253, 751, 847, 914
BssNI GRCGYC 1 cut(s) 402
BssT1I CCWWGG 1 cut(s) 1353
Bst2UI CCWGG 1 cut(s) 285
Bst4CI ACNGT 5 cut(s) 60, 896, 989, 1205, 1369
BstACI GRCGYC 1 cut(s) 402
BstAPI GCANNNNNTGC 2 cut(s) 539, 827
BstAUI TGTACA 1 cut(s) 607
BstBAI YACGTR 2 cut(s) 796, 1190
BstC8I GCNNGC 4 cut(s) 106, 823, 1381, 1420
BstDEI CTNAG 4 cut(s) 234, 926, 971, 1151
BstEII GGTNACC 2 cut(s) 149, 1208
BstF5I GGATG 3 cut(s) 484, 1282, 1443
BstKTI GATC 5 cut(s) 132, 256, 754, 850, 917
BstMBI GATC 5 cut(s) 129, 253, 751, 847, 914
BstMWI GCNNNNNNNGC 4 cut(s) 288, 523, 539, 827
BstNI CCWGG 1 cut(s) 285
BstNSI RCATGY 3 cut(s) 825, 1024, 1222
BstPI GGTNACC 2 cut(s) 149, 1208
BstSCI CCNGG 2 cut(s) 136, 283
BstSFI CTRYAG 2 cut(s) 246, 515
BstSLI GKGCMC 1 cut(s) 1085
BstV1I GCAGC 2 cut(s) 88, 220
BstXI CCANNNNNNTGG 1 cut(s) 390
Bsu15I ATCGAT 1 cut(s) 837
BsuI GTATCC 1 cut(s) 1313
BsuRI GGCC 2 cut(s) 282, 1383
BsuTUI ATCGAT 1 cut(s) 837
BtsCI GGATG 3 cut(s) 484, 1282, 1443
BtsIMutI CAGTG 3 cut(s) 164, 589, 1210
Cac8I GCNNGC 4 cut(s) 106, 823, 1381, 1420
CciI TCATGA 1 cut(s) 1132
Cfr10I RCCGGY 1 cut(s) 732
Cfr13I GGNCC 4 cut(s) 281, 323, 989, 1296
ClaI ATCGAT 1 cut(s) 837
Csp6I GTAC 6 cut(s) 26, 608, 897, 1239, 1282, 1399
CviAII CATG 9 cut(s) 409, 822, 1021, 1104, 1133, 1214, 1219, 1248, 1293
CviQI GTAC 6 cut(s) 26, 608, 897, 1239, 1282, 1399
DdeI CTNAG 4 cut(s) 234, 926, 971, 1151
DpnI GATC 5 cut(s) 131, 255, 753, 849, 916
DpnII GATC 5 cut(s) 129, 253, 751, 847, 914
Ecl136II GAGCTC 1 cut(s) 242
Eco130I CCWWGG 1 cut(s) 1353
Eco24I GRGCYC 1 cut(s) 244
Eco32I GATATC 3 cut(s) 668, 835, 944
Eco47I GGWCC 3 cut(s) 323, 989, 1296
Eco53kI GAGCTC 1 cut(s) 242
Eco57I CTGAAG 3 cut(s) 81, 565, 659
Eco91I GGTNACC 2 cut(s) 149, 1208
EcoICRI GAGCTC 1 cut(s) 242
EcoO65I GGTNACC 2 cut(s) 149, 1208
EcoRII CCWGG 1 cut(s) 283
EcoRV GATATC 3 cut(s) 668, 835, 944
EcoT14I CCWWGG 1 cut(s) 1353
EcoT22I ATGCAT 1 cut(s) 827
EcoT38I GRGCYC 1 cut(s) 244
ErhI CCWWGG 1 cut(s) 1353
FaeI CATG 9 cut(s) 412, 825, 1024, 1107, 1136, 1217, 1222, 1251, 1296
FaqI GGGAC 2 cut(s) 975, 1282
FatI CATG 9 cut(s) 408, 821, 1020, 1103, 1132, 1213, 1218, 1247, 1292
FauI CCCGC 1 cut(s) 1000
FauNDI CATATG 1 cut(s) 544
FbaI TGATCA 2 cut(s) 751, 847
Fnu4HI GCNGC 5 cut(s) 102, 209, 768, 819, 1392
FokI GGATG 3 cut(s) 491, 1289, 1450
FriOI GRGCYC 1 cut(s) 244
Fsp4HI GCNGC 5 cut(s) 102, 209, 768, 819, 1392
FspBI CTAG 1 cut(s) 1419
GluI GCNGC 5 cut(s) 102, 209, 768, 819, 1392
GsuI CTGGAG 2 cut(s) 548, 1306
HaeIII GGCC 2 cut(s) 282, 1383
HapII CCGG 4 cut(s) 137, 147, 174, 733
Hin1I GRCGYC 1 cut(s) 402
Hin1II CATG 9 cut(s) 412, 825, 1024, 1107, 1136, 1217, 1222, 1251, 1296
HinfI GANTC 7 cut(s) 170, 230, 306, 441, 575, 692, 739
HpaII CCGG 4 cut(s) 137, 147, 174, 733
HphI GGTGA 8 cut(s) 161, 203, 584, 800, 969, 1132, 1220, 1342
Hpy166II GTNNAC 3 cut(s) 968, 977, 1241
Hpy188I TCNGA 7 cut(s) 235, 600, 678, 751, 1058, 1076, 1183
Hpy188III TCNNGA 4 cut(s) 174, 374, 1007, 1133
Hpy8I GTNNAC 3 cut(s) 968, 977, 1241
HpyAV CCTTC 3 cut(s) 164, 589, 1366
HpyCH4III ACNGT 5 cut(s) 60, 896, 989, 1205, 1369
HpyCH4IV ACGT 4 cut(s) 219, 402, 795, 1189
HpyF10VI GCNNNNNNNGC 4 cut(s) 288, 523, 539, 827
HpyF3I CTNAG 4 cut(s) 234, 926, 971, 1151
HpySE526I ACGT 4 cut(s) 219, 402, 795, 1189
Hsp92I GRCGYC 1 cut(s) 402
Hsp92II CATG 9 cut(s) 412, 825, 1024, 1107, 1136, 1217, 1222, 1251, 1296
Kpn2I TCCGGA 1 cut(s) 173
KpnI GGTACC 1 cut(s) 29
Ksp22I TGATCA 2 cut(s) 751, 847
Kzo9I GATC 5 cut(s) 129, 253, 751, 847, 914
LmnI GCTCC 4 cut(s) 247, 357, 1029, 1376
Lsp1109I GCAGC 2 cut(s) 88, 220
LweI GCATC 3 cut(s) 412, 829, 1051
MaeI CTAG 1 cut(s) 1419
MaeII ACGT 4 cut(s) 219, 402, 795, 1189
MaeIII GTNAC 8 cut(s) 149, 191, 328, 626, 685, 1124, 1138, 1208
MalI GATC 5 cut(s) 131, 255, 753, 849, 916
MboI GATC 5 cut(s) 129, 253, 751, 847, 914
MboII GAAGA 5 cut(s) 44, 212, 301, 951, 1339
MhlI GDGCHC 2 cut(s) 244, 1085
MluCI AATT 6 cut(s) 346, 509, 805, 1015, 1088, 1264
MlyI GAGTC 2 cut(s) 239, 733
MnlI CCTC 6 cut(s) 267, 272, 523, 657, 1239, 1281
Mph1103I ATGCAT 1 cut(s) 827
MroI TCCGGA 1 cut(s) 173
MseI TTAA 5 cut(s) 62, 336, 590, 1334, 1456
MslI CAYNNNNRTG 3 cut(s) 388, 1000, 1246
MspA1I CMGCKG 1 cut(s) 101
MspI CCGG 4 cut(s) 137, 147, 174, 733
MspR9I CCNGG 2 cut(s) 138, 285
MvaI CCWGG 1 cut(s) 285
MwoI GCNNNNNNNGC 4 cut(s) 288, 523, 539, 827
NciI CCSGG 1 cut(s) 138
NdeI CATATG 1 cut(s) 544
NdeII GATC 5 cut(s) 129, 253, 751, 847, 914
NheI GCTAGC 1 cut(s) 1418
NlaIII CATG 9 cut(s) 412, 825, 1024, 1107, 1136, 1217, 1222, 1251, 1296
NlaIV GGNNCC 5 cut(s) 27, 359, 888, 991, 1298
NmeAIII GCCGAG 1 cut(s) 936
NmuCI GTSAC 4 cut(s) 149, 191, 1138, 1208
NsiI ATGCAT 1 cut(s) 827
NspI RCATGY 3 cut(s) 825, 1024, 1222
PaeI GCATGC 1 cut(s) 825
PagI TCATGA 1 cut(s) 1132
PciI ACATGT 1 cut(s) 1218
PfeI GAWTC 5 cut(s) 170, 306, 441, 575, 692
PflFI GACNNNGTC 1 cut(s) 1294
PkrI GCNGC 5 cut(s) 103, 210, 769, 820, 1393
PleI GAGTC 2 cut(s) 238, 733
PpsI GAGTC 2 cut(s) 238, 733
Ppu21I YACGTR 2 cut(s) 796, 1190
PscI ACATGT 1 cut(s) 1218
PsiI TTATAA 1 cut(s) 762
Psp124BI GAGCTC 1 cut(s) 244
Psp6I CCWGG 1 cut(s) 283
PspEI GGTNACC 2 cut(s) 149, 1208
PspGI CCWGG 1 cut(s) 283
PspN4I GGNNCC 5 cut(s) 27, 359, 888, 991, 1298
PspPI GGNCC 4 cut(s) 281, 323, 989, 1296
PstI CTGCAG 2 cut(s) 250, 519
PsyI GACNNNGTC 1 cut(s) 1294
PvuII CAGCTG 1 cut(s) 101
RsaI GTAC 6 cut(s) 27, 609, 898, 1240, 1283, 1400
RsaNI GTAC 6 cut(s) 26, 608, 897, 1239, 1282, 1399
RseI CAYNNNNRTG 3 cut(s) 388, 1000, 1246
SacI GAGCTC 1 cut(s) 244
SaqAI TTAA 5 cut(s) 62, 336, 590, 1334, 1456
SatI GCNGC 5 cut(s) 102, 209, 768, 819, 1392
Sau3AI GATC 5 cut(s) 129, 253, 751, 847, 914
Sau96I GGNCC 4 cut(s) 281, 323, 989, 1296
ScaI AGTACT 1 cut(s) 1283
SchI GAGTC 2 cut(s) 239, 733
ScrFI CCNGG 2 cut(s) 138, 285
SduI GDGCHC 2 cut(s) 244, 1085
SfaNI GCATC 3 cut(s) 412, 829, 1051
SfcI CTRYAG 2 cut(s) 246, 515
SinI GGWCC 3 cut(s) 323, 989, 1296
SmiMI CAYNNNNRTG 3 cut(s) 388, 1000, 1246
SphI GCATGC 1 cut(s) 825
Sse9I AATT 6 cut(s) 346, 509, 805, 1015, 1088, 1264
SsiI CCGC 5 cut(s) 465, 767, 819, 993, 1392
SspMI CTAG 1 cut(s) 1419
SstI GAGCTC 1 cut(s) 244
StyD4I CCNGG 2 cut(s) 136, 283
StyI CCWWGG 1 cut(s) 1353
TaaI ACNGT 5 cut(s) 60, 896, 989, 1205, 1369
TaiI ACGT 4 cut(s) 222, 405, 798, 1192
TaqI TCGA 3 cut(s) 388, 837, 937
TasI AATT 6 cut(s) 346, 509, 805, 1015, 1088, 1264
TatI WGTACW 3 cut(s) 607, 896, 1281
TauI GCSGC 3 cut(s) 770, 821, 1394
TfiI GAWTC 5 cut(s) 170, 306, 441, 575, 692
Tru1I TTAA 5 cut(s) 62, 336, 590, 1334, 1456
Tru9I TTAA 5 cut(s) 62, 336, 590, 1334, 1456
TscAI CASTG 3 cut(s) 171, 589, 1210
TseFI GTSAC 4 cut(s) 149, 191, 1138, 1208
TseI GCWGC 2 cut(s) 101, 208
Tsp45I GTSAC 4 cut(s) 149, 191, 1138, 1208
TspDTI ATGAA 6 cut(s) 50, 213, 522, 668, 894, 1149
TspGWI ACGGA 1 cut(s) 704
TspRI CASTG 3 cut(s) 171, 589, 1210
Tth111I GACNNNGTC 1 cut(s) 1294
VpaK11BI GGWCC 3 cut(s) 323, 989, 1296
XapI RAATTY 3 cut(s) 509, 805, 1264
XceI RCATGY 3 cut(s) 825, 1024, 1222
XspI CTAG 1 cut(s) 1419
ZraI GACGTC 1 cut(s) 403
ZrmI AGTACT 1 cut(s) 1283
Zsp2I ATGCAT 1 cut(s) 827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.